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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0261000 |
| Transcript ID | LotjaGi5g1v0261000.7 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase; TAIR: AT4G03080.1 BRI1 suppressor 1 (BSU1)-like 1; Swiss-Prot: sp|Q60EX6|BSL1_ORYSJ Serine/threonine-protein phosphatase BSL1 homolog; TrEMBL-Plants: tr|A0A0S3SS72|A0A0S3SS72_PHAAN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi5g1v0261000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:56976823..56980263) extracted from Lotus japonicus Gifu genome v1.2.
CAGATCGAATATCCTGAGAATGTTCATTTGATACGTGGAAACCATGAAGCTGCTGACATAAATGCACTATTTGGTTTTCG CATAGAGTGCATTGAGAGAATGGTAGAGACAGAAACATACTTGTATTGATTCAGTATTTAGGTTCGAATCTGCAACTAAT TGTGCGCTTGTAGGGAGAAAATGATGGAATATGGGCATGGACGCGATTCAATCAACTTTTTAACTTTCTTCCACTAGCTG CTCTTATTGAAAAGAAAATTATCTGTATGCATGGTGGGATTGGAAGATCTATCAATTCGGTAGAACAGATAGAGAAGCTT GAGAGGCCCATAACAATGGATGCAGGATCCATCATTTTAATGGACCTTTTGTGGTATCTCTCTCTCTCTCTATCTCTCTC TCATGTGGCTTTGCGTTATGTTTGCATTTTCCCCCCTTATAACATCTATATATTTGTAGGTCTGATCCCACAGAAAATGA TAGTGTAGAGGGTTTGAGACCAAATGCTAGAGGGCCAGGGCTTGTCACTTTTGGGGTAAGTATAATACCATTCATTGCAA ACATGGGGGACCTTTCATGCTATGAGTAAATCTTTCAGTCCCACCTCCCATAAATTATGATGCATAGAAATGTATTCTCA TGTTTAGATCTGAGATTATAGACTACTGTGTGAAAGGTGTGGTCTTAGTCTATTATTTTATTTTATTATTATGTTATTGA AAAAATCTCAAGAAAATATATGGACATATATATTTCTCCGTGGGAAATATGAATTTCAATTTCCACAATTTCCGAAAGTC TGAGCACTAGTTGAGAAGGGTACACTGCTTGCTGTTTTGTTCTCCTCTTTGGAAAATCATTATAATATTACTTTCAAAAT ATAAAAATAGTCACTTCTTTTGTTTTAAGTTTGATTCACTGATGAATAGGATTAGGTGTCTACCATTACTATAAATGCAA CGTCTATCATTTTGCTGCATTTTATTCTTGTACTTCCTTTTTTTCTCATACTATACCCTAAAGACTTAAACCCTATAATT TCGTCATGGTATCAAACCAATACCATCCTTTGTGATCCATCCTATCAATATTTCACTGCCAAGTTTTCCAAAGTTTGAAA CTCTGTTCTAACAATGTCATTCTCTCCCCAACAAACAATCCAGACAATCTTTGTTGTGTCGATTTTTTTGAGGTACTCTG GTTTTGTTCATATCCTTGTTGTCTGGTTGCAATAGCTATCAGCGCTGACCCACCTTACATCGTCTCTGCAAGTTTCGATA TCTCTTTTCAATTTTCATTATTTAGTTTTAGGGCTTCAGTCACTGTTTACAACAACCCACCCACTCTATGCAGTCGTCAA ACGTCAAGATTGACACCCTCGTTCATCTCAGAAGCCATCGATCGACCAATCAGTCCCCCTAGCACTGCCACAAAATTCTC CACCATGTGTAACCGTATCAACCAGTACAAGTTTTCACCAGCACGTGAGGTACATGCGGCGCCTTACTAGCCTCTACAAA ATCCTCCACCATTGACGTTGCCGCTACTTTTGTGGTGGTTGTCCGCTTCTCCTGGTTCTGTTTTACCCCGGTTTGGCTTT TAGATTTGTTGGTCATGGTATCTCATTTGATGGTCACTATTTGCTGAGATAGACAGTCACCGGTGACTTCTATTCTCGTT TGGCCCTTTATTTGGTCTTGTGGTTGCTTATTTCACTCCCTTGTTTATCCCTAACTGGAGAGTACTTTTAGAGTTTCTTT GTCTATTCTGTTCTATGAATTTGTTTTGCTGCTTTTGCACCATGGTGCTCTATTTTCTCTGTTCCGATGTCTTTTTTGGT TGCTACTGGTTTATTGTTCTTATAGCCCAGATTTGTTTCTGGGTGAATTGATGCCGGTTTTCCGCTCTAGTTCACTCTCT ACTTTTGTTGCCTGAATCAGTTGGCCCTGCGTTAATCTTAGAGAATCAGTTTGGCTTGCAACAGTCCTAGATAATCAGCT AGGCCCTCATTATTTTTCTATTTCTAAAGGATACATTTTTATTAAGCTTAAACCTAAGTAAGCTTGAGCTTTAGGGGCAG TGTTATGTGTTATAATAGTTTGATCATATCTTAAGTAATTGAGGGCAGTTTAGATTATTCTTTAGTTTTGATTTCTTTAT TTCCTTATTCTATTGATTTAATTCCTTATTAAATTAAGATTAGGATTCTTAATTAGTTTCCCTATTTGAATAAGACTAGG