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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0260200 |
| Transcript ID | LotjaGi5g1v0260200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT2G48010.1 receptor-like kinase in in flowers 3; Swiss-Prot: sp|P93050|RKF3_ARATH Probable LRR receptor-like serine/threonine-protein kinase RKF3; TrEMBL-Plants: tr|A0A072VYY2|A0A072VYY2_MEDTR Receptor-like kinase in in flowers protein; Found in the gene: LotjaGi5g1v0260200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:56864328..56867330) extracted from Lotus japonicus Gifu genome v1.2.
GGAGAAAGTTAGCTACGGAACTCCAACTAACAAATAAATGGATACTTCCAAGTTACAAAATCCTTGAGCCATCAATCATA CATTCTTCAAGAAATCTATCTTCTCCTATGAAAATTCAGCCCAAGAAATCTCACCCTCATCCTCCCCCATTTTCCACTAC ATTTCTACTATCACCTTCTAGATGAAATGAAAGTAGATTTGAAAAAGAAGGTAACAAAAAGAAACCTCAAAAGCAAGCAA GCAAAGCATACCTACTACTACTAAAAGACCATGAGCATCCATGAACAATGATCCATGACTATGTTGAGTCAAACCAACAC AATGTACTTACTACTTCCCTTTTACAGTAACAGTAAACCAGGTTGAGTTCCTGGAAGCACCCTCCTAGTACTGTGTTGTG GATTGATTAGACAGAAAGAAAGAGAGAGAGAGAGAGTAAGAAAAAAGAACATGATCTCTTGTCTTGTCACCAGCAACTAC CTCAATCCACCAATCCCATGGTCAAAAGTTAACTCCAAAATCTTTCACCCTTTTCTTTCATCTTCATCTTCAACCTCACA AATCTCAAACCCACCAACCAATCTTCATTCTCTTCTCAATTCTCACCACCATACTCAATGAACACCATCATAATCATAGT CATCAACCTCTTCACCATCATCTCCTCTGTTTCTGCTGCCACATGTCCCCTGAACTTCACTGTCCTCACCGCCATCAGCG GCGGCGCCAGACCCCAATACTTCGACTCCTCCGGCGGCGCAACCCGCTGCCAGTTCATCCACCAAGCTCTCCGCCTCGTC CAGTCAGACTACCTCCGCCGCACCTCCTCCTTCGTCCCTCCCCTGAACTCCTCTGAATCATGCTGGAGCTCGTTTCAATC CTACACCAACACCTTCGACCGCAACTTCGACATTCGCTCCTCCTGCGGCTACCAAACCTCTTGGATCTCTCAGGGTTGCG TCAATGTCACCACCAAGGAGCAATTCGAAACCCTAGTCCCTCAATCTTCGCTTCAAAACATGGCAGAAAAGTGCAACCAG ACACTGGAAAACAACGCACCCTGCGCACTCTGCACCACCACTTTGTCGAAGTTACCATCTCTAGGCCAATCCATCGGGAA CCTCTCCGATTGCACCGGTTATCCTTCCATCTACGCCGCCGCTTTTTCCAACCAGTTTGGACCCTCTGACCCCGGCACTG CCAAGTGCTTGTTTCAGCTCGATTTCACTTCTGGGGGTTCTTCTTCTGGGAAGAAAAGAGTCATTGTTATTGTTGTTGTT TCTGTTGTCTCTGTTTTGGTTTTGTCCCTTTTGGGTGTTGGGTTCTGGGCTTGGTTGAAATTCAATGATAAGGTGAATGA AGATAAGGATGTTAATCTTTCCGAGACCGGTTTGGTTTCGAGGTTGGAGTCTATGGATCAGAGTACTACTCTGATCAGGT TCTCAATTGATGATGTTAAGAAAGCTACTAAGAATTTCCATAGAGATAATATAATTGGGAGAGGGGGTTATGGGAATGTG TATAAAGGGTTGCTTCCTGATGGCTCCGAAGTTGCGTTGAAGCGGTTTAAGAATTGTTCTGCTGCTGGTGATGCTAGCTT CACTCATGAGGTTGAGGTTATAGCCAGCATTAGGCATGTGAACCTTGTTGCTTTGAGAGGCTATTGTTCCGCCACCACTC GTATGGAAGGTTACCAGAGGATTATTGTTTGTGATTTGATGAAAAATGGGAGCCTTCATGATTACTTGTTTGGTTCAATG GGGGTGAAACTAAGCTGGCCAACGCGACAGAGGATCGCGCTTGGCACAGCTAGGGGATTGGCTTATTTGCACTATGGGGC