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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0258200 |
| Transcript ID | LotjaGi5g1v0258200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins); TAIR: AT1G55750.1 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins); Swiss-Prot: sp|Q3ECP0|TFB1A_ARATH Probable RNA polymerase II transcription factor B subunit 1-1; TrEMBL-Plants: tr|I1LCH7|I1LCH7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0258200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:56668676..56680028) extracted from Lotus japonicus Gifu genome v1.2.
TGGTTGATTGATACATATTTCATCCGGTAGTGTCAATATTCTCAAAGCAGCTATTGCTGCTCTTCTCTATCGCTATCGGA TCAACGCCCCGGAACTAGGCCGCGCCACCACCGGCGATTCCGCGATTCCGCTCATCCTCAACCCCGATAATCCAATTCCT CTTCATCACAAAAATCAAAATAACGCGATTCCCTCGTTCCCACTCCTCACATTGCGAAGTATAGTTCCTCGCCACTTCCC CTAACACCACCGCAATTGTGGTTCTGATTCGCGATTGATCGGAAAAACCTGTTTATTGAACTGTTTGCGGAATCGGATCA TCACGGTGGTGGTTGCGGTGGCGGTTTAGGTTTTAGGTTATGTCGTCTGGGCAAGTGGTTAAGCGTGCCAAATACAAAAC CACCGTGAAAGGTCCTGGCACTCCTGGTATTCTCAAATTGGTACACTCCCCTTGAATCATTCAACCAATTCCATTCACAT TCTCATTGCAATTTTCAATTCTTTTGAATGTTTGTCACTCTTTCATAGAATCTGGGTTTCTACTCTGCAGACTCAAGATA AGTTTGTTTTCAAGCCTAATGATCCTACCTCAAACAACAAGCTCGACGTCGAGTTCAGATTTATAAAAGGTACTTAGAAG TTAGAACTGATTGTGAAATTTCCAATTTGAAGCTTGAAAATCTGTTTCAGACTCTTTTTGATATCATATGTGCATCCTTT GATGTTGTTTCTTTTGTTCTGTTTGACAAAAAATTAGGTCATAGAGTTACGAAAGAGGGATCGAAACAACCGTTGCTTAA CCTTACCCATGCCCAGGTTTTTCTTTTGATTCTACATTTATTGTGTTATTTATGCAGCCTGAATGTTGTGCTGGTTTAAA TGGTCATTTGAATTTTCATGTACTATGGTTCATTCGTTTATTAGGACAACACTTAACATCATTATTGTTGTATCTGCTTT TCCTTTGAAATGAACTTTTATGATATTACAATGTGATGTTTCAGGGAAGTTACATCTTTGAGTTAGAAAGCTTTCCAGAT CTTCATGTTTGTCGGGAGTTGGTGGGTGAGTTTCTTGCTTTGGCTACTAGTCTACTACCATATGTTGTTGTTCCTTTTTC CTTAAACTTCTCTTCTAAGGGGTTATTGAGCATATGCTTTCTTGTTTTTCGTGAATTGTTGCTCACTGGAGTTTAGTTTA AGGTGCTGCTCTGTGGTTTACTTGTTTGACCTTAGGCTTAAGTTTCAAAGTTAGACTTTTTTACGGTAGGTTTTTAATTG TTTAAGGGCTCGTTTGGCACGCCGTATTAGGCATGATAGTATAAGCTTATACAATACATTATGAGTTTATCCATTGTTTG