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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0281000 |
| Transcript ID | LotjaGi5g1v0281000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Multifunctional CCA protein; TAIR: AT1G22660.1 Polynucleotide adenylyltransferase family protein; Swiss-Prot: sp|Q9P4S5|CCA1_CANGA CCA tRNA nucleotidyltransferase, mitochondrial; TrEMBL-Plants: tr|I1NH95|I1NH95_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0281000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:59648989..59658911) extracted from Lotus japonicus Gifu genome v1.2.
CTGGCACTTATACTATTATGAGACTTGCTTTCAAAACTCTTCTTCTAGTGCCTCCTAAACCCAAACCCAATTCCTTCGCA CATACACCACGAACCCTTCTTCTTCAACCTCCCGCCAAAACCCTTGTTCTCCTACGAGCAGCCCCTACGCCGTCGTTTCG GTGCTCCGCTTGCGCACCAATGTCTACCCACCTGCACGTTCGCGACGGTATCGAACCCTCCCTCAAGGAGGAGGAAATCT TCGATCGCCTCCGCAAAACCCTCAGCCACTTCCACCTCGACACTCAGCTCCGAGTCGCCGGCGGCTGGGTTCGCGACAAG GTTTGCACTGCAGCACGAAAACCTCTGTCAGTTTAACTGCCTAGCCCTAATTCATTGTTTTTTTCATGTTTTGCAGCTTC TGGGGAAAGAATGCAAGGACATTGATATCGCTATTGACAATATGATGGGTACTGAGTTCGCGGATAAGGTTAGGGAGTAC TCCTTGTCCTTCGGCAAAGAAGAAGATGTAAAGGGAGTCCATGTTATTGAGAGGTATCTTTCACCCAGCGCTTGTGCAAG TGTTTGAGAGAGCTTATTGAAAACAGCTTATGACCTACCATAAGCTGTTTTGAGCTTATTTTCATAAGCTACCCAGAATA GCTTGATAGCTTATGAAAAAGAGCTCATGCTTATATATAACTTATTTTCAATTTATTTTAATAAAAATTTTAAAATAGCT TATGAATAAGCACTTATGGTCGCTTATGGTCATAAGCGCTTAATTAAGCTGTTTTCCCAAACGGGCCCCTAGTATATAGT TGAGCTCCTTAAGCATCTAGTCCAGGTTCGATCCCAAGGCGGGGTGAATGGAGGAACATTTGTGGGGCGAACCTACCCAC TTAACATGATCTCAGAGTGGCTTCCGGCTGTGGGAATACCTTGGGAAACAAAAAAAAATGTCATTTAGTGAAGAGTTTGG AACAACGAAGTAAATAAATGAAATAAAGCGATTCTTTTGATGATATTAGGATTTTATTTTTTTGGTGGTTGCTCTTGCAG CTATTAGGTTGGGTGATTTGGGGTCTCACTGTTAACTTCTACTCTCAAAGTTGTCTCCTTGTTTAGTGCGTTGAGGGCAT ACATACATTCCTTTTCTCATAACATTGCAACTGGAAATACATGCATTCAATTTTATGTTTTGGTTGCATTTTTTATCTTT TTCATAGAACATTATTTATATTTAATTATTATTTTTTCAGCAACCCTGACCAGTCCAAACATTTGGAAACAGCAAGGATG TCTCTGTTTGGTCAAGAGATTGATTTCGTTAACCTAAGGAGTGAAGAATACACTGAGAATAGCCGCATTCCTTCTAAGGT ATATAATTGTTCAGTCTTCTGGTTTAGTACTGGTGTACTCGTTATGCTGGACTAGCAAATTTGCTACTGGCTAAGAATTT ATTTTATTAGGTTTCCTTTTTCCTTTTTGGTCATATGAGATGCTTTGCTATTTTCCTTTAAGTAAGAACAACATGCATGT GTTCTCATTATTAATTTACATGCATAAAAAAGCAAAGTGATGAATATGTATTCTATCTTCCATTTGGAATAGCCCCCTTC CTACATCTCAGTATCTTACTCAAATTCTACATAATTAAGTTCACTTCATATCTAACAGCAATCATTTGGCACACCGGAAG AGGATGCATATAGGAGGGATTTGACAATTAACAGGTATTTTTCTGTACTTCTTTTATTTGTGTGTATGTGTGTGTGCATT ATTAGTTAAAACAAAAAAAAAATGTTTTTCTGTACTTATTGAGTGTGCTTAGCATTTCAAGTGTTTATGTGCATGGAATG