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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0250900 |
| Transcript ID | LotjaGi5g1v0250900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent RNA helicase, putative; TAIR: AT2G47680.1 zinc finger (CCCH type) helicase family protein; Swiss-Prot: sp|O22243|C3H31_ARATH DExH-box ATP-dependent RNA helicase DExH8; TrEMBL-Plants: tr|G7IF63|G7IF63_MEDTR Zinc finger CCCH domain protein; Found in the gene: LotjaGi5g1v0250900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:55920036..55929225) extracted from Lotus japonicus Gifu genome v1.2.
CACAACGTGTCATCATTCTCAAACCACGGCGATGATTGGTTAAAACAAACAACAGTCAACCCATAAAATAGAAAAATCGT TGACTTTCATTCAAGCTCACCTGGTCTCGCCCGTTCCGTATCACTTCCCATCTACTAGTAGTGACTCACTCACCCTTTTC TTCCCCACTCTTCACTCTCACTCTGAGACCGTGAGCGAGAGAGCGTGACGGTTTCTGTTTCTGAACCCTCATAATGGCTT CTCCGTCGCCATCGGACTCTTCTTCTCCACCGCCGGAGCCTAGTTTCTCTCACCTGCCTGTGATGTCTCTCCGGAGCAAG ATTGTTGAGAAGGTTCAGGAAAATCGCGTCACGCTCATCGTCGGCGAAGCCGGTTGCGGTATATTTATTTTTCTATAAAC TCCGCATTTTGAACTCGTTTTCATTTGCATGCTTATGTTTGATATTCCGTTGAACTTGCATTGACTTACTGTGTTGCCTT TACTGTACTGTGAAATTGCTCAAAATTACTCTCTGAAATACTGAAATTTTGCTTGTTGCGCTTCTCGTATAGCTTTCGTG TTCGTTTTCGCTAGTCTCGCTGGTGATCGTAGATTTATCACAGTCAATAATCTGGTGAATACTAATTTTTAGTTTCCAAA ATTTCTCGAATTTTTTTAAATTGTAAATTTGAAGAATAAGGCTGAGGCAATCGCTAGCTTCACTGAATAGAGAATATCAG ACATTCATGGAATTTCAGCTTAAGTACACGTTTGGTTTTCAGTACTGTTCCCAATGGATAAACGGAGAAATAAGATTTTG ACTAGTGTGAAACTTGTATCTATGTTGACAAAAATCCATCCAAACACAACCTAAGTTTGTAAGGAACTCTGGGAAACCAC TTTGGAATTGCAGTTCCTTTTGCTAGTGTATGTATTTCATATTTGCATGAGAAGTCAACTATGTTCTCTGATCACGGTTA TTTCATTACCAATTCAACTATGCCTTTTTTTTTTAAAAAAAAAACTTACCTTAAGAAAATGGCAATCATTACCAGCACTA TAAATTATTGGATTTTAGGTCTTTTTTCTGTGTGTGAGCGCGTGAGCCAGGGTTTTAAATTGTGATTTGCTAGCAATTGT GGCCGCATCAACCGGCAGCGGCAACCCTGGTCATATCAAACAAAGATGTTGTCTAAAACCGTTGAAATCTGGAGATGTAA AGGTTAGAAAATGGAAAAAGAAATAAAAGGCAAACTTCATGCAAATGTTAGAGAATATAAAAGTCCAGGAAGATTGTGAA