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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0271700 |
| Transcript ID | LotjaGi5g1v0271700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pumilio, putative; TAIR: AT3G10360.1 pumilio 4; Swiss-Prot: sp|Q9SS47|PUM4_ARATH Pumilio homolog 4; TrEMBL-Plants: tr|I1NHH7|I1NHH7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0271700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:58535619..58542647) extracted from Lotus japonicus Gifu genome v1.2.
TCTCTCTGCAAAATCCTTTATTTCTCAGAATTCATCTTTTTCTCCGAACCATTTTCAGCATTCAGCTTCATCAATACGGT AGGTTCTTCTTCTTTTGCTCTTTTGTTCATTGAAATCTCTGCAAGTTTTTTTTTTCTTCTTTTCTTTAACGAAATCTCTT GGTTTTTTTAACGTTAATTTTTGTGAAATGTGCGAAATTTATGTATTGATTTGCGTGTTATTTGTTGGTAAAAGGTTGTC GTGTTCTTTCTCGATAATGGGTTTCTCTACCTTGATTTCAGAGAGGATCGGATTCTGGGTTTCGTTTGTATAGATGTGAA GGTTCCTTTCCTTTTGAGCTGTGGAGTCTAAGGTATGATCGTTTTTCTGTTGCAATTGATTATCTTTTTCTGTTGATTTA TAGTCTTTTCTGTGGTAAGATAAAGAAGAATGAGAAGGTTAGAGGTTGTGTTTGATGTAATTCTGAGCCCTTTGTGCCTC TAATTTAAGTTTGTTCTAGGTGGGTTTTTACTGTTTGAGGATATAGTGAAAGAGAAGGAACCATGACCATTGTTTTCTTA TGTTTTGTTTGGTTTTTTATGATTTCATGTAAGGAGAAAGTGGATTACGGTGTATGATTTTTTTTCCTCTTTAGTTTTTG GGTTTGTTATCTGTGTAATTTGGATGGAATTCTTTTGGTGGCATTATTAGGTGACTTCTAGTTTGGAGTTGGAGATGGCG AGTGGGAGTAAGGTGGGTGTGCAAACTTTGGATGAAGGTTTGCAGCCTTTGCCGAATGGGAATATTGAAGACACCTTGCA GAGTGAGCTAGAAAGGATATTGCAAGAGCAGCGCAATCAGCAATTTATCAATCAAGAAAGGGATGTCAATGTTTACAGGA GTGGAAGTGCTCCTCCAACAGTGGAAGGATCTTTAAGAGCTTTTGGTAGTCTGAGGGACTCCGATTTTGGGGTGGTCAAT AGTGGGAGAAATGATAATGATGGGTTTTTGACTGAAGATGAGCTTAGATCTCATCCTGCCTATCTTTCCTATTATTATTC ACATGAGAGCATAAATCCTAGATTACCGCCCCCGTTGTTGTCAAAAGAAGATTGGCGTGTTGCGCAAAGGTTTCAAGCTG GCGGCGGGTCTTCTTCAATTGAGGGATTTGGGGACTGGAGGAAGAATGTGGCCACAAATGGTGATAGTTCATCGCTATTT TCAATGCAGCCAGGATATTCTGTGCAGCAGGCAGAGAATGATTTGATGGAGCTGAGAAAAGCCAGCGGACGGAATCTCTC TAGGCAGAGTTCAACTCAGTTGGTTGACAGACATATGGATGGTTTGGCAAGAATGTCAGGGGCTGATCTTGGTGCTAGGA