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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0267700 |
| Transcript ID | LotjaGi5g1v0267700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase; TAIR: AT1G25570.1 Di-glucose binding protein with Leucine-rich repeat domain-containing protein; Swiss-Prot: sp|Q9ZQQ7|Y2144_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440; TrEMBL-Plants: tr|A0A072VPY1|A0A072VPY1_MEDTR Carbohydrate-binding protein of the ER protein; Found in the gene: LotjaGi5g1v0267700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:57993761..57999384) extracted from Lotus japonicus Gifu genome v1.2.
TAGCTGAGCTGTTGAACACCATGTTAGTTGATTTGGCGCCAGAAGCATTTATAAAGAAAGAAAACAAAATAAATAAAAAC CGTTGAATTCAATTCAACATCTTCCTTCTTTCTATTTTCTCCCGCTAATCTCGGCACTTTCTCTCCATTACATTTTCCTT CCATTTTCTTTATCAACATGCCCCTATCCCCACTTCACTTTCTCTCCAACCAACAACACCACAATGATTCCACTATCCTT CTCCCCATTCTCCTTCCTCTCATTTTCCCTCTTCTTCTTCACAGCTTCCTCTTTCTCTTACCACATTAACTGCGGCACTT CAACAAACACCTCAGACGCATTCAACACAACCTGGCTCTCCGACCGCTTCTCCACCGCCGGCACCACCGCAATCGTCTCC GAGCCTCTCCGCTTCCACCGCCCCTCCGAGAAAACCCTCCGCTTCTTCCCTCCTTCCTCCTCCGGCAAGAAAAACTGCTA CTCCTTCCCTTCCTCAACATTCCCCGCCGGCAGATACCTCCTCCGCACCTTCACCGTCTACGACAACTACGACGCCAAGT CCCGTCCTCCCTCCTTCGACGTCGCCCTCGACTCCACCATCCTCTTCAGCTGGCGCTCTCCATGGCCTGAATCAACCTCC CGCGACGGCGCCTACTCTGATTTCTTCGCTTTCCTCAACACCTCCTCCGCCGCCGACCTCTGCTTCTACGGCTACGCCAC CGACGCTCCGATTGTTTCCTCTGTTGAGCTCTTCCAGGTCGACGCTACCTCCTACGACTCCAACTCCACCGGTGATAACC TCATCCTGGTCAACTACGGCAGAATCTCCTGCGGCTCCGGCGACCACTGGGGGCCTGGTTTCACCAACCACTCCGATCGC TTCGGCCGGTCATGGCAGCCGGACTTGACCTTCCGGGCCAGACCCACCGCTGTCGTCCGGGTGGTTTCGACGGAGAATGC AGTGACCGGAGCCGAGACTGGGCCGAATTATTTTCCGATGAGGCTGTACCAGATGGCGGTGACGGTGGAGGAGGGGGTGT TGGAGTACGAGTTGGGTGTGGACGCGAAGATGGACTACATGGTGTGGCTGCATTTTGCGGAGATTGATTCCACTGTGAAG AAAGCAGGGGAGAGGGTTTTTGATGTGTTCATCAATGGTGACAATGTGAGCAGGGTTGATATATTCAAGGAAGTGGGTGG CTTCTCTGCGTTCACTTGGCATCATGTTGTTAAGAATTTGAGCTCTAATGTGTTGGGTCTCAAGCTTGTGGCTTCTGTTG