CCTTTTACCTTCATAGATAATGCTGTATTATCTTCACCCCTTTATATATCATGAACAGGTTCTGCAAAAATCAAAATGGG TGTGCACAACTGAATGTAAGAATTGTTACTGCACAATGCACATCAATGCATTTATGTATGTGAATGAAACTTCTAGCTCG GTATCATTTGAAAGGAATATGGTGTACTTTGTACTTATTCGTCATTCTTTCCTTGTGGCTGATATTTCTGCTCTGTTTCC TCTCAAGGGAAAAGTTCACAAATTCCACAGTTTCTTCTCGATGAAAACATATCACCCATCCTGTGCACACTGCCTAGGAG ATTTGCTGTTGTTTCTGTTGCCAAAATGGTTGCACAAGCTCGAAAATGTCAATTGGGAGAAGAAGTTGGATATCATATTG GACACGAAAAGAACTTTTCAGCTAGGTATTCGAGACAAATATCACTGATATTTTTTATTTCTTGGCAAACTTTGTGTCAT AGTTATTTGATCATCACTTTCAGATTTTTGTGTTTCTTCATTTCCTTTGCAGATTTAAAGCCCTGATAAATTATATTGAG AGTAAATTTTGACTTGAATCTATAAGTGAGGCCTTGTCTGGCATCACTATGGATTTTTTTTTTCCAATAAAAAATACTTT CTTGATAAGGATGCAAGAATCTTATTACATGTATGTCTCATCTGATGACAAAAGTACACTATAACACATGCACCGTCTAA CAAAGTTAACAGTTGAGTTGAGTACACTGTCATTTGTCTAAAAAGCAATTTTAAGGAAGATATTTGGCAGTAATTTTCTT TTATATAATGGAAATATTGGATTTAGAAGGGTATTATTTGCCAAATATATTAACTAGTTTCTCCTTATAACAAAATTACA GTAGTTACTAACACTTGCATGATAATTACATGATATGATAAAGTTGACTGCATTGTCGTTTGTCATAGAGAAGCCATTTC AAGGAAGCAATAGGGAACTTATCCCATGCTTACTTTTCTTCTTGTATTTATGTTGTTATCACAGTTCAAAGATTGTTTTT AAAACTGCTGGAGTGTTGTTGGACGAATTGCAAGAAAAGGGTATGGCTGCACTGAAGTACAAAGCTATCATTCTTGATGA AGTACATGAAAGATCAGTGGAGTCTGATCTTGTCCTTGTTTGTGTGAAGCAGTTTTTGTTAAAGAACGACATAAGGTTAG CATCTTGGATATATAATTGTTCGGCAGAATTCCCTTTGTACAGATGTATGGCCAAGCTATCATTTTATTGCTTGATTCTT GGTTTATTTATTTATCCTGTTTGACATTCTATTCAAGTTCGAAAGAGTGAAGCGAGTATTGTTCAATGTGAATATTTGAA AAATAATACTTGTATTTTTCCAGATCAGGAGCGGTATATATAATTGGCTGTTTTATTGCAGCAATAGCATATGTTCCTCT AGTTACCGTGTCTTCCGAGTATTAGAGAATCCTAATCGAGAACTCTATTTACTTTCTTGATTGAAAACACTGCCTCTCAT TTCAATTTAAGAGGCAAGTAGTTGCTTTGTAGATCTAATATATATGATTTTGCAGGGTGGTTTTGATGTCTGCAACTGCT GATATTTCGAGATACAGAGATTACTTCAGGGATCTTGGTAGAGGTGAAAGAGTTGAAGTGCTTGCAATTCCTAGCTCAAA CCAGAAAACTGTTTTTCAGCGAAGAGTTTCATATCTTGAGCAGGCATGCATATATACTCTACTAGATTTTCTTTCTTTTT TATTTCACCCCACCTTTATACCAGTTTTCTATATCTTATCAAAGTTACATATATTGAATGGTTTTAAATTCATGCTTCAT CTTTAAAATCATTTTGGGTACAAAATAAATGTACGTTTGAAACATTCATGGTCCATACGCTTTCTTATATCCTGCATGTG