GGGCCTGTTTTTCTGACATTCTTCAGGTAATTAACTTATCCTGATTGCATGTGTCATGGTCTTGATTCCATCCTTATCCT TCAATCTCCAACATTAACCATAAGCATCCAATTATAATAATAATAATAAACTTAACTGACAAAGTATGTTGCACTATTTT CTTACCCTGATTACTGAAGCTAGCATTTTAGCAGGAAGGACTTGATCAACCTGCTTCATTGTCAAGCAATATGTCACGTC CAGCAAGTCTCAACGCATTTGGTGATATCATGGATTCAAATAGCATTATTGATCATGAATCCTTGGAGGGCTTGCGTTCT TCAGCTTCTACCCCTGGTTTGGTCGGACTTCAGAATCACAGTGTAAATGTTTCTCGTAATTTTGCATCTACTGTGGGTTC TTCTGTGTCAAGAGTGATGACTCCTGAACCACAGGTTTTTGGGAGATCTGTTGGATCTGCAGTTCCCCAAATGGGTAGTA AAGTTTTCTCTGGTGAGAAAAATGGCATTGGCTTGGGTACCCAGAATGGCTACTCTTCCAATATGCCTGATCTTACTCGT ATGGTGTCTTCTTTATCGAGGTTAAATTTATCAGGTGCTAACCTTGCAGAGCAAGATATTCTTTTAAAATCTAAGCTGCA AATGCCTGATGTTCTGTTAAGCACACCGAGCAATGTTAATTTGACCGGACATAATGAGATCTTAAGAGGAATGAACTCAT TTAGTTCAAACGAGCGAGTCAATTTGATGAGAAAATCTGCTTCTTATTCTAATCTTCGCTCAAAAGTTTCTTCTACTGGA AATTTATCTAGTTTGTCAAGCACAGACTTCACTGGCCATGTTCCTGGCGCATATCTCGGAAACTCAAAATTGAATACTGT GTATGATAATCATCTTGAGACAGGTCTCATTTCTCTCTTGCTGACTCCTCTGCTTGAAAGTGTGTTTTTTGTGTCAATTA TTTAACTCAGTGAGGTTTAGCCTTATTTGTAGATCTAACAGTTCAGTTTTTAATTCCAGCTTTGAGGGGTCGCAGAGATG GTCAAAGTTTGGATGCTCTACGAAATCAACTTGCTAATGAATTTCATTCGACAACCCTGGACCCACGCTTCATCCAATCC TTGCAGCAAAGTTCTGATTACCGGCAAGGGATGAGCAGTTCTGGTGATCCTTTTCAGATAAGAAATTTCACGGATACTTC ACATGGAGACTTAGAGGGACTTCAGAAAGCATATCTTGAGACACTTCTTGCTCAACAAAAGCAGCAGTATGAACTCCCAC TTCTGAGCAAATCTGTGCTTCTTAATAATGGGTTCTTTGGGAGTCAGCCATATGGTCTTGGCATGCCATATTCAGGAAAG CAGACTGCAAATTCCTCACTTCCTTCTCTTGGATCTGGGAATCCACTGTTTGACAATGAACGTATGTCACAGTTAACTTC TATGATGAGAAGTTCAATGGGAGGTTCTGGCAGCTCATGGCATGCTGATATTGGCAATAACATGGAGGCAAGATTTGCTT CATCCTTACTGGATGAGTTCAAGAACAATAAGGCCAGGCCTTTTGAACTTCCAGATATCGTTGACCATGTGGTTCAATTC AGGTACGAATCTTACACCTCCACAGTTGTTTCTATTGACATGGCTCTGGGAATCTGATTTGATAATCTGTGCCATAATGC AGCACGGATCAATATGGTAGCCGATTCATTCAGCAGAAATTAGAAACAGCTTCTGTAGAAGAGAAGACCAAGATATTTCC TGAGATCATTCCTCATGCTCGTGCCTTGATGACTGATGTCTTTGGCAATTATGTTATACAGAAAGTACAATTAGTTTCTG CTTCTGAGTACTGTTGTAAATATGTTCTTTTTATTTTGTTAGCGATAGTAGAGTTTCATGCTTGACATTGAACTTTTGCA