GTGCCCCTCTGATCAGTGGCATTGAGAATTATGCATTGGTTCCTAATGATCCTTCCACTCTCCCTCTTCAAGGTTTGTGT TCGGAAAAAATTGATGTTTTGGTTTGTGAATTGTTTGGATTAGGAGAAGACTAATGGGTGGTTTTTGTAATTGTAGTGAG TGCCATGAAGGCGTTGAAGGAATCGCTTCGTGTTCCGGATAGAATGGGTTGGAATGGTGATCCTTGTGCACCTACTTCTT GGGATGCTTGGGAGGGTGTTACTTGCCGCATGAGTAACAACAAAACTGCTCTCATCATAACTGAAATGTAACCTTAATTT CCTTCCATCTTAACAATCAAAACATGTCAACTTTATGTCCCTTGTGCTAAATTACTTCATGTTTAAGGTTAAAGGTGGAA TATGCCATCTAAGTGTCTAACATACCCTTGATATCTTGTTTGAACATATAGCATTTTCCTTGTATAATGACCTCGAGTTG ATAGTTGATTGGGTTCAACTCCTGCTCCTCAAATGAATAGTTTAATTATTGAACCAAAACAGGAAAAGAAGTAGGTTTCG AGTTAGTGAGTTAAATGCTGTTTCTTGTTCAGGCAGTAGTTCAACTTTCTCTGTTTACTTTCCTCTCCCGGAGCTTTGCT TTTATATTTGTTTGTACTTTCATTTCAGAGATCTTGGTAGTCAAGGACTGAAAGGATACATAAGTGACCAGATTAGTCTT TTGTCAGACTTAGTAAGCCTGTAAGTATCAGCTGCCAAATCATTACAATTTTCATCTGCTATATACATTTTTCATATCAT GTAACTTAGATGTATTAGGTTTACCTCATACTAACATGCAGTAAGAAATATACTGATTGACTTATATCAGTAACTTTTTC CCATGTTTAGCCACTCTTGCTCATATGTTCTTGCAATACCCGTGATCTGCAGTTATTATGTATTTTGACTTATCTTAACC TTTCAATTTAGAAATTAAGAACACTATGAACATCCGTTTAATACCTGATCAGCTTTGGTACTTTTAAGTCAAGCAAATTT ATTCTTTCATTTTGGTGGATATAGTATCAATATTCTGATATGTTGAACCATGTTGATAGAATCATAATGTGTAGTAGCAC CTCTTTGGCCTTCTTCATGAGGAATGAACATTGTGGCCCTTGCAAGGATTTCCATGTTTCATACATAATCTTATCTTAAT TTGTTTTTCCTTGATAACATCATTAGAATTCCTTACATATTCTTGTACAAGCCTCAATATTATATCCACATTCATTATCT ATAATTAAGGGTTGCTCTCTGTGTGGATATTGGTCGAATTTTTTTATTCACATTGGCTTCAGTTAATGGTAACTTCTCTT TAATTTTACAGGAACTTGAGTTCTAATTCCTTGGAGGGTGAAATACCTTTAGGACTAGGTCAAAAATCCCTGCTACAAGT GTAAGATCATAAATCATCTCTGTTTGTTACAGTTCCTTGCAGAGTTGTGGTGTTTTTAGATGTTATGCAAATGCTTTACA TTACTCAACTGAATGAACTTTTCATTTTATTTGGTCATCAGATTCTCGTATCTTTACTCGTTTAAAAGTCACATTTATTT GGTATATATTCAGTCTGTATCTTTTTTTCTTGCATATTTACTCGATATTCTATTTATTTTTCTTATTACCGCTTTCTGTA GGGATTTGTCCAACAATCAGTTAACGGGCCCCATACCAGACAGCTTAGCATCTTCGAGTTTAAAACTGGTGTAAGTCTGT AAGCATTCATTTTATCAATGTCAATATATCCTGTTTCTGGTTTTCTGGTCTCGCTTCTATAGCTTTATTTCCTTGATGTT TAGGATTTAAATGAATCAAATAGTAAATAAAACTTCTAGTACACTGTTAAATGGCTTCTGTCCCTTTTATTCTCCAACCA AATTATACTTTAGTCAGTTTTTCTAATCCATTTTATCATGCCAGGCTATTGAATGGTAACTTATTGGAAGGACAAGTGCC