AAAGCCAGCTGTTCTTCACATAAATTACTGACTAGAGTTGAGTTTCTATATGAGTAACAATGACAACAATGATAAATCTA TATAGGTCTTATTGCACCTTTGTATTTAGTAAAACTACTCTATATAAGCAAAACTAAAGTACAAAAGGTTTTTAGCATCT CTATGTTCATGGACTTTGAAGTAGTACCACATTTTTATTGATGGGTAGAAGTATTAGTTAAATATATTTATAAGTTTGCT TGTTTGTGTCTTCTTAGTTATTTATGGGATGGGACTATGGTAATGAGAATAAAACAATTGAAATAAAAAAAATATTCCCA TGCTTTTTTTCCAATAAGAGGCTAGGGATCACATCCATATTAATATGTTCAGGAAAAAGTGAAAATACAGAAAATAGTTG AGTGATTCAGTGCAAGTCAAAGAATAGAAGCTTTTCCTGTCATATATTATTATGCATGACAAAATATGATTCTAATCAGT TGCACACCACGTCATTATGTTTCTGAAACACATTTCATGTATGTGATAAGTGATATGATGCTAATGCAATGTTCTTTGAA CAGGTAGTTGAATCTCTTGGGATAAGCTCTGAATTAATGCATTCAAAAAATTCGCATGGTCTAAATCCTTCCACAGCCAA TGCTCGAATTAAGTCTGAACTGCACACACTTATTCATGCACTGGTGTTGCATATTCATGTGAATGAGCCAGATATTGAGA AAAGCATTCTAGTTTTCCTTCCAACCTACAATTCACTGGCACAGCAATGGCGCCTTCTGAAGCCACTTGAATCAACTTTT GAAGTTCATATCTTACATCGTAGCATTGATACTGAACAAGCTCTCATGGCTATGAAGATTTCGAAGACACATCGAAAGGT TTTGTTCATTAATTCAGCCAGTTCTGTTGTTAATCATGGGTTTTTTACTTATGGAGGGACACACACACACACACACACAT TTGTGTCATTAATTGTTTGTGTTAACGTTATACACTATTAATTTATGAATCATTATTTTATTTTAACTGGAAAAAGTTCT CTCTGTCAATGGTAAATCTTACTTTTGCAAATTGGCTATTATTATGTTGAACATCTATATTTGCTGCAGAAACTTATTAG TTTTATTGTATTGTAAATTGTAAGCCACAACAATTGTTATGAATTCTTAATGTGCAATATTTAATCATGGCATGTATTTA ACTTGTAAATATATATAAGATATCTTTGCTGATTTGTTCCTTTAATCTTGATGTTTCTCTTAGTTCCCTTAGGCAGGTTA GAAAATTTTACTTTGAGAAGATTTGTTACTTCTAAAATTATTTTTATTGATATATTTTCTACTGAAATTATTCACATTCG ATGATTGTGGTTGTTGTCTGTCAGGTAATATTGGCTACCAATATTGCTGAATCATCTGTGACAATACCTAAAGTGGCTTA TGTCATTGATTCATGCCGATCATTACAAGTCTATTGGGATAAGTCTCGAAAAAAGGAAGCTTCAAAGCTTGTTTGGGTTT CCAAGTCTCAGGTACAAATTGTCTTATTCCTATATGCCGATTTGTTTTTATATTTTCTTAGTTTCATATGATTTTGTAGG CTGAACAACGTAGAGGAAGAACTGGTCGAACTTGTGATGGCCAAGTTTATAGGTTGGTTACAGGATCGTTTTTCAACAGT CTTGAGGATCATGAGTGTCCAGCTATTCTTAAATTATCATTGAGGCTGCAAGTTCTTTCTTCATGTTGTGCTGGATCTAA GGCTATCAATGATCCCAAAGGCAAGTTCATATAATCCTGATTTCTTGGCTGAAAACAATTTTACTATTAATTGCTTACTT