GTGATGACATTGTATTGTATAAGCTTATCCATCAAAGTCCCCTTATACGTTAAAATGACGTATTATTTAATCCATCATGT GAGTGATGGATAAGACATGATAAGGTTGCGACGTATAAGTCACCATCACCACCACCCTCTATTGCTGCCAACTTACACCA CCATTGGCACCACCACCACCACCACCATCCGATCACCGCCGCCGCCGCCACCACCGCCCTACCGTCACCACTGGTGTTGC CACCACCACCACCACCGCCGCCCTACCGCCACCACCACCATAATCGCCGCCACCACAACCTTATCGCCACCACCACCATA ATCGCCGCCACCACCGACACCACAACCACCACCCTATCGCCACCACCACCACCACCACCACCATTGCCTCCACCCTCCAC CGTCACCACCACCCTACTAAGCCGCCACCGCCTTACTACCACCACCACACTCTATCGTCGCCAACACCACAACCACCATC GCTGCCACCACCGCCACCACCGATGTTGCCGCCACCGCCCTACCGCCACCACAACCACCACCCTATCGCCACCACCACCA TAATTGTCGCCACCACTCTATTGCCACCACCGACACCACAACCACCACCCTATCGCCGCCACCACCACCACCACCACCAT TGCCTCCACCCTCCACTGTAGCCGCCACCGCCTTACCACCACCACCACCACCCTATCATCACCACCACCACAACCACCAT CGCTGCCACCACCACCACCAACCTATCTCCACTGTCACCACCACCGCCACCAACACCAACCTACCACCATTGCCACCACC ACCACCAACCTACCACTACTTCCATCACCACCGCCACCACCGTTATAATCACCTCCATATTTGATTTTTATTTTATATCA TTATTCAATACTTCATTAAACATAAAATTGCATTAATTTAAACGATATGGTAAATTATACAGTGTACGTCCAAACGCTGG ATAGTATAAGAAAATTATCAGGGCTTATACTATCAGGCCTAATACTATCAGGCCTTATACTATCAGGCCTTATACTATAC GTCGCACCAAACGGGCCCTAAGTATGTCTAAACTTTTATGAAATTTCAAATGTTGCAATATATATTTAGTTCCCTCATCA TATGTATGCCAAAGACGAAAAGGCTATGCTTCACCAAATAGTTCAATTCCTGAAGAATTAAGTGTATTTCCTCCCTTTTA TTGATTTTTCTAATGCAATTATACTTGGGATTTGATATATGAAACAATGGTATAAAATCAATATGAAAAGGAGATTCCGA CTTATCAGAATTTCTCTTTTATTCCAGTTTTAATACTTTTATTGTCAATTGTTTCATATATGCTTTCCTAATGTGTTGTG GTATGTCTGAGCAGGTAATGCCCTTAGCAAGCATGTAGAAGCTCCAAAAGTTACTACTGAGGAACAGCTTAGCACTGCTG AACTGACACTCAGGTTGAAACTATTGCAAGAAGATAGGTATTTAGTTTTTTAATAATGTACCTTAATTCTTTCAAAAGGA TGTATTCTTCATTAGTGATCTTGTTCTATTATGGCCCAATTTCTTGTTGCAAATGTAAACTATGGCCAAATTTCCGGAGA CCATTTAAATCAAGGTCTCTTTTGTATTGTGTTGTTACTTCGAAAGTATCCATTTATAGTTGCTCCATCTCAGAATGCCT TGCAGAAGTAATTTACTCAGGATCTCATTTTATTCATATAATAAGGTTTTGAATGTTGCATTTTATTTACTAAAAGGTTA TCTTTGTTTCAGATATTCTGCACTTTAGCTAATTTACAACTTTTGCAGTAAGTTGCAGAAACTTTTTAAGGAACTCGTGG CTGGTGGTAAGCTTACCGAATCAGAATTTTGGGCTACAAAGAAGGTAAAGATTTTCTGATCACCATACTACATAATGTAT TGTTCTTAGTATTTGCACATTGTTTTCAAATGGCATTTGATTATTAAAATCTGATGATGCCATTATATATATTTCCTAAT