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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0265900 |
| Transcript ID | LotjaGi5g1v0265900.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Exostosin-2; TAIR: AT5G04500.1 glycosyltransferase family protein 47; Swiss-Prot: sp|Q84WB7|GT645_ARATH Glycosyltransferase family protein 64 protein C5; TrEMBL-Plants: tr|K7LKG4|K7LKG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0265900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:57681879..57686404) extracted from Lotus japonicus Gifu genome v1.2.
GGCGGAGGCGGCGGTGGTTCTAGTGGTGGTGGTAGCAGTAGTTGCTGTGACATGAGTCTCAAGTGTTGGTGTAGGTGGAG ATTGGAGGGCCAACAGTGTTATAACCGGTTCTTCTCTTCTGGTTTCGTTTTCTTCTTCGGGTGTTTCGTTTTGTTTGGAT CGATTGCTACCCTTTATGGTTGGCTCGCTTTTTCTCCCACTGTGCACACTGCTTTGTCTCCTTTTGGTTGTCAAGTTGAC AATGAGGGTTCTTGGTCAATTGGGATTTTCTTTGGTGACTCTCCTTTCTCTCTAAAACCCATAGAGTCTGTAAGTTTCTT CTATCTCTCTCTAATTTGCTCTTTTTTTGTCCTTGGGGTTTTTTTGTGGGTTTACTGTGTTATTTTTCATATGCATGGTT GTGTTAATTGTTAATTTCTCTCTGAAAGTTGTCAATTTTTGAAAGAAAAATTAGGATAAAAGTGATTTTATTTTTGCAAG TTTTCACACACTCTAGATGATGATTACTTGAGTAGTGTTTGGTATTATGGAGTATGATGTTGAAAATTTTGGTTTTGTTC TGGTGAATTGATCAAATATGAAATTATTTCAATTGGGAATTTGTTTTGTGATGTGAATTTGAGGGATGAAATTGTTTCAG TTCGTTTCAGTTGATGGTTTTGGTTCTGTGCAGACGAATGTATCGAATGATGACAGCGCTGCTTGGCCGGTTGCGAACCC CGTGGTGACGTGTGCCTCGGTCTCTGATGCTGGTTTTCCCAGTAATTTTGTTGCTGACCCTTTTCTTTTCATTCAGGTAA TAGGGTCTTGTCACTCTAGCTTCCTTCATATATTTGATGTTTCAGATTCTTTGATATAGTTCAAGTCCCTTTCCCTTGCT GTTTTTTGTTCTATTTGTACATTTTTTGCCAGCAAAATTCTACCTATGTTTACATGCCGTTTTTTTTGGCCAAGTCAATG TTTGGATTCAACCACTAATCCACAATGATAGAAGCCTGGTGTTAGAAAAAGATAATACATCAGTTTGTCTTTATTTCTAC AATTAATTTGCCTGTTTTTGGAGATATTTGCTTGGAGTTTAAATTTGACACGAAGCAGTTGTTTAGGCTTTTTCTCAGGC TGAAAGAAGCCTGGATCTAAACTAGTAATATTTTGTAGTTGCTTGAGGTAATTCCAGAATTATTTATGGTAAATGAGAAA CCATCAAACCGTTGAAAATTTGAAGATGGAGGTCAGAAAATGTCTAAAACATTAAATTGAGAAATGAGATGAAAATTTAT AGCTAGGTTGGGTTCATGTGATATCTTGTATGTTTTTATTGTCTGCAAAATCCTGCTCCTAAATACAGGTTAGGTTGTGT GGGTGACGATTTCACAGTAAACCCGTCTATTTTTTGTACTGTTAAGGAGCTAATATCAGTTTACTGAATAACAAAAGTTG GCTTCTACTTACTCACTGTATGTATCCTTCTGAGTTGTGCTGTCATCACATAGCTGATAACTATACTAATTGGGGTCCTC TTTTGGATTTAAAAAGAAACATGGGGCCCTCTTGGTCATCCATATATTGAAGATTTTGACTAGTTTTATGTTGGCTGCCG AGGCCTAACACAACCCTCTTGGTTATCCATGTTGTAAAATTTATAATAAAGCTAGTAGGAATAGGTCCAATTATATAGTG