GAGTAAAATTTTGTACCCAATAACATTTTGAATGTCTGCATACATTTTAAATGTAACAATGATCTCTCTTAATAATTTTG GACGTACGCTAAGAAACTTCAGGAAGAGGCTATCAATTTGACTTGAAATATATGTCTGTTTAAGCTTATTTTTGCTATTC AAGACTGGTAGTCTGCTACTACTTGGTGACATCACATTGAGTGAACATATGTAAGGTATAGCGCTTATATGTAGTTTTTG AGTTTATTTATTCCATTTTGTTTACATATTAGAGTGGGCGATAACTTGTAACTGTCAGTAAAATACCTTTTTTTAAAATG TTGCAGTGTCAAAGTCTTCAAAGAAAATATATTTATGTACCAATGCATTGTTCATCAGAGTAAATGTAGAGCTTAACTGG TGAGAATTTGATGACTTTTAATACAACTAACTGTCATGAGAAAGTAGGCTGAACTTGTTCCGTGGTGTCTTGGAGGATTT CTTAATAGGAGTAGCCAGTAAACTGAATGTATTACTGCAGGGTGTACTGTTTTTTGCTCTATTTTGTGCATCTAATCTAT TGAGACACTATATCAAACTCCACTAGTGTCTTATGGATGCAATCCTTGTAACTTATGAGGTGTATGATGGGAAACATCTT AATATCATGATGCCTTCAACTGTTAAATGGATATAGGTATACTATTTTCTTATAACTCCGCTAGTGTCTTATGGATGCAA TCCTAGTAACTTATGAGGTGTATGACGGGGAACATCTTAATATCATGATGCCTTCAACTGTTTAATGAATATAAGATAAT TAAAAATCACTTCACAAACTCTATTTTTATTGCATAATTTACATTTTTGTAAAAATTGCAAAAGCTTGTCCAATTACGTA TAATTATCTTTTCTTTCTGTCTCACTCTTCCTTTTTTATTAAAAGAGGAATCTACCTCCATGCCATTACAGAAAGAAAAG ATAATTATACGTAATTGGACAAGCTTTTGCAATTTTTACAAAAATGTAAATTATGCAATAAAATTAGAGTTTGTGAAGTG AACTTATGAGTATATTACCCTGTTTGATGGGTTCCATACTTTGATGGCAGTTCTGTTGCAAAAAGCTCTGGATCCCCCGG ATCCTCAAGTTGTTGAAGACGCACTGAGTATGCTTGTTCAGATGCACGCACTAGAAAAGACAACTCCAAGGGGCCGTTAT GAACCTACATTTTATGGACGATTACTTGCTAGTTTTTCTTTGTCTTTTGATGCTTCTATTCTAGTCCTGAAATTTGGAGA GATTGGTATGCTACGTGAGGGCATCCTGCTGGGTATAATTATGGATACACAGCCTTTACCCATTATTCATCCATTTGGCG AGGATGAATTGGTAATATTTAGTGTTGAACCAGCTTTACTATTTCTGAATGCTCTGATTCTTTGGTAACTTTATGAGCCT CAACTCTTCTTGTAACTGGATCTTTTTATTTTCATCAGTTTTCGAGGTACATTGATTGCTATTATGATGACAAAATAATT TTAACTGGTCCAAAGGAGATGGAATTCATGGGTAACTTCTGTGCATTTGAGTTTTGGCAGCATATTTTCAAGGTAAAGTT GTATCTCTTTGCTGGTTGTACTATCAAATGTATTGGCATTATTCAGTATCTGCATGAGGCTTCACAGTGAAAGTTGGTAG AAAAAACATTGTGAAATGATGCTTATTCATTGCAGGAGTTTTATTTATTGCTTACCAAACAGTGTTCTTGTTGTGCGGGA ATAATACACTTAATTAGAGGGTTGCTTCCTCATGGGTTTCTGTGAGACCTGTACATGAGGAACACGAAATAGTAATGAAG TGAAAGAAGCCACATCTTTCCTGGAAATGAGATTTGCGTTTTATGTTTGTATAAATAGTGTGAAGCTTGCAGTTATATGA