CTTAGATGGTTGATATTATGCCTGATTGGAAGAATTTTTACTCGGAAAAACTAAAAAGTACAATTTAATGTATTTTGCTG ATCTAATGCTTTCTGAAGTACATGGTCTTCATTTCCCCAATAGATTGGCAGAGGGATTGGGCAGCTGTTTTGATGTTTTC TTTTTGTTATTTTAATATGGAGGATATGTTAGCGTCCAATTTCCATGTAATTTTCATCGCCTCATCTTCTTTAATTTGTT ATTTTATATTAAAACATATTTTACAGAAAATGCTGGATCAAGATGAAAGCAGAAAGTCAAAACAACGGATTGGTTTTAAA AATTCTTTGATCTTTGACACAAAGCCTACTAGTGATGGTCGGGTATGATCCTACTTTTCCTTTATCTTCTGCATTGGTTA TATATCTTTCTGTTTGCGCTTAGATGTGTAGCTGTATAATACTTTGTTGTCATTATGAGGATATCGTATATCTAGCTGCT TGTATGTTATTGTAAGGGGAAAAAATTCTTATTCTCCTTCCCTGTTATCGAATGCGGAATTCAGCTTTAGAAGCTTTTTA ATGCTTAGCAGTACTATACTGTGACAAATGGGCTTTGATCATGATGAATGTGGTTTTTATTTTGTAATATAGTTCACAAA AATAATTTTCAAAAACTGAGTATATAAAATTGTCTTTCTGTAATTTACTGTAGAAACATAATTCAATACTAATAAAATAA GCAACTTTATTTGAGAAAAAGAATTCTGTAACTCTGTTCTTACGAGTAAATCTGTATGATGGTTATTACCCTAACTTGTT GCTGTATTTTAAAGATTTTGGCAAAATGTAAACCACTAAAAGCAGCAGCTACCCTGGATGACGTCGCTAACACGCCGTGG ATCAATTTACAATTTGACTTTCATAAAGAACAAACAAGATTATCGGATTAATTTAACAGATTTCTGCTAATGAACTTTTA TATTTACTTGCCAAAGCCTGTTCTGTTGTAGTTGGAGAGCCCAAAGCCTTATAAACCCCACATTAGAATCCCATACCTCC AATGTGGGACTCAAGTCCTACCTTGCAATTGGTTGGGTCCTAACATCTTGATTTTAATAATTGAGAACAATTTGTATTTT TATATTTGGCGTTTAAGAGTTCAAACTTGTTTTTAGAAATGGTAGTAAGAAAGGTACATTTTTTTTTTCATATTTGTTCT TCAAGTTGTTTCTTTAAAAGATAACCAGACAAGCCCTGTATTAATTTTTTTTCTTTCAATCTTTTGTACAATGGTTTAAT AAACCGAATAGCATCATCTGATTCATGATGCATTTAGTCAACCAACTTAGTGTGATAAGATTTGCTTATTGTTATTTAGA GTTTACACATTTTTAAATCCAGGTTTAGGATCTTTTAGCAGTTTCTGGACTTCTTTTATTTATTTGGTTTCAGATGCATG CATATGCAATTACGACTGATTTATTTTCTCTTGATTTATTTTCAGATAAATCAGGTTAAATTTCAGTTGACACCAGAGAT AAAATATCAGGCATGCTTCTACATATAACTCTGCCCTTTGTTAGTTAATTATATTTCATGCTTTGTTAGTTAATTAAATT TGAAGCTAAGTCTTGTTTGCATAGCCTTTTGTTGTTCCTTGGTTTATGGTTGCTCAAGGGTCTTCCGTCAGTGATATGCA CAGAGATTAGGCAGATTTATAAAATGTTCCAGCCAGTTTGGCTCATTGGTTTCTTTCTGTTTTAGTTGGGCGGGTTCCTA ACTTCCTATAATCCACTTGTGTATCTTTCATTTTTTTTTTCCTTCTGATATTGTATTAACCTCTTTCAATTAATTTCCTT ACTTTGCATTATTGTCTTTCCAGATTTTTGCCCTTAAACCAGCTGTTCACCAGGCTTTTTTCAATTTTGTTCCTAAGAAG