Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0260400 |
| Transcript ID | LotjaGi5g1v0260400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histidine phosphotransfer protein; TAIR: AT1G03430.1 histidine-containing phosphotransfer factor 5; Swiss-Prot: sp|Q8L9T7|AHP5_ARATH Histidine-containing phosphotransfer protein 5; TrEMBL-Plants: tr|I3SUF5|I3SUF5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0260400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:56889896..56894387) extracted from Lotus japonicus Gifu genome v1.2.
GAAGCAGTAAATTGACAAATTACGAAGGAATCCCCATTTTTGGTAAAAACAAAAAAAAACAAAAAAACACTCTCCCGACA AAACAACGTTTTCTTGTCTGGATTCAGACACACACGCTCGCACCCACCCACCCCGCCACCACTTTAGAGAGAGAGAGAGA GAGAGAACACCACCACCACCACCTCTGTCAAATTCAGTGTCCAACAATTTTCAGATTCAACTTTCTGTGTTTGCGATCTG GTACTGGACCAAGCCATGGATCATGTGATTCAGCTGCAGAGGAAGCTGCGTGAACACGAAACTGCCATGTTTCGCGAGGT TCATCTCTTCAATTTCTTTCTTCCTAGTATTTTATTCCTACTTCTTCTTCTTCTTCTTCTTCTTCCCTCTGGTCAACGGG ACTTTGACTTTGCTGTTGGTTGGTCGTTTTCCATGATGATTGTTTTTTAGTTTTTTCAATTTGTGATATTTGATTGGTGA TTTTTTTGGGTGATGGGTTCTTAGGGGTTTCTGGATGATCAGTTCAGCCAGCTTCAGAAACTGCAAGATGAGACCAGTCC AGATTTTGTGATTGAGGTTGTCACCATGTTCTTTGATGATTCTGAGAATCTCCTCAACAGCATGGCACGTGCTCTGTATG TATTATCATTATGATATATTCTTTCATTGATTTATTAACTTTCTGAATTCTGATATATCACTTTTTGTATGAGATATTGA GAATTAATTGGGAAGGGAATTTATTGTTCCAATGGGTTTTCTTTGATTTGTGCAGAGAACAAGTACCTGTGGATTTCAAA CAAATAGATGCTCATGTGCATCAGTACAAAGGAAGCAGTGCTAGGTATAATAATATTAATACTTTATTTGATTGATTGTC TTTGTGTACTGATTGCTGCTGTGACCTGCAAAAAATATATTCCTAGAAGAAGTTCTGATTATTTGTGAAATTATATTGTT TAACAGTGTTGGTGCTGCCAGAGTTAAAAATCTCTGTGTTCCTTTCAGAAATTTTTGTGAGACTCAGAACTTGGAAGGGT GAGTGCTCTAACATATTCTCCACTTTATGCTATTGCTTCAACATTAGTAGTATCTAATATCATGTGAATGAAATATTTTT GTTCTATATTGCTTGGCTTTAATGCATTCATTGATTCTTACTCTTAAGTTTGTTGGGTGGTATGGTCAATAGAGCCTTCA CATGTAATTTCTGAAGCTTTAACAACCTTTGAGGGATCTATTTCAGGGGAAACATTTAAATACTTCAGGAACAAAATACA TCATAAATTAGTATGATTATGTCATTTTCAAGTTCCTCTAGAGTTTAAATGACAGAAATCTTTGGTATGTGCTGCAAGTG GGGGTACCTATTTATTCCTTATCTAAAAATCACTTCTTCTACGCATTTTGACCTGGAGACCTTCACTCTGTTACTCAGAT GCTACTGATTTTAGCTTTAATTTGGGGGAAGCAATTCTAACAGTAAGTTTTATTTTACTTTTAAAAATCTGCATCCCCTA