TCAGCCTGCAATCATCCATAGGGATATTAAAGCAAGTAACATTCTTCTGGATGAGAAGTTTGAAGCTAAAGTTGCTGACT TTGGACTAGCAAAGTTCAACCCTGAGGGTATGACTCATATGAGCACAAGGGTTGCTGGGACTATGGGGTATGTTGCTCCT GAGTATGCTTTGTATGGACAATTAACAGAGAGAAGTGATGTGTTTAGTTTTGGTGTTGTGCTTCTTGAGCTTTTGAGTGG AAAAAAGGCTCTTCAAATGAGTGATGATGGCCAGCCTTCTGCTTTGACTGATTGGGCTTGGTCATTGGTTAGAACAGGTA AACATCTGGATGTTATTGAGGATGGCATGCCAGAATGTGGTTCACCTGAACTTCTTGAGAAGTATGTTTTGATTGCTGTG CTTTGTTCTCATCCTCAGCTGTATGCTAGGCCAACAATGGATCAAGTTGTGAAAATGATGGAGACTGATGAATCAGTGCC CTCGATTCCACAACGGCCAATCCCTCTTGTAGCTGGGAGGCTTGATATAGAGAGATCTGTGAGCAGTAGCGGCTCTCTCT CGAGTCCCACCGGTTATCAGTCATATACTTTAGGAGATGGACTCCATTCTTCTAATTCTAGGGAAGAAAGAAACTCAAGC TCCAGAATTTTGAGTACAGATGAGAGTTGAGGTTTGCATTGTATTGTCTTCCACTGGCTAGTGTCAGTATAAGTTGTTTA TACATTTAGTTTAGTTTAGATTATAGATTGTTATGTTTCTTGAAGCATCTTACAAAGCCATATAAATGTAAAATTTTTGA TATTTATTTATTTTTGGTGTTTACTTAGAGGAAGGAGAGTATGATCAAGTTTTGCTGAATTCAGATTCAAATATTTATAT TAGATCCCATCTTTCAATTTGTTTTAAGAGTCTTCTAATGCAAGAAGTGATGACTGATGGATTCTCACTTTAAGGAATCT TGCATCCAGTTTTAGCTTTAAGACTGTCCTTGTGCTGCAGCTTATTTCACTATTTGTTGAAGTAGAGAAACTCTCTTGGT ATGGCTGTTGCTTTTGATGCCAATTGCAGTTTGGTACTGTCAAGTTATATTATGTTTAGATCAACTGCTCTTTTATTAGA ATCAATTATGGCACTCGGAAGCTTCTCGTAAAAGGTTCTTCCC
CDS sequence (LotjaGi5g1v0260200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACACCATCATAATCATAGTCATCAACCTCTTCACCATCATCTCCTCTGTTTCTGCTGCCACATGTCCCCTGAACTT CACTGTCCTCACCGCCATCAGCGGCGGCGCCAGACCCCAATACTTCGACTCCTCCGGCGGCGCAACCCGCTGCCAGTTCA TCCACCAAGCTCTCCGCCTCGTCCAGTCAGACTACCTCCGCCGCACCTCCTCCTTCGTCCCTCCCCTGAACTCCTCTGAA TCATGCTGGAGCTCGTTTCAATCCTACACCAACACCTTCGACCGCAACTTCGACATTCGCTCCTCCTGCGGCTACCAAAC CTCTTGGATCTCTCAGGGTTGCGTCAATGTCACCACCAAGGAGCAATTCGAAACCCTAGTCCCTCAATCTTCGCTTCAAA ACATGGCAGAAAAGTGCAACCAGACACTGGAAAACAACGCACCCTGCGCACTCTGCACCACCACTTTGTCGAAGTTACCA TCTCTAGGCCAATCCATCGGGAACCTCTCCGATTGCACCGGTTATCCTTCCATCTACGCCGCCGCTTTTTCCAACCAGTT TGGACCCTCTGACCCCGGCACTGCCAAGTGCTTGTTTCAGCTCGATTTCACTTCTGGGGGTTCTTCTTCTGGGAAGAAAA GAGTCATTGTTATTGTTGTTGTTTCTGTTGTCTCTGTTTTGGTTTTGTCCCTTTTGGGTGTTGGGTTCTGGGCTTGGTTG AAATTCAATGATAAGGTGAATGAAGATAAGGATGTTAATCTTTCCGAGACCGGTTTGGTTTCGAGGTTGGAGTCTATGGA TCAGAGTACTACTCTGATCAGGTTCTCAATTGATGATGTTAAGAAAGCTACTAAGAATTTCCATAGAGATAATATAATTG GGAGAGGGGGTTATGGGAATGTGTATAAAGGGTTGCTTCCTGATGGCTCCGAAGTTGCGTTGAAGCGGTTTAAGAATTGT TCTGCTGCTGGTGATGCTAGCTTCACTCATGAGGTTGAGGTTATAGCCAGCATTAGGCATGTGAACCTTGTTGCTTTGAG AGGCTATTGTTCCGCCACCACTCGTATGGAAGGTTACCAGAGGATTATTGTTTGTGATTTGATGAAAAATGGGAGCCTTC ATGATTACTTGTTTGGTTCAATGGGGGTGAAACTAAGCTGGCCAACGCGACAGAGGATCGCGCTTGGCACAGCTAGGGGA