GTATGTTGGACGTCATAAAAATGTTGGTCATTATCTTTGATAATTATTTGTGGAATAATCTTTCACTTTGCATGCTAAAG TTAATTTTGTTTTTTTATATGGTTTCCAAATTCAAGATGACTGAGGTTGATTTTTGGAACAAATACTTCAAAGCTGAATA TCTCCATAGTACCAAAAATATTATTGCTGCAGCTGCTGAGGCTGCTGAAGATGAGGATCTTGCTGTTTTTTTGAAAGATG ATGAGATATTAGAAATTGAAGCCCGAAAGAAGGTCTTTCTGTTGTTTCTCTTTTAATTTTATTGAAGATCTTTGGATTCC AATCTCAATTCCATTTATATTATGTGTATTTGCAGGTTCGACGGGTTGATCCAACTTTAGACATGGAAGCAGACCAAGGA GATGATTACACTCATCTTCCTGTATGGTGAATGAAACTACTCAATCTCATATAGGACATTCTTTTACAGCATGTTTGTTA TATATTATGCATTTTCACCCTTTATAAAGGAAAAATCTTAGTTTCAACTTATCATAATGCTTTGCATGTGCTAACATCTC TTATTACAGTTTTCTGACAGTTTTAGTATGAGGATAGTTGCATGTGCTAACATCTCTCATGTTGCTATAGTTTACGATCT AAAGAAAAGCAATTCCGTTTTAATTTTCGTAGCAGAATACACTTAATTTAGGAAGAATGTTCAGTATTTTATTGGCATTT GAAAAACCGGTATTACCCTTTTAGTCTCTTTTAGGATAAAGAATTTGAAGTAGGCATATTTCCTAGTTGTAGATTTTGTT TGCAAAGTTCTCAGTACGCACCAATGTTATATATGTATATATGATAGCCAATTTATTTGCATGTTTTCATTGAGTGACCC TGGGTGCAGTGTTAGTTTAAGCCATTAAATCTTACTGAGTAATAAGAACATAACTTGTATTCTTTGAATTGAAGAAGGGA GAATATTTCGAGAGGTAACCCTTTATGTGAATATCCATAAAGGTGGAATTTTTTGTTGCGTTAATGCCATTAGCTAGAGA GAGATTACAATTAGAAGGTCGGGTGGGTTTGTGTCCCTTAGCTAGTACCCCTTAATGTGAATCTTATTTATACTGATTAT TGAGAAGGGGTAGTATAGAGCCTGTATTTTAGTATAGTACAACTATGTACAATAAATGACTAATACATGAGATAGCTAAT GCTAACATCTGTATAATTTCAAGAATACTGAGAAGAAAATTCTTAATCCCTTCCACAACATTGTCCTCTAATGATTGGAT ATAACAAGATTTCAACTCACTCTAATCCATGAAAAATGATCTCAAATGGATATCCTTCTTTCACTTCTTTTCCTACCTCT TACAGCCTTACCTCTACATTGATTCTCATTATGGTGTGCTGTGAATGACTATTTGGATGGTTTTCTTTGTTGGATAGGAA GAGAGATTAGTGAGCTTTGCTAAGTGAATTCGCTTGTTTTGCCCTTGTACTTATTACATTTAATTAAGTGACTGTTATTT TTGGTTCCAATAGTTGTTTTGTCGTAGCGTATGATGATTTTTTTCTCCTTTCACGCTGCACATGGAATGAAACATGAATG AGTTTGCTATTGATCATTTAGTTGTTAGCAAGATGTCAAATGTTGCACAATTACCGTGCCTATCTATGCTGTTGGTTAAG TGCTAGATCTGCATTGAATTTCTGTTCCGTAAGTCTTAACATTGTTCTCTATTTGATGAGAAGGATCACGGGATCTTCCG CGATGGCAGCAAGGAAATACCTGAAGCTCAACATCCCTTGTATAGGAGAACATTGTTACAAGATCTTAACAGACAAGGTG CAGTAGTTCTCGAAGGAAAAACTTTAGGTAATTCTATCTCTTCAATTTTATGTTTTCTTACCAGAGACAGTTTTGTTTCA TAATTGCATTATTAATTTTTTTTCCTTCTCATTTTGGCTATGTTTTATTACTTACTGTAACAGAGTACATTCCTTATAGT