GTTTTTTGAGCATGGTACAGAAAGTCAGAGAAAGGAGTTAGCCAGCCAACTTGCAGGTCATGTTTTACCTCTTAGTCTGC AAATGTATGGTTGCAGAGTGATTCAGAAGGTGCCTTTTCAAGCCTTATATTCTCATATTATTCCCTGTACACGGGCATCA ACCCATGCATGACTCTTAAAATCTCATTTCTTCAATATCGCATAATACGGTATTTTTTAAAATGATGTAAACTTGCTTAA ATATTTAGTAAATAATGGAACACTTGAGATATTCTTGTGTATTACTCTCTACTTTCTGCAGTACTGAAATTTGTTGGTTT TATTTCATATTGTGATTTTTCACCATACTTAAGTTATAAGGTTTAATCATCCATAGGTTTAGTCATTTGGATTTAAACAT GAATTGGTTTAGTTCAAATTTGGTTTATATTGAATATTGATAAATACTTATTGCCACAAGGTTAAATTTCAAATGAACTG AACCCCCAACCCAACCCAACCCAACCCAAAAAAAGTCTCTATTATTTGTTTTTAGATTAGGAAAGAAATGAATGCATTAT TTAAAATTTTTGCTAAATTTATTGACAGGCCTTGGAGGTGGTTGATGTGGATCAGCAAAGTCAAATGGTGTCAGAGCTCA GTGGTGCAGTAATGAAATGTGTACGTGATCAAAATGGAAACCATGTTATTCAGAAGTGTATAGAGTGTGTCCCTCAAGAT AAAATTCAGTTTATTGTCTCATCTTTCTATGGGCAAGTTGTTGCACTTTCTACTCATCCTTATGGATGCAGAGTTATTCA GGTTAGACCATTGGACATGGTATTCATCTTCTGCTGAGGCAGTATGAACTTTATTTCTTTTAGCATTTTATTTAAGTATT AACGGTTTTCATGGATGCTAACAGAGGGTTCTAGAACATTGTGATGATCTAAATACACAACAAATTATCATGGATGAAAT CATGCAATCTGTCTGCACTTTAGCACAGGACCAATATGGAAATTATGTTATTCAGGTATGCTACGTTCCGTACATTAACT TGTTTTATATAGATGATAGAAAACACACATCAGCATGGAGATGCATGCGTCATGCTTCGGCACTACTGTACCTATAAGTT ATACGTGCACTTATAAATATGCATTATAGTTTTGTGATTGACTTTGATTGTGTCTATTATTTTAGAAGAGAGCAAAGTTC ATGTTTGTATTGACAAACAACTTTTTCTACCCGTCTTGGTTTTAGTCTCAGGCTTTTAGCTGTTTGTGGGTCATCCTCTG TAAGTTTGAAATACAGAAGTCTGAAGCAGTGATCTTCTAACAGAATTGGTGGACATGTTTCTTTACTGATGACCAGAAAA CATCGATTTAGACTTGTGTCCATTGTTTATACTCTCTTCTTAGGATCATATTGATTCATCATTCATGTCGAGAAGCACCA TACCTTGGGCATTTTCATATTTCCCTAAATTAAATTAATCGACAGTAGACACTTTTAAGTAAGTTAACAATTAAACATAT TCAGCGACTTGCAACTTCGATTCAATTTCATATTTTCCGGGTCAATATATAGAGGTTTATTTATTAAATGATATACCAGT ATTATGATCTTGGCCATTGTTTACATGCTTATACTTTTAATCATAATTTGGTTAAGTTTTTGGTTTCATCTTCATGATCT TTAGCTGCAATTAACAGATTGGATTTTCCAATTTTTGAGATGGTTTATTTTTTTTATTTTGTCAGTTATCACTGTGGTAT GCAAACTTGTTTTCCCTTTTTTAATAATAAATAAATGCATAAATATATCTATTTGAGTGCTGGATCATAGTATATCTTAT CTATATTCTGTTCTGTTTATTGTTTGCTAGTTCCATTATTACTTACATACCACACTTTTTTCTTTGTAGCATATCCTAGA