AATAGTTTTTGTTTCACTAATTATGGTATCAATTTTGTAGTACACTTCTAAAGAATAAACTGGAAAATCTAAATTCTGTG TTTTTAAAAACTGGCAATAAAATTAGTACCTATAGTTTGAAAGTCTTAGTCTCCTAATTTCTTGAGTCTTTCTTCTTTCA AATAAAATACTCTTAACATTCTTGAATTTTGTATTTATCACATGACATCTACTTTTAAATTGTATGGAAAGCTTTTGCAC AAATTAAAGTGCGTTTACATAGATTTTTCAGGACTTTATCTTAACAGTTTCGTGGTGATTGTATAAATTTGTACTATTTA ATAAGAAGATATACAAAGGAGAAAAACATAAGACTATATTTGAGAACAAAATGAAAGTGATAAAAGAAAGATGATTAAGA AATTTAAGTCTATAAATACTAGGAAAAATAGTCTGTTTATATGATTCTTAAAAGGGAAATGATAATTTATTCAAAATTTT AAGTCATACCTTTTGTTATAGATATTATTCTTGATATGGACTGACTATAAAATTCAGATGTGGATTCTTCTTTTTCTTTT TTAAAAATGATAGTGTTACTTTTGAAGATAGAAAGACAAAATGATAGTGTTTCTTCATCATCTCTTTTTATCCTCTTCTT CAATGGAGATCCATATTTTTCCAAACAAGATAATGCGAGTTTTTGGAATGAAATTCTATTTCACTCTTCCTTTTTCTTTT TAGGAATATACTATCAACTAATATACTAAATTACTTTCCCCACTTAGGGCCTGTTTGATAACTGTTTCCAAAACAGTTTT CAGTTTTTAAAAACTGAAAACTTGTTTGGTAAGACCTGTTTTCAAAAACAGTTTTTGAAAACAGTTCTCATTTTTAGTTT TTAAAACTAAAAAACCAAAACAGGTAAAAGATGTTTTCAGTTTCAGTTTTTAGTTTTCAGATATCAGTTTTCTAAATGTT CGAAAACATGTCATTCAAACTGTTTTCTTCTTCTGAAAACTGTTTTTAAGAATTGTTTCTGAAAACTGTTTTAAAAACTG AAAACTAAAACTGCTATCAAACAGGCCCTTAGTCTGTCATATCTTGTTCAGATTTATTGGAGACAAGAAGAGGGAACCAA CTACCAAGTGATTTGAGTCCGTCATATAGTTTTTTTTTACAATGGTTTGCTCCTAGTCGGCTTCTTCAACTGTCCTTTCC ATTGAAAGTGAAATCAGCTTGACCTGATGTCTCTGAGAATAAAACAAACAAATTCTTAGAGCCCTCAAGGAGAAATCCTG TATTTTTACGTTACAACCAGCATTACTCTTTTGGAACAAGGAAGATTGCGGTTTGATAATAATAGAAATTTAAAACCAGC AATTGCAATAATAAGAGTTCTGAAAGACTGGGAATATGAAATAAATGTGATGACAATTGATGAGAGCTGAGAATATTTTC ATCTATGTTCTTATTTATACTTGAGATGCTTGAAGGCTTCATAGTCTGTAAAACCTGTTTATGCACCCCTGTAATTCAAC TGTATTAGATATTTAGTGCAGCTGCTGTCACAGATCATAGACCTTCGCATATGTTTTTGGATGAATGAGTAGTATTGGTT ACATTACATGCTATGTAATTCCAGTTAATTTTTTGATTTCTTGGATCAAAACTTCTGTTCTGAGATCAAATTGATTCTTA AAGTGAAAGTGAACTGTTTATACATGTGCTTATATTTTAAGAGATCTTCCATTTACAATTCACTTTATTGAACTACATTA GTAAATACATTAAAAAGGTTGGCTGCTGGTGGGTAACAAAATATCCCCTTTCCATTGGGACTAAAATGATAATGAAGAGA AAAATGTTTATTGAATGCTTCTTTCTTAGCAGTTAACAAAAAATAAAGCATGGTGTTGTATGGCCTTGACTCTAATAGCA TGTTTGGATCAACTTCTTTCTTCATAATCAATTCTGACATGCAGAAGCTACTTGCATAAACTTGTCCTTAGAATTGATTT TGTCTTTAGAATCAATTGTAGAAGGTTTTCCAAACATTAATTAAATTTTGTACAAATCACTAAGGAAAAAGATGTTGGTG CAGGTGTGTGAGATGTCTACAACAACTGCAACATGAATACAGTCTACTGAAGAACAATTTTCAATATTTGTTTAGGGTAA