TTTTGTCTTAAATTTATCTCTGTAGGCTGACAAAACAATATTTGATTGTACATCTGTAAATAGTGACATATATGCATATC ACAATTATGTTCTTATCTTATGGTTAATTTGCTTTACTCCTACAGTCATTTTGAAGTGAACTCTCTGGACGTGGTAAAAT GAGTAAAATGAGTTGTTGAGCAGTTCAAATGTATTAAAAAATGACGGTAGGAGTAAAGCAAATGGTTAATTTGTTTGAAT GTTCAAATTAACTTCAAATGTTCAAATGTTCTTATCTTATGGTAAAATGAGTTGTTGAGCTGGTTGATAAATTTAAACTG CATATATTTTTTATATAAAATCTATTTCTATTTTGTAATAAAATTTTTTTTTAGGTAATTATAGTGTTAGTTTTTTTAGA CAATTTTTCGTTTGAAGATAAAATGTTTTATCAAAATAATTTAAAAATAGTTTGTAACAAGTAAAATAAATAATGTTATA TAAAAAATAACCCAAAAATAGTGTAATAATTAAAATAAACATTTAGGATCTTTTTTATTTCATTTGTTTGGTAGGATCCT TTTGATTATATTTTATTATGTTAGCCCCAAAATAGACCTATTATCTAGCATCCCACAATAAATTAGCTATAAAGGAACTT TTTTATTGTAATAATGATGGCAAAAAATGAGATTAAAAAGCTACCTCAAGTAGCTTATGAAAAATGGTAGCTAGTGAAAT AAGCTTGGTACCCTAACACCTCTATTTTGTTTAAACAATCTTACAAACTAGTTGAATAAGCTATAAGCTAGTTGAAATAG CTAGTCACTCACTCTATGTCTGAATGATCTGGTCTGATGAGTCAGATTTCAAAATATAAAATGTAGATATGGAAACGGAA CAACCAAGAACAGTGGCAGAAGTTATTGCACGGAGACAACAGGGTTAGTGAGGTTAAGCTTGTTTTTTCCCTTTCCGTTC ATGTGGAGAAAGCTCTTATTTTATACCCCATCACAGAATCTGATGGAGTTAGAGAGGAGGAGAGACGAAACAGAATTTCT AAGATGACCCAGATTGAGGATCTGCAGGCACAAGATGATCATCCTTTTGCACCACTCTGTATTAAGGTTCAACTTTGTCT TGAGAATTAAATGACTAACAATTATTGTAGTACTTATATATTTCTATGTTGTATCTGAACTCTGAAGTCACAATTATTGC ATGAATTTCTATGTTATATCTGTAAATTGTTTATGACTCTATGTTTGTCTCCTGATCAGGATCCTCGTGACTACTTTGAT TCCCAGCAAGCTAATGCAGTAAAAACTTTGGATGATTCCCTAGCTGGAATGGAACAAACAAGATGTAGTTTGGGTTCTGA GGAAGCCTATGGCTCTTTGAGGGCATCCATATCTAAGATCAAAGCTAAAGGATTAAAGGATCCTCTACTTAGTCCTGAGG TTGCTCTTAAGGTACTGATATTTTTACCATATAGTTCTTTCATTTAAAATAAATGTCAAATATTTTGAGTAGATTGAAGA AGGTATATGGTAAAATGCTTGATTTGTTATGAAGACAACATATTTTCCTGTTTATTTCGTGTATTCACGTAAAACCTCTC CTTGAAAATTAAATTCGTTTACTTTTTTCCAGGTCCTTAATGGATTGACAAAAAATATTTCAAGCACCAAATCTCATCTT GGAAAAAATTCTCAGGAGAGTGTCCTTGATTTATTGCCCAGCACAACGAAGGAGAAGCTACTAGATGTGAGTCAAGCCAA TTGTTTGAGGTTTTTGAGAAGGAATATATGAAAAAAAAGGATGGAAAGAAAAGATAAAGAGAGCAGGGGATGATTCTATG AACTTCTACTGATATGTGTAGTGTGGCATATGTTGCTTTTATTATCAGGCAGTAGTTTAGCTTTTGATAAGCTTTATATA