AGCGCCTTGAATAGTTGCATAATCTCCATTTTATCAATTTTTATTTTAAAATTTACATTTTGATTCAACTAGTGGTACTT ACTGCGTAGAGGTGATTTATTGAGTACTGTCAACCTGATTTTTCTGCCTTTGGACCATCATATTTTGCTTGGGGTAGGAA AAAATACTGTGTAACATCCCTGAAAGTTCTTTTCTGGAGTTGTAAACGAAGTTGCTTTCTTACAAGGATGGACAATTGTA GACTCTACATTTGAACTATGTAGGTTTTTCTAAGTGTCTTTAAAAAGAGTGGCCTCATAGACAAGGCTCTCACCACAGTA GGAAGAATGTTTGAGTTTTGTCAAGGGAAGATATAACAGGTGAATTAGGTCCAATATTGGATAACAGGGTGGCATTTCTA TGGACTTGTTCTGACAAAACGAGTAGTGCCTTTCGTGCATTTTACTCTTAAATAGTAAAATTTCATAATGGATAGAATCA ATTTTTTTTATCTCCTCTGTCAAATTTGTCTGCCTAACAGTCAGTTTATCAGTTGCTTCTGAAAGGTTACAACAAAATAT TGCCTTCATTATTTGTGTTTGTATCTACTTCAGCCTTATGCCCATATAGGTGTCTGTCCATCGTTTAAACTATTTATCTT GTTGGTTTGAAACCTGAGTTTGTACTTTGTACTAATGTTTGATAGACAGTTTCCAAAGAAAATATAGTATTCAAAAAGCC TATAAATGTTTGTATTTTTACAAATCAGGACATGCTTGATCATGTTTTATGTAGATATATCAGTGATGACCGATGAGAAA TATTAATGGAAAAGAGTTAATATCACATTATGAACTATTCACTGATATGACATTTGCAATTCAGGGAGATACTCTGTACC TGTTCTATGAGACAAAGAATTCAATAACAATGCAAGGTGATATCGGAGTTTCAAAAAGTACTGATAAAGGAGCAACATGG CAACAGCTAGGAATTGCCTTGAATGAGGATTGGCATCTTTCTTATCCATATGTTTTTGAGCATGATGGCCAGGTATTTTT CCTAAGAAATGATGTGTTTGTTCATGCATTTGAACTTGTCTAATGGCTCATTTACGACTTAAACTTGTCATTATAGTTGT TGTGATCCTCATTTTTCTTTTCCCAATTGTAACTTCACAGATATATATGATGCCTGAGGGAAGTAAAAGAGGAGATCTTC GTCTCTACAGAGCAGTTAACTTCCCTTTGCAGTGGAGATTGGAAAAGGTCATAATGAAAAAGCCCCTTGTTGATTCCTTC CTTGTCAATTATGGTGGTAAGTATTGGCTTTTTGGCTCAGATCATAGTGGTTTTGGCACGAAGAAGAATGGGCAGCTTGA GATTTGGTATAGCAGTTCACCTCTTGGTCCTTGGAAACCTCACAAGAAAAATCCCATTTATAACATTGACCAGAGCTTGG GAGCTCGCAATGGAGGCAGGCCATTTGAATATGAAGGAAATCTTTATCGTATGGGTCAGGACTGTGGGGATACATATGGG AGACGGGTGCGTGTTTTCAAGATAGAAACTCTTACTATTGAAGACTACAAAGAAATTGAAGTTCCATCGGGGTTTGTTGA GCCAAACAAGGGGCGAAATGCTTGGAATGGTGCTAGGTACCATCACTTGGATGCGCAACGTCTGCCATCTGGTGGCTGGG TTGCTGTTATGGATGGGGATCGTGTTCCCTCCGGGGATTCAACCCGGCGGTTCATGGTTGGTTGTGCTTCTGTTACAGTT GCTGCTGCGCTCATTTTGCTATTGGGCGTGTTACTCGGATTTGTAAATTGTATTGTTCCTCTCAATTGGTTCATTCATAA CTCTGGGAAGAAGAATGTTGCTATATTGTCTTGGGAAAGATCAAATGTGTTCTCTTCAAAAATAAGACGGTTTTGCAGCC GCTTGAACAGGGCCCCAAATTTTCTCCGGGGCAAGATAAAGCACAATGCTTGTGCCAGGAGGTTTGTTCTTACTGTAATA TTTGTAGTGGGGGTCGGATTGATGTGCGTAGGATTTAAAAATATCTACGGGGGTAATGGTTCAGAAGAACCTTATCCATT CAAAGGACAATATTCCCAGTTCACCTTATTGACAATGACCTACGATGCTCGTCTCTGGAACTTGAAGATGTATGTGAAAC ACTACTCAAGGTGCTCTTCTGTAGGGGAGATAGTTGTGGTGTGGAACAAGGGAGTCCCTCCAGAATTGAGTGATCTAGAT TCTGCAGTACCAGTGAGGATCAGAGTAGAGGAGAAGAACTCTCTCAACAATCGCTTCAAGGCTGACCCGTTGATAAAGAC