GTACTGTAACATTTTGTTCTAGGAGCTTTTTCTCACTTAATTTCCCACACTAATGCAGCTTCATATGCCTGTTTGAATCC AAATGTAAAGCGCTAAAGTATATTACTTGCATTTTTAAATACAGCTGCAGCAAGAAATCAAGGCTGCTGGTGGTTCTTTT CCGACAATAGAATAGATGGAGGTGACATGATTGCTTACTAGGGAAAATGAGGATTGAATTAAATGATGCTTTTTCCTTTA GCAGCTGATTTTGTTTTTCTGGATTATACCTCATGAATGATATCAAGTTTCATTTGATCGCTGGGATAGTGCTGTTGTGA ATAAGCATTTCTAGCCTAGTTTGTTACATGTATGATATGATTCTTTTCCAATAAACTGTTGAGTACTTATCTAAAGTTTC ATATTTTTATACTCAAAATAAAGTGATAAAGTTTATATTGACAGGTCTGTCAATCCTTTATTTTTTTAATTGCAAAGAAA ATGTGTTTTTTTACAGTAGACTGACAAATGTATGCTATGTTTGGACGTTTGTCGACCCCTGATTAAACGGATGTTAACAC GCACCTCAATACAAAGTAAACATAGCTCTTCTAATGGATTGGGATGATGTCCATTTACAAAGTAAACCGAGCTCTTCTAA TGGATTGGGATGATTGTCATTTACATTGCATTCAACTAGTATTTAAACACACTAGTTAACTTTTCCGTTAGTTATGTAAA ATCACAAATTAACTTGTTAACTTACATGACTAAAGTTTCCTCCAAAACTTAATCTTAATACATGAACAACTATACATTTA ATGATACACTTA
CDS sequence (LotjaGi5g1v0260400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCATGTGATTCAGCTGCAGAGGAAGCTGCGTGAACACGAAACTGCCATGTTTCGCGAGGGGTTTCTGGATGATCA GTTCAGCCAGCTTCAGAAACTGCAAGATGAGACCAGTCCAGATTTTGTGATTGAGGTTGTCACCATGTTCTTTGATGATT CTGAGAATCTCCTCAACAGCATGGCACGTGCTCTAGAACAAGTACCTGTGGATTTCAAACAAATAGATGCTCATGTGCAT CAGTACAAAGGAAGCAGTGCTAGTGTTGGTGCTGCCAGAGTTAAAAATCTCTGTGTTCCTTTCAGAAATTTTTGTGAGAC TCAGAACTTGGAAGGGTGTGTGAGATGTCTACAACAACTGCAACATGAATACAGTCTACTGAAGAACAATTTTCAATATT TGTTTAGGCTGCAGCAAGAAATCAAGGCTGCTGGTGGTTCTTTTCCGACAATAGAATAG
Protein sequence (LotjaGi5g1v0260400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDHVIQLQRKLREHETAMFREGFLDDQFSQLQKLQDETSPDFVIEVVTMFFDDSENLLNSMARALEQVPVDFKQIDAHVH QYKGSSASVGAARVKNLCVPFRNFCETQNLEGCVRCLQQLQHEYSLLKNNFQYLFRLQQEIKAAGGSFPTIE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 150 | 150 | 4.7E-76 | – | |
| PANTHER | 1 | 150 | 150 | 4.7E-76 | – | |
| Gene3D | 1 | 152 | 152 | 1.5E-53 | ||
| SUPERFAMILY | 4 | 140 | 137 | 2.09E-35 | ||
| ProSiteProfiles | 39 | 144 | 106 | 13.826 | ||
| Pfam | 45 | 129 | 85 | 1.2E-12 | ||
| CDD | 45 | 144 | 100 | 5.02347E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. |
Expression pattern of LotjaGi5g1v0260400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…