AGAGCAACTTTATTCAGTTGGGGTGCATGGTGGAGCTATTGAGTATGTCACTTTAATCTTCTAGCTATACTCTATCTAGT TTGCATAATGTTGTGTTCGAATTCAAATGTTAGATAACTAACTTAGCTTGCGTGTATCATTCTCCCTATTTGGCGTACTA CTGTTTTTGTCTCTCTTTCTCTCTGTCAATGTGTTTGCACCTAACATAATCTAGAATACCAGACCAATCTAGGCTCATGG TGTCAACCCTCTGTCAGCGTTGAAAACCGTGAGTAGAAGCGGGGAGAATGACGAAGAGGGAGGAAGAGAGAGTTCATAAG ATTTCTTATTCCCTCGTAAAAGCTACTCCTCCTCGTAGCTTTCCTTAAAATCACTTGTCCCTCCAATGTGGAAAATTACT GTGTTTCCAAACACTCTAAGCACCAACTTTTACTACAATCACACACACTAAAAGCATCATATCCAACTTAATAACAACCA AACTAACTGAACAACATGCTAACTTACTAACTACTAGGTGAAACTAAATCTGCTGTTTGTTGTGTATGGTCATCCAAGTT GCATAATTCTTGTAAGCTGATGTAAAATTGATGTGCAAAATCTCTTCCCTTTTAACACGTCCTTAATCCTTAATCTCTCC CATTCATGGTTGCGACATGTTGTCTTTATTTGTTTCACTGGAAAATATACTTTCAAAGGGGGCATGAAATGGATGTTCCA GCCAAGATTTTGTCTATCTGAGTAATTAAACAACATTAGTTGCTATCTGACTTTGGAAATTATCTCTTTTCTATGTTCAT TTGATTTGTTTTCATTCAGCCTCTCTGGCAACAAGGGTTTGTGCGGCGTCCCATCTCTGCCATCATGTCCTATGTTCTGG GAACACGGTGGATTATCAACTGGGGGGAAAATAGCAATAAGCTTGTCATGTCTTTTTGTATTCTTTGTGGTACTGCTGCT GGGATATATCTACATCAGAAGGAAAAGGAATGATTATGACTTTGGTCTACCCCATGAATTAATGGGTAAGTATGACTTCA ATGAGATTATACTTTTTTGTTGATAATTTTTGTTTATAATATTGCTGGAAAATGGCAATATGTCTTAGATTTATTTTCCC GGGCTAAATTTAGTCTCTTGATGTGTTTTATTTTGCAGTAGTTGTTATTATCTGTTACTATATACACACAGGATATGATT CTTGTGAAATATTTATATTTGTTTTCCTTGAACTGACTAAGGAATTTCCCTGGGCAAGAAGAATGGAGACATTCTTCATA AATCTAATTTTACTTGGGCATTCATGTGTACTATTCTAGTCTTAAGTCTTAACCATATGTTCCATTATTTGCTGAAGGTG GAAAAATGACCTTTTTGTACATGGACATGCATCATAGGAGTTTGTAAACTTGGAATAAAAATTTAAGTCTGTACCATACT GCCATATATCTAATTATTCTTTTGTTCTACGAATAACTTCAATTTTGCATCTCAAGCTAATCAATCCTTCTTTTAGTGAC CTTGTACATAGCAACTGCCATGATTTGTGTGATCTTTCATTAAGAAAAGGAAGCATAATTTGAGCTGTTTAAATTCCAGC AAATGACAAAACATATTTTGTTTTTATTGAATTCTGTTTGGATTGAGAAATTATGTATATATACTTTGGATATTTCAATC CTTATGCTAATTGTAAACTACTTCATGGCTTCTTTTGCAGCATTAGCGGCCAAGAGAAACAAATATCAGAGGCAGAAATC ATTGATGCTTCTAGAGCTGGAGAGTCAACATGCCAGGGGATTACCTTCACCTTTTACTCCACAATAAATTTTCATGGAAT TGGAAGAGATTGATTCCCATAGTTTTCCGCTGAACATACACCGTTACCGCATAGAGAAAGTAATTGAATGTTACAAGCTT