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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0265800 |
Transcript ID | LotjaGi5g1v0265800.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase-like protein; TAIR: AT3G10540.1 3-phosphoinositide-dependent protein kinase; Swiss-Prot: sp|Q9XF67|PDPK1_ARATH 3-phosphoinositide-dependent protein kinase 1; TrEMBL-Plants: tr|A0A0L9TFD6|A0A0L9TFD6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0265800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:57672261..57676354) extracted from Lotus japonicus Gifu genome v1.2.
AAAACAAGAGTAAATTACACTGGCAAACATTCTGCCTTTGTTTGTGCAGAAAGGTCGTCTAACTGAGGATGAGGCACGAT TCTATGCAGCTGAAGTTGTGGATGCTCTCGAATACATACATAATTTGGGAGTGATACATCGTGATATTAAGGTAGCTCTG TGGCATGATTATACTTTGTTGAGATATATGGCCGTGTGTGACAATTAAATTTCTCCAATTGCAGCCAGAGAACTTATTAC TTACGGCAGAAGGACATATTAAAATAGCTGATTTTGGGAGTGTGAAGCCAATGCAGGATAGCCAAATCACTGTCCTTCCA AATGCAGCTTCAGGTAAAATTGGAGATATGTCGAAGCTGCTTTTTTTACTTTATGGCTATTCTTTTATGTTGTCTTCATT CATTTGTTTAAAAATTTCTAGATGACAAAGCCTGCACATTTGTGGGAACAGCTGCTTATGTCCCTCCAGAGGTTCTTAAT TCCTCTCCAGCAACTTTTGGGTAGGGACTATATTCAAATGAATCTTATTGTTATGTTAATATTATCTCATGCCAGTTTTA TGTTTGTAGGTTGTTCTTAAAATTGGTTCGTGATTTTTTTCTTCTAAATTAATGAATTTTTGACAATTCAGATTTCAAGT TTGTTCGTTCTTTGAATTTCTATTTTGCTTTTGTTTCATGCCAGGTCCCCATATAATAACTTTTTATATGTTTTGTTTTT CTTCCCTCAATATTTTACCACAGAAATGACCTCTGGGCACTTGGTTGCACATTATACCAAATGCTATCTGGAACTTCCCC TTTTAAAGATGCAAGTGAATGGCTTATTTTCCAAAGAATTATAGCAAGAGAAATTCGATTTCCAGATTACTTTTCAGATG AAGCAAGAGACCTTATTGACCGTCTATTGGTTAGTACTTAAGACTGTACACTGAAATCCCAGCATCCCTTGTGTGCGTTC TAATTCTTATACATTTCTACAGATTTTACAAATTATCCTCATCCTATTTTTGTAACCTGTAATTCGCTATACTTAATTTG ACTAACAAGCATAAAGTAGAGTGAAATCTAGAATTATAGCGTTTCTTTTCTGGTTTTCCTGTAAGATAGTATAATAAGAT AGGGTGATGTGCAAACACAAGTTTGTTTGTTTTTTTTCCTGTTGATTTGGGTATAAAATAGTCATTTTCATTCCTATAAA GCTGTTACCCTTGGGAAGAAAAGCTCATCTAAAGTAAAATTGTGTGTAATGTGTGGAAGTACGTGTGATTTAAAGTGTTT TTTTCTTCTGTTATTCTGTATGCATACATATGAATTTATATGCATATTGAAGGAGGCCTAACTTAACCCAAAAGCTAGCT CAAGAGTTAAGGTTTGCACAACCATATATAAGCAATTGCTTGGCCACATCTCTAGCCAATGTGGGACTCTAACACACCCC CTCACGCCCAGTGTAGAACATCTGGAGCGTGGAATGAAACTGATGGCCCAAATATGGGAGGTCTCCACAACAAATGGATC TAGGATAGGGGCCCAGGCCCATGGTCAATCAACCATTGGCTCTGATACCATGTCAGACAACCACTTAATCCCAAAAGCTT AAGCTGTTGGGTAAGGGCCACTTTAATGGTTTTATATTATACTCTAACACACCCCCTCACACAAGAGCCCTTTGGGCTTG