ACTTGATGATGAAAATGTTCTTTTGATATGCAGGATAAGTACCGGCTTGAAAATTTGAAGAAGATTCTAAAAACTGATAA TGTATATCCTGCCACACAATCAATGCGTCTTGAGGAAGAAGATTGGTGTTCTTTCCATAATCTCTCCCAATCATCTTTGC ATCATGTGTCAGAAATTTGTACGTATCTGCATAATAATTCTCAGAATATGTATTCTACATTTTGTGTGAGTGTTATTTTT CTTAAATCTTTTAACAACCCTTAATTCTGATCTTACAGATAATGATATACTGCATTCAGTACACCGGTTCCGGCCAAATT TTTTGAGCTCCTTTCATGGCCTACCGCCCTATTATGATCCTTATGAATTCAAGCACACATGCCTGCTCAAAGGTCAGCCA AATGGACATATAGATGCAGTTGCTGCGGATGAGGACTTCGAACCATCAAGTGAAACAAAAAAATGTGTTGCTGTACCATA TGTTACTTCAAACCACTTCCACAGTTCTGATGTGGCAAAAATGTTGGCTACAGTTATAAAAGAGGTAGTATATTTTGGAT TTCAAGTGTTTCTAACTTTCTATAGAAAAAAAAATCCATTTTCTAAAAAAGGACGGGTTTTCCTTTCTTGCATGAAACAG TTAAGAGTCCAATACCCAGATGATGCTTCTAGCCATCAACCAGACGGTGTTGATTTTGATAATTTTCACGTCAATGAGGA GACTTGTGTATATTTTATTCGAGGGTCCTGCAATAGAGGCAATTATTGTCCATTTTCTCACTCACTTCAAGCCAAGAGAC CCCAGTGCAAATTTTTCCTTTCATTGCAGGTAATTTGTTTGTTTGAGTTAGATTTCATTATATTTCTACCATTACTAAGA TTATGATTAGTATTCATCTTGACAGGGTTGCCGAAATGGGGAGTCTTGTTTATTTTCACATGTTACGGGTCGATCAGCAC CATCAACTAGTACAAATGTATGCCAGCCAGAAGATAATGACGTGAATGCTGCATCCCTTCTAAAGTGGTTTCCCAGATCA ACCAACAGATCAATTCTTATATTGGATGACACTGATTTGCATTTCACTTCATGTCTCGCTCGCTACTATGATCCATCCAA AATAACTTCAACTACATGTTTGTCAGAAACAACCATAACAGAATCTTCACTACCCAGAGCCAGAATTTTGTGGGGTCTAT ATCACCCATACCAAACAATCATTGCCAAAGCTGGGCAGACCCTTATTCCTTGGAATGAAGTTCAATGTGTACTGTGGTTT CCTTCCTTTGATAGCTATGGTGATGATTTGGATGGAAAAAAGCAGCTCTTGCAGAACTTCTTCGAATATCTCGCCATTCG AATTCTGGCTGATGATTTGCATGAGGTGCAAGTTATCATAACCATGAATAATATCATATTTTCCCAACTTCAGGTGATTG CTTACTATTTAATAGGTTATAAAATAAGTGCTATTATGTTAGACACTGATACTGAATGTTATACACGTCTCCTAATATAT GCGGAACTCATGATGCTACCTTTTAATATCATTGTGGTAATGGTATTATCTTACTGAATGCAATGTTGTGATTTCAGGTA GAAAAGTTGGGCAGGGAGAGTTTCTTTATCCTCACAGAGTCCTTTGCTTTTGACGAAACAAGCTTTGGGGAATTACATGA TGTAGTTACCCCTAGGAGGCCAATGATGATATCAAGGGCCACCTCATATGTTTTTAGCCTGCTTCCTGCCAGTGACAAAC ATTTCGGTGACTACGCTGCTACTATCAAAAAGCAACTGCATGAAATTCAAACAAATTAACTATGGGGGGTGTATATGTTT