TGCTACAACAATGGCTTCTGGGGTTGCTTTTCTAACACAATCCACAATAATCTCCTATTTCACAATACAAATGGCATATC CCAGCTACAAAACTAAGCCATCTGTAATGTATATATCTTTGGATGAATATTCACCTGATAGGATCATCATCAACTCATGA TGTATACAATTTGAGCCACTAGCTAGTAGCCAGTTTTTCATGTGTCTTCAATTCTGCTTTGATTCTTAACACTGTATAGT GATTTATGTAGCCAAATAACAGTGAGTGAGTTTATTGTACAATGTATGATTGAAGGTTTTCCTTACAACTATACCAAATT ACAAGTAAAGCAAGATAGTGAAAATTCCCCACTTCAATTTTCTGTAACTTTTAATTTACCATCCATATGCACTGTCAATT TTCTTGTGCCTGCCACAGTGGCAA
CDS sequence (LotjaGi5g1v0267700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTCCACTATCCTTCTCCCCATTCTCCTTCCTCTCATTTTCCCTCTTCTTCTTCACAGCTTCCTCTTTCTCTTACCA CATTAACTGCGGCACTTCAACAAACACCTCAGACGCATTCAACACAACCTGGCTCTCCGACCGCTTCTCCACCGCCGGCA CCACCGCAATCGTCTCCGAGCCTCTCCGCTTCCACCGCCCCTCCGAGAAAACCCTCCGCTTCTTCCCTCCTTCCTCCTCC GGCAAGAAAAACTGCTACTCCTTCCCTTCCTCAACATTCCCCGCCGGCAGATACCTCCTCCGCACCTTCACCGTCTACGA CAACTACGACGCCAAGTCCCGTCCTCCCTCCTTCGACGTCGCCCTCGACTCCACCATCCTCTTCAGCTGGCGCTCTCCAT GGCCTGAATCAACCTCCCGCGACGGCGCCTACTCTGATTTCTTCGCTTTCCTCAACACCTCCTCCGCCGCCGACCTCTGC TTCTACGGCTACGCCACCGACGCTCCGATTGTTTCCTCTGTTGAGCTCTTCCAGGTCGACGCTACCTCCTACGACTCCAA CTCCACCGGTGATAACCTCATCCTGGTCAACTACGGCAGAATCTCCTGCGGCTCCGGCGACCACTGGGGGCCTGGTTTCA CCAACCACTCCGATCGCTTCGGCCGGTCATGGCAGCCGGACTTGACCTTCCGGGCCAGACCCACCGCTGTCGTCCGGGTG GTTTCGACGGAGAATGCAGTGACCGGAGCCGAGACTGGGCCGAATTATTTTCCGATGAGGCTGTACCAGATGGCGGTGAC GGTGGAGGAGGGGGTGTTGGAGTACGAGTTGGGTGTGGACGCGAAGATGGACTACATGGTGTGGCTGCATTTTGCGGAGA TTGATTCCACTGTGAAGAAAGCAGGGGAGAGGGTTTTTGATGTGTTCATCAATGGTGACAATGTGAGCAGGGTTGATATA TTCAAGGAAGTGGGTGGCTTCTCTGCGTTCACTTGGCATCATGTTGTTAAGAATTTGAGCTCTAATGTGTTGGGTCTCAA GCTTGTGGCTTCTGTTGGTGCCCCTCTGATCAGTGGCATTGAGAATTATGCATTGGTTCCTAATGATCCTTCCACTCTCC CTCTTCAAGTGAGTGCCATGAAGGCGTTGAAGGAATCGCTTCGTGTTCCGGATAGAATGGGTTGGAATGGTGATCCTTGT GCACCTACTTCTTGGGATGCTTGGGAGGGTGTTACTTGCCGCATGAGTAACAACAAAACTGCTCTCATCATAACTGAAAT AGATCTTGGTAGTCAAGGACTGAAAGGATACATAAGTGACCAGATTAGTCTTTTGTCAGACTTAGTAAGCCTGAACTTGA GTTCTAATTCCTTGGAGGGTGAAATACCTTTAGGACTAGGTCAAAAATCCCTGCTACAAGTGGATTTGTCCAACAATCAG