GTTTTTATGGGTAGTTCTGAATATTCTTATTTACATGCTTCCTTCTTTCCAGCATTGGGTGTGCAGTCAGGAATTGCTGA GGCACTTTTGGTCTTCCTATCCAATAACAGCACAAAACCTTATTAGTAAGGTAAGTATTGATCTTTTTTTTTTATTTCTA CAAGATATTTCAATGCTGATTACTGTGTATGACCTATCTAACATTTGCATCCCTAAAGTTTCATGTATCTGGGATGTTGA TTTGCTTGCAATTATTTTTTAAGCTTTTCATTTATCATGGATTTTCTTTTCATCACTCTTTCTTCTTCCAGTCCACCTCT CCTCTCTCTTCCCGTTTCTTTCTAAAGAGCAGTGCTTTTACGGCGTCATAATGTGATAATATGGTTGATATTGTAGGAAG TTTATATTTTCTTGCACCATAAGTGAAACTGTAAACTAGTTTTGTCAACAAATTTGTTGATTATATAAATTGCTATGCTA GAATCAGGATTTGTGGGCTTGATTTGACATGGAATAAGGTAATGATATAGGGTTTGTGATGGGAACCAATGTAACAATAA CAGGAAACTAATAGCAGAATGAAGAAAACAGGGTAATATTGATTGATGAAAGATGCAAATACAGTAGCAGAAGCTAAGAT TCAACTACAATCTGTATATCTTGTAAACTAATCAATGTTCAAACCCCAAATTATTTGATCAAATTCATCAAAGGGTCAAA GAGGTTTTGATATCTTGTCAAGGAACCACTCAACTGAGCAATTAAGCAGAAGCCTTAGACTGACATTTCAGAATCACAAC AGGAACTTGAGTAGCACCCATAATTACAATTCATTTGATACCTAAGAACTGTCTTCTTGGTCCGGTTTCCACAAACCTTC CTTTCTTTTCCCTTCTACCGAAATCATAAATAGCACCTAGGTGGTTAACCAGCTAGGCATTGGATATGTTGAAATGGTTT TTCCTACTATTTGTCAACTCATTGGTGACAATGCATCGTACATGCATTATATTGCAAATATGTTTGCAGTGATTTGTCTG AGGAATTTTTCTGAATTGAATTTTTATTATATCTGATGTTGCTTCACTTGGCAATTAAATGTAGACAGCGAGACTGAAAG AGGCTATATCACAAATTTACTCTAAACTTGAGGTGTGTATTTAGCCAAAGCCTGTACTAGTATTCCTCATTGGACTAATT GTCTTTGCTTTTATTCTATCATTACATGGATACCAGCTTCAGTTTTATTTTAGCAATTGCTAAAGTGTTTCTATTTTTAT TTGATGATTCCCAGGAAATAAAGGTATCTGCACAGTCAGACCTGCGGCATCAGGTTTCGCTTATTGTCCATCCTATGCAG CAGGTGAGCACACCATACTCAATTTTTACATGGTTCATTTTTGTGTCTCCTATTTTTGTAATTCCTGTTTGGATACATGT CAGAAAGTATGAAAACGGAAAAATAACATATCCTGGGTGAACAAAACGTTCCTCTTGGATGTGTTATTTTTCTGTTTTCA TATTTTCTGATTGGATATACCTATCATGTTTGTTGGATTTTACGGAGGATTAAAGATGCGCAAATATTATGGTGCAGGCT TTGGATGCTGCCTTGTTACATTATGATGCTGACATTAAGAAAAGAAATGCAAGAGGACAGAAGCCTAATGGTGTTTAGAG GAACATTTTGCCTCTGCGTACTTGCAGCATTTTACCTATTCATTTAGCAATGTATATTCCAACAGTTTTGCCCTGAACTA AAATTGTATGCCTATTGATCTCTATATCGTGATGAAATGAAATTATTAGAGTTGGTGAGAATCTTGTGAAATAGTTAACT TGCAACGTAGAATTACTTGTCTACACTTTACACGGTCCCTATGTGAAAAATTGAAGTACAGGAAAAATCTGAGAATTCAG AAGTTTCTAGCAATACGTTACTACTGCTAATCTTTGGCAGTGATACAGCAATAGATAATGACATGATTAATTCGATTGTT TGGTGCTTGTTCAAGACGAAAATGATTTCATTTTGTGCTTAGAATTAGTTTACAGCATTGTGCTTTTACAATGCGTATTT GTCATATTGGTAACTTTTAATTATCTTGTTTTCAAATGTAATTCGAGTAGAAGATGGCAGCTCTCTTACTAGC