ACATGGTAAACCACATGAACGAGCTGCTATTATCAGCCAGCTAGCTGGGCAAATTGTAAAGATGAGCCAGCAAAAATTTG CTTCTAATGTTATCGAGAAGTGCTTGGCTTTTGGTAGTCCTGATGAACGTCAGCTATTGGTGAATGAAATGCTTGGTACT TCTGATGAGAATGAGCCCTTACAGGTAGGTCCCCCTTTCATCTCTTATCGTTTGAAATATTAGTTTTACTGAGGCTGGAG ACTATCGACTATTCAAATATATGCCTGTCACTTAATTTATTATCAGCCTAGGGGATTAGGTTGTAACTTGAATTCAAGAA TCTGTCATGTGTGAACTTCCCTTTCCTAAATGTTTTCCAAATAAAAGAAAATAAATAAGTTCATTAACTTAAATATGGAA AATTAAGTCAATGTTAATGTTTTTTCTTCTATATATTTCATATACCTATGCCTTAGGCACTTGATTTTTTAATTATTTAT CCCCTAAAGTTTAATTCATTTATTTTACTCGTATTACTTTTAGATTTAAGTGGACACTGAACGATTACACTTTCTGACCT AGTTGCATATCAATACTCAGTAGTGGTAGAAGGGTGGACCAAACCTTGTCGTTAATCCAATGAGGTCTTAGGTCTCTGAT TCTGGGAGTTTGCTCCATAAATTATCATGGGCTGGAGTGAAAGAAGGGGATGGACCAATCCTTATAAGGGGATGGACGAT TCTTATAATAATAAATTACGAAAATTGGCAAAATAAATTATTTCAGCTTTATTACCATCACTAATTGCCAATTGGTTGGA GTGAAAGAAGATTGGATCCTTAAGCATCACCATTGGATCCATACATCCATTTTCTTCATGTTTGGTGATGGACTTAACCA TGTTTTAAATGGATCCCGTTATTTCTGATAAAAGTTCATCAATTTTCATTGTTGCTTTGTACATTTAATTAATTATAGAA TGAATGATCATATAACATGCAATTCACAGGCTATGATGAAGGACCCTTTTGGAAATTATGTTGTGCAAAAGGTTCTTGAG ACCTGCGATGATCAGAGCCTTGAGCTGATCCTTTCTCGCATCAAGGTTCACTTAAATGCCCTGAAGCGGTACACCTATGG CAAACATATAGTTACTCGTGTGGAGAAGCTCATAACCGCTGGAGGTAAAGAATGCAGAGACTTTTTCCATTATAAATTTC GATTGCTTTTCTGTAAATTGTTTAGATTTCTCATAAGCCCCTCATTCTCGCAGAAAGGCGCATAGGATTGTTGGCCTAAT TTACTGTATCTTCTGTCATCCTATTGAGGTCTCATCCTCCTGGCCCGCCGCATAGAGGTTTTGCTTTTGTACAGCTAACA TGAATGTTAATATCACCAACTTTCCTCTGCTAGCCTCATCTGTATAAAGCATTGGAGATAAACAGATTCAACTGGGCTAC TGGAATAATATTTTTCTTTGCTCTGCTTGATTTTGTTGTTGCAACTCGACAGAGAACCTCCATAGGGAGAGTTACTTAGG ATGCTAAGATTAGGGTCGCGGCAATGTGTACTGAATGTGTATGTATGAGGTCCATTGTCTGTAAAGAAAATAATAGCAAA TGATTGCAGTAACCAGAGCTATTAGTCAGGCTCTAAACTTGAATTTTATGAATGTAAATAATATGCTGCAACTTTCTTGG GCTGATCTGATCACTTTGATTCCATGTCATGTATCTAAGTTCACTTCTCTTTGCTCCAGAATTGATGGCAATTGGGAAGA AGTTACTAGAAATAATCACCCCAAAGAGAAGTATTTTGTGCTTGCATGAGTATATATTACTTCTACCCT