ACGCGCTGTCCTCGAGCTTGATGATGATATTATGATGACATGTGACGATGTTGAGCGAGGTTTTAACGTGTGGCGTCAGC ATCCGGACCGTATCGTTGGATTCTATCCTCGGCTTATCAGTGGGAGCCCACTGAAATACAGGGGAGAAAAATATGCCAGA AGCCATAAAGGGTACAACATGATTCTCACCGGCGCAGCGTTTATTGATTCCCAAGTAGCTTTCAAGAGGTACTGGGGTGA GGAGGCCAGGCAAGGGAGGGAAATGGTGGACAAGTTTTTTAACTGTGAGGATGTGCTTTTGAATTATCTGTATGCAAATG CGAGCTCATCGTCGAGGACGGTTGAATATGTGAAACCGGCTTGGGCCATTGACACTTCAAAGCTTTCTGGCGCGGCTATT AGCCGGAACACGAAGGTGCATTATGGATTGAGAAGCCATTGCCTTATGAAATTCTCAGAGATGTATGGAAGCTTAGATGG TCGGAAATGGGGATTTGACAGTAGGAAAGATGGTTGGGATGTATAG
CDS sequence (LotjaGi5g1v0265900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTCTCAAGTGTTGGTGTAGGTGGAGATTGGAGGGCCAACAGTGTTATAACCGGTTCTTCTCTTCTGGTTTCGTTTT CTTCTTCGGGTGTTTCGTTTTGTTTGGATCGATTGCTACCCTTTATGGTTGGCTCGCTTTTTCTCCCACTGTGCACACTG CTTTGTCTCCTTTTGGTTGTCAAGTTGACAATGAGGGTTCTTGGTCAATTGGGATTTTCTTTGGTGACTCTCCTTTCTCT CTAAAACCCATAGAGTCTGGAGATACTCTGTACCTGTTCTATGAGACAAAGAATTCAATAACAATGCAAGGTGATATCGG AGTTTCAAAAAGTACTGATAAAGGAGCAACATGGCAACAGCTAGGAATTGCCTTGAATGAGGATTGGCATCTTTCTTATC CATATGTTTTTGAGCATGATGGCCAGATATATATGATGCCTGAGGGAAGTAAAAGAGGAGATCTTCGTCTCTACAGAGCA GTTAACTTCCCTTTGCAGTGGAGATTGGAAAAGGTCATAATGAAAAAGCCCCTTGTTGATTCCTTCCTTGTCAATTATGG TGGTAAGTATTGGCTTTTTGGCTCAGATCATAGTGGTTTTGGCACGAAGAAGAATGGGCAGCTTGAGATTTGGTATAGCA GTTCACCTCTTGGTCCTTGGAAACCTCACAAGAAAAATCCCATTTATAACATTGACCAGAGCTTGGGAGCTCGCAATGGA GGCAGGCCATTTGAATATGAAGGAAATCTTTATCGTATGGGTCAGGACTGTGGGGATACATATGGGAGACGGGTGCGTGT TTTCAAGATAGAAACTCTTACTATTGAAGACTACAAAGAAATTGAAGTTCCATCGGGGTTTGTTGAGCCAAACAAGGGGC GAAATGCTTGGAATGGTGCTAGGTACCATCACTTGGATGCGCAACGTCTGCCATCTGGTGGCTGGGTTGCTGTTATGGAT GGGGATCGTGTTCCCTCCGGGGATTCAACCCGGCGGTTCATGGTTGGTTGTGCTTCTGTTACAGTTGCTGCTGCGCTCAT TTTGCTATTGGGCGTGTTACTCGGATTTGTAAATTGTATTGTTCCTCTCAATTGGTTCATTCATAACTCTGGGAAGAAGA ATGTTGCTATATTGTCTTGGGAAAGATCAAATGTGTTCTCTTCAAAAATAAGACGGTTTTGCAGCCGCTTGAACAGGGCC CCAAATTTTCTCCGGGGCAAGATAAAGCACAATGCTTGTGCCAGGAGGTTTGTTCTTACTGTAATATTTGTAGTGGGGGT CGGATTGATGTGCGTAGGATTTAAAAATATCTACGGGGGTAATGGTTCAGAAGAACCTTATCCATTCAAAGGACAATATT CCCAGTTCACCTTATTGACAATGACCTACGATGCTCGTCTCTGGAACTTGAAGATGTATGTGAAACACTACTCAAGGTGC TCTTCTGTAGGGGAGATAGTTGTGGTGTGGAACAAGGGAGTCCCTCCAGAATTGAGTGATCTAGATTCTGCAGTACCAGT GAGGATCAGAGTAGAGGAGAAGAACTCTCTCAACAATCGCTTCAAGGCTGACCCGTTGATAAAGACACGCGCTGTCCTCG AGCTTGATGATGATATTATGATGACATGTGACGATGTTGAGCGAGGTTTTAACGTGTGGCGTCAGCATCCGGACCGTATC