CDS sequence (LotjaGi5g1v0258200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGTCTGGGCAAGTGGTTAAGCGTGCCAAATACAAAACCACCGTGAAAGGTCCTGGCACTCCTGGTATTCTCAAATT GACTCAAGATAAGTTTGTTTTCAAGCCTAATGATCCTACCTCAAACAACAAGCTCGACGTCGAGTTCAGATTTATAAAAG GTCATAGAGTTACGAAAGAGGGATCGAAACAACCGTTGCTTAACCTTACCCATGCCCAGGGAAGTTACATCTTTGAGTTA GAAAGCTTTCCAGATCTTCATGTTTGTCGGGAGTTGGTGGGTAATGCCCTTAGCAAGCATGTAGAAGCTCCAAAAGTTAC TACTGAGGAACAGCTTAGCACTGCTGAACTGACACTCAGGTTGAAACTATTGCAAGAAGATAGTAAGTTGCAGAAACTTT TTAAGGAACTCGTGGCTGGTGGTAAGCTTACCGAATCAGAATTTTGGGCTACAAAGAAGAAAATGCTGGATCAAGATGAA AGCAGAAAGTCAAAACAACGGATTGGTTTTAAAAATTCTTTGATCTTTGACACAAAGCCTACTAGTGATGGTCGGATAAA TCAGGTTAAATTTCAGTTGACACCAGAGATAAAATATCAGATTTTTGCCCTTAAACCAGCTGTTCACCAGGCTTTTTTCA ATTTTGTTCCTAAGAAGATGACTGAGGTTGATTTTTGGAACAAATACTTCAAAGCTGAATATCTCCATAGTACCAAAAAT ATTATTGCTGCAGCTGCTGAGGCTGCTGAAGATGAGGATCTTGCTGTTTTTTTGAAAGATGATGAGATATTAGAAATTGA AGCCCGAAAGAAGGTTCGACGGGTTGATCCAACTTTAGACATGGAAGCAGACCAAGGAGATGATTACACTCATCTTCCTG ATCACGGGATCTTCCGCGATGGCAGCAAGGAAATACCTGAAGCTCAACATCCCTTGTATAGGAGAACATTGTTACAAGAT CTTAACAGACAAGGTGCAGTAGTTCTCGAAGGAAAAACTTTAGATATGGAAACGGAACAACCAAGAACAGTGGCAGAAGT TATTGCACGGAGACAACAGGAATCTGATGGAGTTAGAGAGGAGGAGAGACGAAACAGAATTTCTAAGATGACCCAGATTG AGGATCTGCAGGCACAAGATGATCATCCTTTTGCACCACTCTGTATTAAGGATCCTCGTGACTACTTTGATTCCCAGCAA GCTAATGCAGTAAAAACTTTGGATGATTCCCTAGCTGGAATGGAACAAACAAGATGTAGTTTGGGTTCTGAGGAAGCCTA TGGCTCTTTGAGGGCATCCATATCTAAGATCAAAGCTAAAGGATTAAAGGATCCTCTACTTAGTCCTGAGGTTGCTCTTA AGGTCCTTAATGGATTGACAAAAAATATTTCAAGCACCAAATCTCATCTTGGAAAAAATTCTCAGGAGAGTGTCCTTGAT TTATTGCCCAGCACAACGAAGGAGAAGCTACTAGATCATTGGGTGTGCAGTCAGGAATTGCTGAGGCACTTTTGGTCTTC CTATCCAATAACAGCACAAAACCTTATTAGTAAGACAGCGAGACTGAAAGAGGCTATATCACAAATTTACTCTAAACTTG AGGAAATAAAGGTATCTGCACAGTCAGACCTGCGGCATCAGGTTTCGCTTATTGTCCATCCTATGCAGCAGGCTTTGGAT GCTGCCTTGTTACATTATGATGCTGACATTAAGAAAAGAAATGCAAGAGGACAGAAGCCTAATGGTGTTTAG