AAGCGTGGATAAATGCACAGGCCCACCTACTATGGGAGGTCTCCACAACAAATGGATCTAGGATAGGGGCCCAGGCCCAT GGTCAATCAACCATTGGCTCTGATACCATGTCAGACAACCACTTAATCCCAAAAGCTTAAGCTGTTGGGTAAGGGCCACT TTAATGGTTTTATATTATACTCTAACACACCCCCTCACACAAGAGCCCTTTGGGCTTGAAGCGTGGATAAATGCACATGC CCACCTACTATGTGCTTAATTAAATTCCACTTTTTAATTAGAAAGTGAGGGGAGCAAGGATCGAACTCTAGACCTTTCGG TCATAGAGGCTCTGATACCATGAAGGAGGCCTAACTTAACCCAAAAGCTAGCTCAAGAGTTAAGGTTTGCACAACCATAT ATAAGCAATTGCTTGACCACATCTCTAGCCAATGTGGGACTCTAACACATATACATATACAGGAAATTTTCTAAGTCTTA AGATTAATCTTTTTGATATACGATTAACACCAACCTCCCCAATTAAAGGTATAATCCTGATTATGACTACTATGAGTATT GTAACTATGATGCAGGATTTGGAACCCAGCAGGAGACCAGGTGCAGGATCTGATGGTTATGCAACTTTGAAAAGGCATCC CTTTTTCAAGGGGGTTGACTGGGATAACTTAAGGGTACAGGTTCCCCCAAAACTTGCTCTGGAACCTGGGGTTAGTGGGG TATGACTTCCCTTGCTTTGCTTGCTCTTTCAAATGTTATTTATAGAGAATAAGAAAAGGAACCTTCATTTCCTGTCCACT TTATTAGTTTTAAAACACAATTTCTAACTATCATTTTCACTTCTAGACTCAGTCGCCTGCGGGTGATGATGCTCAGGACT CGTCATGGAGTCCTTCTCACATTGGGGATGGCTCTGCAGCTTCTGTTAGACAACCTGATGGAGCTACATCATCTACGGAA GGGACTGGTCACATAACCAGGCTAGCTTCAATTGATTCGTTCGATTCAAAATGGTATGCTGAAACCTTCCTGTTTATCTG TGAATTTTGTGTCTGATAATTTTCTGAAAAAGAAAAGAGGGCAAACCTGGTACTATAAATTTCCTGCTATGCGTGAGGTT TAGGGAAGGGTCAGACCCATTTTGTGGACCTAATGTGGGCAGCCTTACCTTGCAGTTTTCCAAGTGGCTGATTCCACGGT TTGAGCCTTTGACGCAAAGTCACATGGCAGCAACCTTACGTTGCGCCGAGGCTCGCCCTCTAATATCCAATCTTGTTCTA ATGACATGAAATTGGTGTGATGTATTCACATAAATCATTGTTCCTCTGTCAGTTGTGTAACCTTAATAAGCTCAAATGCT AGTAAATAAGCTCGGATTTCGTCAAATAAAAAAAAACTTCAAAATATGTGTCCAGGGAGAATTTTAGAAGCAATATCCTG TGTTGTGAATTTTTTTTTGGAATGAAGCATCTCCTTTTATTTTATGTTCTTCAAGTTCTGGAGCTTTTCAAATCACCGAA AACCAGGGATTACAGTTTTAATATTCAGTTGCTAAATCCTTAGAGGACTAAACCTGTTCAGGTCTCATAGTCATATGCCA TATTGATTGAGTTATGTTGATTTACACGCATGTTTATATTCCCTTATGATCTCAACCTGTTAGGTTTTCATCTATTTTAC ACATCACCTGTCCCATCAATTTCACATTTTATGGAGATATAAGTAATATAATAGTACATTCCTGCAACCCGCAGAAAATA ATGGGAGAGTTAAAAGAGCATTTTGAAAACTCTTGTACACAGGCTATTTAAAAAGCCCATGCTTACCTGGCTTATCAACT AAGTCATTTTTTGGGCTCATCTAACAGGCAACAATTTTTGGATCCTGGCGAATCTGTTCTTATGATCTCTATGGTGAAGA AATTACAAAAACTAACAAGCAAGAAGGTGCAGCTCATCCTTACCAACAAACCGAAGTTGATCTACGTGGATCCGTCAAAA TTACTTGTGAAAGGAAATATAATATGGTCTGATAATCCAAATGATTTAAGCATTCAAGTGACTAGTCCTTCACATTTCAA GATTTGCACAGTAAGTTTTCTCTGCTCTATAGGATCTTGCTATACAATTTGCACTATTTGTAAATAAAGGTAGACAATGG CAGCCATGCTAATAGTTGAAACTTGAAAGGGCTATAATTTAAATTCTTTTCATACCATGTTCAAGAAAGTGATTTTCCAT TACTTGTGATGCACTTCCACTTATATAATCTATTCTATTTATGTTTTGGGACTTTCCTTCACATTTTCCTTATCAAATCT AATGATGCAGCCTAAAAAGGTAATGTCGTTTGAGGACGCGAAGCAAAGAGCATCTCAGTGGAAGAAGGCAATTGAAGGAC TTCAAAACCGGTGA