TTGGCTTATTTGCACTATGGGGCTCAGCCTGCAATCATCCATAGGGATATTAAAGCAAGTAACATTCTTCTGGATGAGAA GTTTGAAGCTAAAGTTGCTGACTTTGGACTAGCAAAGTTCAACCCTGAGGGTATGACTCATATGAGCACAAGGGTTGCTG GGACTATGGGGTATGTTGCTCCTGAGTATGCTTTGTATGGACAATTAACAGAGAGAAGTGATGTGTTTAGTTTTGGTGTT GTGCTTCTTGAGCTTTTGAGTGGAAAAAAGGCTCTTCAAATGAGTGATGATGGCCAGCCTTCTGCTTTGACTGATTGGGC TTGGTCATTGGTTAGAACAGGTAAACATCTGGATGTTATTGAGGATGGCATGCCAGAATGTGGTTCACCTGAACTTCTTG AGAAGTATGTTTTGATTGCTGTGCTTTGTTCTCATCCTCAGCTGTATGCTAGGCCAACAATGGATCAAGTTGTGAAAATG ATGGAGACTGATGAATCAGTGCCCTCGATTCCACAACGGCCAATCCCTCTTGTAGCTGGGAGGCTTGATATAGAGAGATC TGTGAGCAGTAGCGGCTCTCTCTCGAGTCCCACCGGTTATCAGTCATATACTTTAGGAGATGGACTCCATTCTTCTAATT CTAGGGAAGAAAGAAACTCAAGCTCCAGAATTTTGAGTACAGATGAGAGTTGA
Protein sequence (LotjaGi5g1v0260200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNTIIIIVINLFTIISSVSAATCPLNFTVLTAISGGARPQYFDSSGGATRCQFIHQALRLVQSDYLRRTSSFVPPLNSSE SCWSSFQSYTNTFDRNFDIRSSCGYQTSWISQGCVNVTTKEQFETLVPQSSLQNMAEKCNQTLENNAPCALCTTTLSKLP SLGQSIGNLSDCTGYPSIYAAAFSNQFGPSDPGTAKCLFQLDFTSGGSSSGKKRVIVIVVVSVVSVLVLSLLGVGFWAWL KFNDKVNEDKDVNLSETGLVSRLESMDQSTTLIRFSIDDVKKATKNFHRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNC SAAGDASFTHEVEVIASIRHVNLVALRGYCSATTRMEGYQRIIVCDLMKNGSLHDYLFGSMGVKLSWPTRQRIALGTARG LAYLHYGAQPAIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGV VLLELLSGKKALQMSDDGQPSALTDWAWSLVRTGKHLDVIEDGMPECGSPELLEKYVLIAVLCSHPQLYARPTMDQVVKM METDESVPSIPQRPIPLVAGRLDIERSVSSSGSLSSPTGYQSYTLGDGLHSSNSREERNSSSRILSTDES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 20 | 20 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| Phobius | 16 | 20 | 5 | - | – | |
| Phobius | 21 | 214 | 194 | - | – | |
| PANTHER | 210 | 582 | 373 | 1.2E-171 | – | |
| PANTHER | 210 | 582 | 373 | 1.2E-171 | – | |
| TMHMM | 215 | 237 | 23 | - | – | |
| Phobius | 215 | 240 | 26 | - | – | |
| Phobius | 241 | 630 | 390 | - | – | |
| Gene3D | 251 | 365 | 115 | 4.4E-29 | – | |
| SUPERFAMILY | 269 | 577 | 309 | 1.62E-75 | ||
| SMART | 287 | 561 | 275 | 1.7E-30 | ||
| ProSiteProfiles | 287 | 567 | 281 | 34.605 | ||
| Pfam | 287 | 499 | 213 | 1.3E-41 | ||
| ProSitePatterns | 293 | 315 | 23 | - | ||
| Gene3D | 368 | 569 | 202 | 1.3E-58 | – | |
| ProSitePatterns | 412 | 424 | 13 | - | ||
| MobiDBLite | 588 | 630 | 43 | - | – | |
| MobiDBLite | 588 | 610 | 23 | - | – | |
| MobiDBLite | 611 | 630 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0260200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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