CDS sequence (LotjaGi5g1v0271700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAGTGGGAGTAAGGTGGGTGTGCAAACTTTGGATGAAGGTTTGCAGCCTTTGCCGAATGGGAATATTGAAGACAC CTTGCAGAGTGAGCTAGAAAGGATATTGCAAGAGCAGCGCAATCAGCAATTTATCAATCAAGAAAGGGATGTCAATGTTT ACAGGAGTGGAAGTGCTCCTCCAACAGTGGAAGGATCTTTAAGAGCTTTTGGTAGTCTGAGGGACTCCGATTTTGGGGTG GTCAATAGTGGGAGAAATGATAATGATGGGTTTTTGACTGAAGATGAGCTTAGATCTCATCCTGCCTATCTTTCCTATTA TTATTCACATGAGAGCATAAATCCTAGATTACCGCCCCCGTTGTTGTCAAAAGAAGATTGGCGTGTTGCGCAAAGGTTTC AAGCTGGCGGCGGGTCTTCTTCAATTGAGGGATTTGGGGACTGGAGGAAGAATGTGGCCACAAATGGTGATAGTTCATCG CTATTTTCAATGCAGCCAGGATATTCTGTGCAGCAGGCAGAGAATGATTTGATGGAGCTGAGAAAAGCCAGCGGACGGAA TCTCTCTAGGCAGAGTTCAACTCAGTTGGTTGACAGACATATGGATGGTTTGGCAAGAATGTCAGGGGCTGATCTTGGTG CTAGGAGGGCCTGTTTTTCTGACATTCTTCAGGAAGGACTTGATCAACCTGCTTCATTGTCAAGCAATATGTCACGTCCA GCAAGTCTCAACGCATTTGGTGATATCATGGATTCAAATAGCATTATTGATCATGAATCCTTGGAGGGCTTGCGTTCTTC AGCTTCTACCCCTGGTTTGGTCGGACTTCAGAATCACAGTGTAAATGTTTCTCGTAATTTTGCATCTACTGTGGGTTCTT CTGTGTCAAGAGTGATGACTCCTGAACCACAGGTTTTTGGGAGATCTGTTGGATCTGCAGTTCCCCAAATGGGTAGTAAA GTTTTCTCTGGTGAGAAAAATGGCATTGGCTTGGGTACCCAGAATGGCTACTCTTCCAATATGCCTGATCTTACTCGTAT GGTGTCTTCTTTATCGAGGTTAAATTTATCAGGTGCTAACCTTGCAGAGCAAGATATTCTTTTAAAATCTAAGCTGCAAA TGCCTGATGTTCTGTTAAGCACACCGAGCAATGTTAATTTGACCGGACATAATGAGATCTTAAGAGGAATGAACTCATTT AGTTCAAACGAGCGAGTCAATTTGATGAGAAAATCTGCTTCTTATTCTAATCTTCGCTCAAAAGTTTCTTCTACTGGAAA TTTATCTAGTTTGTCAAGCACAGACTTCACTGGCCATGTTCCTGGCGCATATCTCGGAAACTCAAAATTGAATACTGTGT ATGATAATCATCTTGAGACAGCTTTGAGGGGTCGCAGAGATGGTCAAAGTTTGGATGCTCTACGAAATCAACTTGCTAAT GAATTTCATTCGACAACCCTGGACCCACGCTTCATCCAATCCTTGCAGCAAAGTTCTGATTACCGGCAAGGGATGAGCAG TTCTGGTGATCCTTTTCAGATAAGAAATTTCACGGATACTTCACATGGAGACTTAGAGGGACTTCAGAAAGCATATCTTG AGACACTTCTTGCTCAACAAAAGCAGCAGTATGAACTCCCACTTCTGAGCAAATCTGTGCTTCTTAATAATGGGTTCTTT GGGAGTCAGCCATATGGTCTTGGCATGCCATATTCAGGAAAGCAGACTGCAAATTCCTCACTTCCTTCTCTTGGATCTGG GAATCCACTGTTTGACAATGAACGTATGTCACAGTTAACTTCTATGATGAGAAGTTCAATGGGAGGTTCTGGCAGCTCAT GGCATGCTGATATTGGCAATAACATGGAGGCAAGATTTGCTTCATCCTTACTGGATGAGTTCAAGAACAATAAGGCCAGG