Protein sequence (LotjaGi5g1v0258200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSGQVVKRAKYKTTVKGPGTPGILKLTQDKFVFKPNDPTSNNKLDVEFRFIKGHRVTKEGSKQPLLNLTHAQGSYIFEL ESFPDLHVCRELVGNALSKHVEAPKVTTEEQLSTAELTLRLKLLQEDSKLQKLFKELVAGGKLTESEFWATKKKMLDQDE SRKSKQRIGFKNSLIFDTKPTSDGRINQVKFQLTPEIKYQIFALKPAVHQAFFNFVPKKMTEVDFWNKYFKAEYLHSTKN IIAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGIFRDGSKEIPEAQHPLYRRTLLQD LNRQGAVVLEGKTLDMETEQPRTVAEVIARRQQESDGVREEERRNRISKMTQIEDLQAQDDHPFAPLCIKDPRDYFDSQQ ANAVKTLDDSLAGMEQTRCSLGSEEAYGSLRASISKIKAKGLKDPLLSPEVALKVLNGLTKNISSTKSHLGKNSQESVLD LLPSTTKEKLLDHWVCSQELLRHFWSSYPITAQNLISKTARLKEAISQIYSKLEEIKVSAQSDLRHQVSLIVHPMQQALD AALLHYDADIKKRNARGQKPNGV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 575 | 571 | 1.9E-204 | ||
| SUPERFAMILY | 7 | 103 | 97 | 3.32E-6 | – | |
| Pfam | 21 | 82 | 62 | 3.5E-6 | ||
| ProSiteProfiles | 102 | 160 | 59 | 9.425 | ||
| SMART | 102 | 160 | 59 | 0.089 | ||
| SUPERFAMILY | 110 | 156 | 47 | 1.11E-11 | – | |
| SUPERFAMILY | 185 | 237 | 53 | 1.96E-7 | – | |
| ProSiteProfiles | 185 | 237 | 53 | 11.703 | ||
| SMART | 185 | 237 | 53 | 4.0E-6 | ||
| Pfam | 187 | 239 | 53 | 1.4E-10 | ||
| Coils | 359 | 379 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Transcription factor TFIIH core complex | The 7 subunit core of TFIIH that is a part of either the general transcription factor holo-TFIIH or the nucleotide-excision repair factor 3 complex. In S. cerevisiae/humans the complex is composed of: Ssl2/XPB, Tfb1/p62, Tfb2/p52, Ssl1/p44, Tfb4/p34, Tfb5/p8 and Rad3/XPD. | ||
| Biological process | Nucleotide-excision repair | A DNA repair process in which a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts). | ||
| Biological process | Transcription, DNA-templated | The cellular synthesis of RNA on a template of DNA. |
Expression pattern of LotjaGi5g1v0258200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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