GACCCTTCTGGAGGCTTAATAACCCAGTTCTAGGGTTTTTTTATGTTCGAGTTCTAGGTTGATATTGAACTGCTGAAATT ATGTAGTCTGTACATGCATAGTGCTTTCTTGAGATAAGCTTTTTGAAATTCTGCCGTATAACTTATGGTGGGTATGGAAT AGTTTACTTTGAAGTTATGTTTTATAGTACCAGGTGCTTGGTTGAATTTATGAAAATAATTTATGGCATAGGTGGAAAGA CCTAGAGGTTACCATTATCCAGAGCTGTTTTTTTTTTTTTATATATATATATATTTTTATCAATAATAGCTTTGTGTTAA GCTACGCAATCAGCACGTTGTTTGCCCTTTCTTAATGTCAAATGTGCTCAAAATTGAGAGACTAGTTTCT
CDS sequence (LotjaGi5g1v0250900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCTCCGTCGCCATCGGACTCTTCTTCTCCACCGCCGGAGCCTAGTTTCTCTCACCTGCCTGTGATGTCTCTCCG GAGCAAGATTGTTGAGAAGGTTCAGGAAAATCGCGTCACGCTCATCGTCGGCGAAGCCGGTTGCGGGAAAAGTTCACAAA TTCCACAGTTTCTTCTCGATGAAAACATATCACCCATCCTGTGCACACTGCCTAGGAGATTTGCTGTTGTTTCTGTTGCC AAAATGGTTGCACAAGCTCGAAAATGTCAATTGGGAGAAGAAGTTGGATATCATATTGGACACGAAAAGAACTTTTCAGC TAGTTCAAAGATTGTTTTTAAAACTGCTGGAGTGTTGTTGGACGAATTGCAAGAAAAGGGTATGGCTGCACTGAAGTACA AAGCTATCATTCTTGATGAAGTACATGAAAGATCAGTGGAGTCTGATCTTGTCCTTGTTTGTGTGAAGCAGTTTTTGTTA AAGAACGACATAAGGGTGGTTTTGATGTCTGCAACTGCTGATATTTCGAGATACAGAGATTACTTCAGGGATCTTGGTAG AGGTGAAAGAGTTGAAGTGCTTGCAATTCCTAGCTCAAACCAGAAAACTGTTTTTCAGCGAAGAGTTTCATATCTTGAGC AGGTAGTTGAATCTCTTGGGATAAGCTCTGAATTAATGCATTCAAAAAATTCGCATGGTCTAAATCCTTCCACAGCCAAT GCTCGAATTAAGTCTGAACTGCACACACTTATTCATGCACTGGTGTTGCATATTCATGTGAATGAGCCAGATATTGAGAA AAGCATTCTAGTTTTCCTTCCAACCTACAATTCACTGGCACAGCAATGGCGCCTTCTGAAGCCACTTGAATCAACTTTTG AAGTTCATATCTTACATCGTAGCATTGATACTGAACAAGCTCTCATGGCTATGAAGATTTCGAAGACACATCGAAAGGTA ATATTGGCTACCAATATTGCTGAATCATCTGTGACAATACCTAAAGTGGCTTATGTCATTGATTCATGCCGATCATTACA AGTCTATTGGGATAAGTCTCGAAAAAAGGAAGCTTCAAAGCTTGTTTGGGTTTCCAAGTCTCAGGCTGAACAACGTAGAG GAAGAACTGGTCGAACTTGTGATGGCCAAGTTTATAGGTTGGTTACAGGATCGTTTTTCAACAGTCTTGAGGATCATGAG TGTCCAGCTATTCTTAAATTATCATTGAGGCTGCAAGTTCTTTCTTCATGTTGTGCTGGATCTAAGGCTATCAATGATCC CAAAGTTCTGTTGCAAAAAGCTCTGGATCCCCCGGATCCTCAAGTTGTTGAAGACGCACTGAGTATGCTTGTTCAGATGC ACGCACTAGAAAAGACAACTCCAAGGGGCCGTTATGAACCTACATTTTATGGACGATTACTTGCTAGTTTTTCTTTGTCT