CCTTTTGAACTTCCAGATATCGTTGACCATGTGGTTCAATTCAGCACGGATCAATATGGTAGCCGATTCATTCAGCAGAA ATTAGAAACAGCTTCTGTAGAAGAGAAGACCAAGATATTTCCTGAGATCATTCCTCATGCTCGTGCCTTGATGACTGATG TCTTTGGCAATTATGTTATACAGAAATTTTTTGAGCATGGTACAGAAAGTCAGAGAAAGGAGTTAGCCAGCCAACTTGCA GGTCATGTTTTACCTCTTAGTCTGCAAATGTATGGTTGCAGAGTGATTCAGAAGGCCTTGGAGGTGGTTGATGTGGATCA GCAAAGTCAAATGGTGTCAGAGCTCAGTGGTGCAGTAATGAAATGTGTACGTGATCAAAATGGAAACCATGTTATTCAGA AGTGTATAGAGTGTGTCCCTCAAGATAAAATTCAGTTTATTGTCTCATCTTTCTATGGGCAAGTTGTTGCACTTTCTACT CATCCTTATGGATGCAGAGTTATTCAGAGGGTTCTAGAACATTGTGATGATCTAAATACACAACAAATTATCATGGATGA AATCATGCAATCTGTCTGCACTTTAGCACAGGACCAATATGGAAATTATGTTATTCAGCATATCCTAGAACATGGTAAAC CACATGAACGAGCTGCTATTATCAGCCAGCTAGCTGGGCAAATTGTAAAGATGAGCCAGCAAAAATTTGCTTCTAATGTT ATCGAGAAGTGCTTGGCTTTTGGTAGTCCTGATGAACGTCAGCTATTGGTGAATGAAATGCTTGGTACTTCTGATGAGAA TGAGCCCTTACAGGCTATGATGAAGGACCCTTTTGGAAATTATGTTGTGCAAAAGGTTCTTGAGACCTGCGATGATCAGA GCCTTGAGCTGATCCTTTCTCGCATCAAGGTTCACTTAAATGCCCTGAAGCGGTACACCTATGGCAAACATATAGTTACT CGTGTGGAGAAGCTCATAACCGCTGGAGAAAGGCGCATAGGATTGTTGGCCTAA
Protein sequence (LotjaGi5g1v0271700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASGSKVGVQTLDEGLQPLPNGNIEDTLQSELERILQEQRNQQFINQERDVNVYRSGSAPPTVEGSLRAFGSLRDSDFGV VNSGRNDNDGFLTEDELRSHPAYLSYYYSHESINPRLPPPLLSKEDWRVAQRFQAGGGSSSIEGFGDWRKNVATNGDSSS LFSMQPGYSVQQAENDLMELRKASGRNLSRQSSTQLVDRHMDGLARMSGADLGARRACFSDILQEGLDQPASLSSNMSRP ASLNAFGDIMDSNSIIDHESLEGLRSSASTPGLVGLQNHSVNVSRNFASTVGSSVSRVMTPEPQVFGRSVGSAVPQMGSK VFSGEKNGIGLGTQNGYSSNMPDLTRMVSSLSRLNLSGANLAEQDILLKSKLQMPDVLLSTPSNVNLTGHNEILRGMNSF SSNERVNLMRKSASYSNLRSKVSSTGNLSSLSSTDFTGHVPGAYLGNSKLNTVYDNHLETALRGRRDGQSLDALRNQLAN EFHSTTLDPRFIQSLQQSSDYRQGMSSSGDPFQIRNFTDTSHGDLEGLQKAYLETLLAQQKQQYELPLLSKSVLLNNGFF GSQPYGLGMPYSGKQTANSSLPSLGSGNPLFDNERMSQLTSMMRSSMGGSGSSWHADIGNNMEARFASSLLDEFKNNKAR PFELPDIVDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKFFEHGTESQRKELASQLA GHVLPLSLQMYGCRVIQKALEVVDVDQQSQMVSELSGAVMKCVRDQNGNHVIQKCIECVPQDKIQFIVSSFYGQVVALST HPYGCRVIQRVLEHCDDLNTQQIIMDEIMQSVCTLAQDQYGNYVIQHILEHGKPHERAAIISQLAGQIVKMSQQKFASNV IEKCLAFGSPDERQLLVNEMLGTSDENEPLQAMMKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVT RVEKLITAGERRIGLLA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 22 | 22 | - | – | |