ACTCTACCATTAGTATAAAAAAGACTACGTATTTTTTTGTAAGATACCCAATATATTATATCAATACAATTTTATTTTGT GTATTCTTTTTCCTCTTTCTATACCTTGACTAAACTCTGATTTCATCATATATCCTAGAGGTGCTAATTTGACTATTTAC TCTGATTTAAATTAAGATCATTCATGAGAACCTACATAAAGAAATGAATAGAAAAATCAACAGACAGACTTTGGAGATCT CTACAAATTGAAATTACAATTAAGGCAAACTTAACACGCAATAAAATATCAATAATTATTTCTTAACACAATTCAAAGCT CGTACTTTTTTTTTCACTCTCTTAAGACATTTTATAAATATAATATTTTTCCACAACTAGGCATGCCTTGAAGTTCTTGC TAATTATATGCGAACGTGGCCTAATATTTTTCTAATTTTATGCAGCCTGATCGTGTCACAGACTTCTGTAAGAGAAATAA ATTACAGCTCATAATAAGGGCCCATGAATGCGTCATGGATGGTTTTGAGCGATTTGCCCAGGGACAATTAATCACCCTTT TTTCCGCAACTAACTATTGCGGTAAGCATAATTTCTCACCAGCTTTCTCCTTTGCATGTGATAGCATTTCAATCTCATAT TTGGTATGTTATTTAGGAACTGCAAACAATGCGGGAGCTATACTGGTAATTGGTAGGGGTTTGGTTGTGGTTCCAAAGTT GATTCATCCTATACCACCTCCCCTTCAGTCACCTGAAACATCTCCAGAGCGTGTGATGGATGAGACATGGATGCAGGTGA GCTTAATATTTTGTTTGTTCTGACTTAATAGCATGTTTGGATCAGCTTGTTTTTCCGCGGAATCAATTTGGTTGCTCAAA AGCTTCAGTGTTTGTAAATTCTTCTAGAATTGATTTTGGGAGAAGTTTCTGGGTGACATTATTGATTTTGAGGAAAAAGA AGCTAATCTAAACATGCTATGCTTTTCCCCAAAATTGATTTTGGCTTTAGAACCAACCGTAAAATGATTTCCAATCATGC ACTTATTCTAGGAGCTTAATGTTTTGCTGGTTATTATTCTAGGAGCATAATATTTTGTTTGTTCTTACTTATTATAGGAA CTTAATATTCAGAGGCCGCCAACTCCTACTAGGGGTCGACCACAGCCTGACCTTGATCGTGGCTCTCTAGCATATATATG A
CDS sequence (LotjaGi5g1v0261000.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGAAAATGATGGAATATGGGCATGGACGCGATTCAATCAACTTTTTAACTTTCTTCCACTAGCTGCTCTTATTGA AAAGAAAATTATCTGTATGCATGGTGGGATTGGAAGATCTATCAATTCGGTAGAACAGATAGAGAAGCTTGAGAGGCCCA TAACAATGGATGCAGGATCCATCATTTTAATGGACCTTTTGTGGTCTGATCCCACAGAAAATGATAGTGTAGAGGGTTTG AGACCAAATGCTAGAGGGCCAGGGCTTGTCACTTTTGGGCCTGATCGTGTCACAGACTTCTGTAAGAGAAATAAATTACA GCTCATAATAAGGGCCCATGAATGCGTCATGGATGGTTTTGAGCGATTTGCCCAGGGACAATTAATCACCCTTTTTTCCG CAACTAACTATTGCGGAACTGCAAACAATGCGGGAGCTATACTGGTAATTGGTAGGGGTTTGGTTGTGGTTCCAAAGTTG ATTCATCCTATACCACCTCCCCTTCAGTCACCTGAAACATCTCCAGAGCGTGTGATGGATGAGACATGGATGCAGGAACT TAATATTCAGAGGCCGCCAACTCCTACTAGGGGTCGACCACAGCCTGACCTTGATCGTGGCTCTCTAGCATATATATGA
Protein sequence (LotjaGi5g1v0261000.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGENDGIWAWTRFNQLFNFLPLAALIEKKIICMHGGIGRSINSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSVEGL RPNARGPGLVTFGPDRVTDFCKRNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVIGRGLVVVPKL IHPIPPPLQSPETSPERVMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 212 | 212 | 3.3E-134 | – | |
| PANTHER | 1 | 212 | 212 | 3.3E-134 | – | |
| SMART | 1 | 165 | 165 | 9.2E-13 | ||
| Gene3D | 2 | 190 | 189 | 2.1E-55 | ||
| Pfam | 8 | 116 | 109 | 9.8E-13 | ||
| SUPERFAMILY | 10 | 173 | 164 | 1.02E-48 | – | |
| PRINTS | 15 | 41 | 27 | 8.5E-26 | ||
| PRINTS | 45 | 72 | 28 | 8.5E-26 | ||
| PRINTS | 105 | 125 | 21 | 8.5E-26 | ||
| PRINTS | 127 | 143 | 17 | 8.5E-26 | ||
| MobiDBLite | 187 | 212 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi5g1v0261000.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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