TTTGATGCTTCTATTCTAGTCCTGAAATTTGGAGAGATTGGTATGCTACGTGAGGGCATCCTGCTGGGTATAATTATGGA TACACAGCCTTTACCCATTATTCATCCATTTGGCGAGGATGAATTGTTTTCGAGGTACATTGATTGCTATTATGATGACA AAATAATTTTAACTGGTCCAAAGGAGATGGAATTCATGGGTAACTTCTGTGCATTTGAGTTTTGGCAGCATATTTTCAAG GATAAGTACCGGCTTGAAAATTTGAAGAAGATTCTAAAAACTGATAATGTATATCCTGCCACACAATCAATGCGTCTTGA GGAAGAAGATTGGTGTTCTTTCCATAATCTCTCCCAATCATCTTTGCATCATGTGTCAGAAATTTATAATGATATACTGC ATTCAGTACACCGGTTCCGGCCAAATTTTTTGAGCTCCTTTCATGGCCTACCGCCCTATTATGATCCTTATGAATTCAAG CACACATGCCTGCTCAAAGGTCAGCCAAATGGACATATAGATGCAGTTGCTGCGGATGAGGACTTCGAACCATCAAGTGA AACAAAAAAATGTGTTGCTGTACCATATGTTACTTCAAACCACTTCCACAGTTCTGATGTGGCAAAAATGTTGGCTACAG TTATAAAAGAGTTAAGAGTCCAATACCCAGATGATGCTTCTAGCCATCAACCAGACGGTGTTGATTTTGATAATTTTCAC GTCAATGAGGAGACTTGTGTATATTTTATTCGAGGGTCCTGCAATAGAGGCAATTATTGTCCATTTTCTCACTCACTTCA AGCCAAGAGACCCCAGTGCAAATTTTTCCTTTCATTGCAGGGTTGCCGAAATGGGGAGTCTTGTTTATTTTCACATGTTA CGGGTCGATCAGCACCATCAACTAGTACAAATGTATGCCAGCCAGAAGATAATGACGTGAATGCTGCATCCCTTCTAAAG TGGTTTCCCAGATCAACCAACAGATCAATTCTTATATTGGATGACACTGATTTGCATTTCACTTCATGTCTCGCTCGCTA CTATGATCCATCCAAAATAACTTCAACTACATGTTTGTCAGAAACAACCATAACAGAATCTTCACTACCCAGAGCCAGAA TTTTGTGGGGTCTATATCACCCATACCAAACAATCATTGCCAAAGCTGGGCAGACCCTTATTCCTTGGAATGAAGTTCAA TGTGTACTGTGGTTTCCTTCCTTTGATAGCTATGGTGATGATTTGGATGGAAAAAAGCAGCTCTTGCAGAACTTCTTCGA ATATCTCGCCATTCGAATTCTGGCTGATGATTTGCATGAGGTGCAAGTTATCATAACCATGAATAATATCATATTTTCCC AACTTCAGGTAGAAAAGTTGGGCAGGGAGAGTTTCTTTATCCTCACAGAGTCCTTTGCTTTTGACGAAACAAGCTTTGGG GAATTACATGATGTAGTTACCCCTAGGAGGCCAATGATGATATCAAGGGCCACCTCATATGTTTTTAGCCTGCTTCCTGC CAGTGACAAACATTTCGGTGACTACGCTGCTACTATCAAAAAGCAACTGCATGAAATTCAAACAAATTAA