| PANTHER | 37 | 374 | 338 | 0.0 | – | |
| PANTHER | 37 | 374 | 338 | 0.0 | – | |
| Pfam | 312 | 374 | 63 | 4.6E-5 | ||
| Pfam | 396 | 644 | 249 | 3.7E-76 | ||
| PANTHER | 397 | 973 | 577 | 0.0 | – | |
| PANTHER | 397 | 973 | 577 | 0.0 | – | |
| Gene3D | 626 | 971 | 346 | 1.8E-142 | ||
| ProSiteProfiles | 626 | 966 | 341 | 132.833 | ||
| SUPERFAMILY | 629 | 963 | 335 | 5.35E-119 | ||
| CDD | 642 | 962 | 321 | 1.54781E-171 | ||
| ProSiteProfiles | 646 | 681 | 36 | 11.16 | ||
| SMART | 646 | 681 | 36 | 5.5E-7 | ||
| Pfam | 647 | 680 | 34 | 8.1E-8 | ||
| ProSiteProfiles | 682 | 717 | 36 | 10.81 | ||
| SMART | 682 | 717 | 36 | 3.4E-9 | ||
| Pfam | 682 | 714 | 33 | 2.5E-8 | ||
| ProSiteProfiles | 718 | 753 | 36 | 11.09 | ||
| SMART | 718 | 753 | 36 | 1.1E-6 | ||
| Pfam | 720 | 751 | 32 | 3.1E-5 | ||
| ProSiteProfiles | 754 | 789 | 36 | 9.667 | ||
| SMART | 754 | 789 | 36 | 7.7E-7 | ||
| Pfam | 756 | 787 | 32 | 4.1E-6 | ||
| SMART | 790 | 825 | 36 | 3.0E-7 | ||
| ProSiteProfiles | 790 | 826 | 37 | 10.81 | ||
| Pfam | 791 | 824 | 34 | 2.7E-7 | ||
| ProSiteProfiles | 827 | 862 | 36 | 12.07 | ||
| SMART | 827 | 862 | 36 | 1.1E-6 | ||
| Pfam | 831 | 854 | 24 | 1.0E-7 | ||
| ProSiteProfiles | 863 | 898 | 36 | 9.994 | ||
| SMART | 863 | 898 | 36 | 1.3E-6 | ||
| Pfam | 865 | 896 | 32 | 1.2E-4 | ||
| ProSiteProfiles | 899 | 940 | 42 | 10.017 | ||
| SMART | 905 | 940 | 36 | 3.0E-5 | ||
| Pfam | 913 | 937 | 25 | 9.2E-6 | ||
| ProSiteProfiles | 941 | 977 | 37 | 4.744 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
Expression pattern of LotjaGi5g1v0271700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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