TTAACGGGCCCCATACCAGACAGCTTAGCATCTTCGAGTTTAAAACTGGTGCTATTGAATGGTAACTTATTGGAAGGACA AGTGCCAGAGCAACTTTATTCAGTTGGGGTGCATGGTGGAGCTATTGACCTCTCTGGCAACAAGGGTTTGTGCGGCGTCC CATCTCTGCCATCATGTCCTATGTTCTGGGAACACGGTGGATTATCAACTGGGGGGAAAATAGCAATAAGCTTGTCATGT CTTTTTGTATTCTTTGTGGTACTGCTGCTGGGATATATCTACATCAGAAGGAAAAGGAATGATTATGACTTTGGTCTACC CCATGAATTAATGGCATTAGCGGCCAAGAGAAACAAATATCAGAGGCAGAAATCATTGATGCTTCTAGAGCTGGAGAGTC AACATGCCAGGGGATTACCTTCACCTTTTACTCCACAATAA
Protein sequence (LotjaGi5g1v0267700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIPLSFSPFSFLSFSLFFFTASSFSYHINCGTSTNTSDAFNTTWLSDRFSTAGTTAIVSEPLRFHRPSEKTLRFFPPSSS GKKNCYSFPSSTFPAGRYLLRTFTVYDNYDAKSRPPSFDVALDSTILFSWRSPWPESTSRDGAYSDFFAFLNTSSAADLC FYGYATDAPIVSSVELFQVDATSYDSNSTGDNLILVNYGRISCGSGDHWGPGFTNHSDRFGRSWQPDLTFRARPTAVVRV VSTENAVTGAETGPNYFPMRLYQMAVTVEEGVLEYELGVDAKMDYMVWLHFAEIDSTVKKAGERVFDVFINGDNVSRVDI FKEVGGFSAFTWHHVVKNLSSNVLGLKLVASVGAPLISGIENYALVPNDPSTLPLQVSAMKALKESLRVPDRMGWNGDPC APTSWDAWEGVTCRMSNNKTALIITEIDLGSQGLKGYISDQISLLSDLVSLNLSSNSLEGEIPLGLGQKSLLQVDLSNNQ LTGPIPDSLASSSLKLVLLNGNLLEGQVPEQLYSVGVHGGAIDLSGNKGLCGVPSLPSCPMFWEHGGLSTGGKIAISLSC LFVFFVVLLLGYIYIRRKRNDYDFGLPHELMALAAKRNKYQRQKSLMLLELESQHARGLPSPFTPQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 23 | 23 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 27 | 27 | - | – | |
| Phobius | 9 | 20 | 12 | - | – | |
| PANTHER | 21 | 626 | 606 | 0.0 | – | |
| Phobius | 21 | 25 | 5 | - | – | |
| PANTHER | 21 | 626 | 606 | 0.0 | – | |
| Phobius | 26 | 553 | 528 | - | – | |
| Pfam | 28 | 364 | 337 | 1.8E-60 | ||
| Gene3D | 210 | 359 | 150 | 2.6E-13 | – | |
| SUPERFAMILY | 376 | 514 | 139 | 8.32E-16 | – | |
| Gene3D | 376 | 542 | 167 | 3.8E-25 | ||
| Phobius | 554 | 575 | 22 | - | – | |
| TMHMM | 554 | 576 | 23 | - | – | |
| Phobius | 576 | 626 | 51 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0267700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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