CDS sequence (LotjaGi5g1v0265800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGGATAGCCAAATCACTGTCCTTCCAAATGCAGCTTCAGATGACAAAGCCTGCACATTTGTGGGAACAGCTGCTTA TGTCCCTCCAGAGGTTCTTAATTCCTCTCCAGCAACTTTTGGAAATGACCTCTGGGCACTTGGTTGCACATTATACCAAA TGCTATCTGGAACTTCCCCTTTTAAAGATGCAAGTGAATGGCTTATTTTCCAAAGAATTATAGCAAGAGAAATTCGATTT CCAGATTACTTTTCAGATGAAGCAAGAGACCTTATTGACCGTCTATTGGATTTGGAACCCAGCAGGAGACCAGGTGCAGG ATCTGATGGTTATGCAACTTTGAAAAGGCATCCCTTTTTCAAGGGGGTTGACTGGGATAACTTAAGGGTACAGGTTCCCC CAAAACTTGCTCTGGAACCTGGGACTCAGTCGCCTGCGGGTGATGATGCTCAGGACTCGTCATGGAGTCCTTCTCACATT GGGGATGGCTCTGCAGCTTCTGTTAGACAACCTGATGGAGCTACATCATCTACGGAAGGGACTGGTCACATAACCAGGCT AGCTTCAATTGATTCGTTCGATTCAAAATGGCAACAATTTTTGGATCCTGGCGAATCTGTTCTTATGATCTCTATGGTGA AGAAATTACAAAAACTAACAAGCAAGAAGGTGCAGCTCATCCTTACCAACAAACCGAAGTTGATCTACGTGGATCCGTCA AAATTACTTGTGAAAGGAAATATAATATGGTCTGATAATCCAAATGATTTAAGCATTCAAGTGACTAGTCCTTCACATTT CAAGATTTGCACACCTAAAAAGGTAATGTCGTTTGAGGACGCGAAGCAAAGAGCATCTCAGTGGAAGAAGGCAATTGAAG GACTTCAAAACCGGTGA
Protein sequence (LotjaGi5g1v0265800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIAREIRF PDYFSDEARDLIDRLLDLEPSRRPGAGSDGYATLKRHPFFKGVDWDNLRVQVPPKLALEPGTQSPAGDDAQDSSWSPSHI GDGSAASVRQPDGATSSTEGTGHITRLASIDSFDSKWQQFLDPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPS KLLVKGNIIWSDNPNDLSIQVTSPSHFKICTPKKVMSFEDAKQRASQWKKAIEGLQNR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
ProSiteProfiles | 1 | 120 | 120 | 18.139 | ||
SMART | 3 | 120 | 118 | 8.6E-4 | ||
Gene3D | 14 | 134 | 121 | 2.2E-36 | – | |
Pfam | 15 | 120 | 106 | 4.7E-18 | ||
SUPERFAMILY | 16 | 142 | 127 | 1.78E-31 | ||
PANTHER | 16 | 173 | 158 | 6.4E-40 | ||
PANTHER | 16 | 173 | 158 | 6.4E-40 | – | |
SUPERFAMILY | 114 | 297 | 184 | 7.87E-27 | – | |
MobiDBLite | 137 | 181 | 45 | - | – | |
MobiDBLite | 146 | 181 | 36 | - | – | |
Gene3D | 175 | 298 | 124 | 2.5E-26 | ||
Pfam | 195 | 297 | 103 | 5.0E-31 | ||
Coils | 278 | 298 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0265800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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