GTTGGATTCTATCCTCGGCTTATCAGTGGGAGCCCACTGAAATACAGGGGAGAAAAATATGCCAGAAGCCATAAAGGGTA CAACATGATTCTCACCGGCGCAGCGTTTATTGATTCCCAAGTAGCTTTCAAGAGGTACTGGGGTGAGGAGGCCAGGCAAG GGAGGGAAATGGTGGACAAGTTTTTTAACTGTGAGGATGTGCTTTTGAATTATCTGTATGCAAATGCGAGCTCATCGTCG AGGACGGTTGAATATGTGAAACCGGCTTGGGCCATTGACACTTCAAAGCTTTCTGGCGCGGCTATTAGCCGGAACACGAA GGTGCATTATGGATTGAGAAGCCATTGCCTTATGAAATTCTCAGAGATGTATGGAAGCTTAGATGGTCGGAAATGGGGAT TTGACAGTAGGAAAGATGGTTGGGATGTATAG
Protein sequence (LotjaGi5g1v0265900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLKCWCRWRLEGQQCYNRFFSSGFVFFFGCFVLFGSIATLYGWLAFSPTVHTALSPFGCQVDNEGSWSIGIFFGDSPFS LKPIESGDTLYLFYETKNSITMQGDIGVSKSTDKGATWQQLGIALNEDWHLSYPYVFEHDGQIYMMPEGSKRGDLRLYRA VNFPLQWRLEKVIMKKPLVDSFLVNYGGKYWLFGSDHSGFGTKKNGQLEIWYSSSPLGPWKPHKKNPIYNIDQSLGARNG GRPFEYEGNLYRMGQDCGDTYGRRVRVFKIETLTIEDYKEIEVPSGFVEPNKGRNAWNGARYHHLDAQRLPSGGWVAVMD GDRVPSGDSTRRFMVGCASVTVAAALILLLGVLLGFVNCIVPLNWFIHNSGKKNVAILSWERSNVFSSKIRRFCSRLNRA PNFLRGKIKHNACARRFVLTVIFVVGVGLMCVGFKNIYGGNGSEEPYPFKGQYSQFTLLTMTYDARLWNLKMYVKHYSRC SSVGEIVVVWNKGVPPELSDLDSAVPVRIRVEEKNSLNNRFKADPLIKTRAVLELDDDIMMTCDDVERGFNVWRQHPDRI VGFYPRLISGSPLKYRGEKYARSHKGYNMILTGAAFIDSQVAFKRYWGEEARQGREMVDKFFNCEDVLLNYLYANASSSS RTVEYVKPAWAIDTSKLSGAAISRNTKVHYGLRSHCLMKFSEMYGSLDGRKWGFDSRKDGWDV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| ProSiteProfiles | 1 | 31 | 31 | 5.0 | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 20 | 45 | 26 | - | – | |
| Phobius | 46 | 332 | 287 | - | – | |
| Gene3D | 78 | 260 | 183 | 4.4E-15 | ||
| SUPERFAMILY | 83 | 286 | 204 | 4.97E-22 | ||
| PANTHER | 87 | 699 | 613 | 1.0E-275 | – | |
| PANTHER | 87 | 699 | 613 | 1.0E-275 | ||
| CDD | 88 | 241 | 154 | 4.20842E-6 | – | |
| Phobius | 333 | 363 | 31 | - | – | |
| TMHMM | 341 | 363 | 23 | - | – | |
| Phobius | 364 | 416 | 53 | - | – | |
| TMHMM | 417 | 439 | 23 | - | – | |
| Phobius | 417 | 438 | 22 | - | – | |
| Phobius | 439 | 703 | 265 | - | – | |
| Gene3D | 452 | 692 | 241 | 5.6E-68 | ||
| SUPERFAMILY | 455 | 685 | 231 | 4.5E-16 | ||
| Pfam | 456 | 686 | 231 | 4.1E-60 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transferase activity, transferring glycosyl groups | Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi5g1v0265900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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