Protein sequence (LotjaGi5g1v0250900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASPSPSDSSSPPPEPSFSHLPVMSLRSKIVEKVQENRVTLIVGEAGCGKSSQIPQFLLDENISPILCTLPRRFAVVSVA KMVAQARKCQLGEEVGYHIGHEKNFSASSKIVFKTAGVLLDELQEKGMAALKYKAIILDEVHERSVESDLVLVCVKQFLL KNDIRVVLMSATADISRYRDYFRDLGRGERVEVLAIPSSNQKTVFQRRVSYLEQVVESLGISSELMHSKNSHGLNPSTAN ARIKSELHTLIHALVLHIHVNEPDIEKSILVFLPTYNSLAQQWRLLKPLESTFEVHILHRSIDTEQALMAMKISKTHRKV ILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKEASKLVWVSKSQAEQRRGRTGRTCDGQVYRLVTGSFFNSLEDHE CPAILKLSLRLQVLSSCCAGSKAINDPKVLLQKALDPPDPQVVEDALSMLVQMHALEKTTPRGRYEPTFYGRLLASFSLS FDASILVLKFGEIGMLREGILLGIIMDTQPLPIIHPFGEDELFSRYIDCYYDDKIILTGPKEMEFMGNFCAFEFWQHIFK DKYRLENLKKILKTDNVYPATQSMRLEEEDWCSFHNLSQSSLHHVSEIYNDILHSVHRFRPNFLSSFHGLPPYYDPYEFK HTCLLKGQPNGHIDAVAADEDFEPSSETKKCVAVPYVTSNHFHSSDVAKMLATVIKELRVQYPDDASSHQPDGVDFDNFH VNEETCVYFIRGSCNRGNYCPFSHSLQAKRPQCKFFLSLQGCRNGESCLFSHVTGRSAPSTSTNVCQPEDNDVNAASLLK WFPRSTNRSILILDDTDLHFTSCLARYYDPSKITSTTCLSETTITESSLPRARILWGLYHPYQTIIAKAGQTLIPWNEVQ CVLWFPSFDSYGDDLDGKKQLLQNFFEYLAIRILADDLHEVQVIITMNNIIFSQLQVEKLGRESFFILTESFAFDETSFG ELHDVVTPRRPMMISRATSYVFSLLPASDKHFGDYAATIKKQLHEIQTN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | - | – | |
| Gene3D | 6 | 198 | 193 | 5.3E-58 | – | |
| PANTHER | 10 | 1008 | 999 | 0.0 | – | |
| PANTHER | 10 | 1008 | 999 | 0.0 | – | |
| SMART | 19 | 207 | 189 | 1.4E-17 | ||
| Pfam | 29 | 174 | 146 | 1.7E-5 | ||
| ProSiteProfiles | 31 | 191 | 161 | 17.576 | ||
| SUPERFAMILY | 35 | 390 | 356 | 4.41E-39 | ||
| CDD | 37 | 182 | 146 | 1.59562E-59 | – | |
| CDD | 205 | 388 | 184 | 2.08009E-44 | – | |
| Gene3D | 237 | 399 | 163 | 3.3E-37 | – | |
| ProSiteProfiles | 250 | 436 | 187 | 10.673 | ||
| Pfam | 261 | 379 | 119 | 1.6E-12 | ||
| SMART | 277 | 380 | 104 | 8.3E-11 | ||
| Gene3D | 716 | 797 | 82 | 7.4E-13 | – | |
| SMART | 720 | 746 | 27 | 2.9E-4 | ||
| SUPERFAMILY | 721 | 745 | 25 | 4.71E-5 | ||
| ProSiteProfiles | 721 | 746 | 26 | 10.277 | ||
| ProSiteProfiles | 747 | 775 | 29 | 13.835 | ||
| SMART | 748 | 774 | 27 | 0.56 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi5g1v0250900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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