ATACAATTAAGAAATACTCTGGTCAATTTCTCTTTATCTATATGTTAGTTTTAGGAAGATAAAGTTGAGACTTGAGATGT ACCTGTTGTGAAAAATATGGTAGAATCTCATCTTTGGTGATTTCAACACGTGTGGAGAAGACCCCTCGAAGTTCAAGTAA CAAATGAAGGGTAGTCCAATAGTTAGAGGTAAAGGGAAATCTGGTATAACTATAGGTCAAACCATTAAGAAGAATTTTTA TTTAAATAGTTTGTCTTTAGACATTATTTTTTATAGGACTTCATGACGTTATTTGATGCATATACCTGACCCTACCTACT AGGAAAATGCTTTTGTTATTCTTGATGCTAACTTGCTGGTTTGAGTATTCTCTACTATTCACCTGCTTTTGCACACATTT GTGGTGATAGTTTCACGAAACAATTTATTTGTGCTTGACAGCTTATTCTACAATATCAACACTAAATTAGTTGAAGATTT CACTAAGAGAGGTAAGAAAGGATCTTATTTCCCAAACAACGATTATTTGAAAGCTACTTGTTTCTCAGTCCAATCTCTTT GGCAATTTGCAGGGATTTCAGACCTTAAGTCTGGAAAGATAGTTACTCCTTTACCTCCAAAGTCCACATTTCTTGATGAC CCGTTACGAGTTCTTCGAGCCATTCGGTTTTGTATGTTTTAGTTTTTCATGATTCGTGTATCCTTTGAACCTTTTGTTCT ATTCCTTTTTTTGATGATTTGAACTTATTTTCCTGCTATATTGAAGATATAATTTTTTATTTAGGTGCTAGATTTGACTT TACTCTTGATGAAGATCTGAAAGTAGCTGCTGCATGTGATGATGTGAAAGATGCTCTAGCTGCTAAAATTAGCAGAGAGC GCATTGGAACAGAGGTATGCTCTAACTCTTCCATTCCTTCTGTAGACATAGAGCTTAGAATGATAAAATGCTATTGGGGC TTGGGGAAATTGCTCATACTATTTTTGTCTATACTGAAAATGTAGCCGTTTATGCTCTTACATTTATGTCATTGTTTGCA GATTGATCTTATGATATCTGGAAATCAACCTGTTAAAGCAATGACTTATATTTCTGAGCTGACAATATTTTGGATAGTAT TCAGTCTTCCTCCTGAGTCTGTACCTGCCATTCCAGATGGATGTGAAAGGTATTACGCTATCACTCACCCATAGATAAAT TCATAAACTGTTTCTTGGTGGGTTAAAATGAGCCGCATGATTGCAAATCCATTTATAAATAATACTCACATTCACATCTT CTGCAGTATAAGAGTTAGCTGGATAAGGTTGCTTCTTTGTTAGAAAACAAAAAGTAATTTGTGAACTGATAGCAATCATA GATATTTGTGATGAATTTCACATTTGAAACAGTATACCTTTTGATGTGTACAAATGCAATCACACAGACTGAAGGTTTAT CTTATTTTCTCTCCTTTTTTTGTCTGACAAGTTAAAATTATTGAAGCCTTCAATCATAGTTATCCATAGCGCGCAGTAGT GGTGCCATTGCACTGTTGTGCCGCGGCCCTGTGCTACTACGGAGGCTTCCATTGTGTTGCAGTTCACTATATCTGCGGAA AGTGCAGGCTTTCATGTGCTGTTGTACCGCAACTGCAGATGAAACCTGAAAACCCGAAAATTCAGAGTAAAAAAGGCGGT CAAAAGTTTTAAAAGCCTTCGAAGAGCTAGTCTGGCATGCACTCACTAATTGTCTCATGGTCCGAAGGTATCAAAAGTCT TTTGAGAAAACTATGGTTACCTTGCGACCCATTGTTCCTTCCGGCCAAGCCCTATGTATTCTGGCCAAACCCTTCTTTTT TCAGTCTGGCTCTATTCTTTTCTTCTTTGTGCTCTGTTCCTCTTTCTGAGTTTACAGTCACATGATTTGTTCTTTATGCC CCAGTCTCTGTTTTTCATCTTTCATATTCTGGTGCAATTTTTCTTTGTTATCTCAACTGTTCTACAAGTTTTAGGTCATG TCCTCTCACCTCTCCTTCATCCTTATCTTCTTCTGTCTCTTATTTTCTTAAGCTATTTTGCCTTTATTTTAAGGCTTAAA CTTACTAAAATCCTCACTTAGGTATTTGCCTTTGCAACATTTATATTTATGTAGTATAAATTATATAATATATATAAGAA CTTTCGATATAGTGGCCAGCCCACTATGCGCTATCCCGCTATAGTAGTTTTGGGGGTGGCCGCTATCCGGGATTGATAAC TATGCCTTCCATACAATATGGATATTTTTATTAAGCCAATATATAGTAACTTGATCAAGACCAAACCTTCTGAAGAGGAA AAAGATGAAAACCATAAATTTGGATGAGATGCATTCACGTGATTATACTTCAGAAGCATTGACCTGATTTGATACCCAGC ACTTGATCATTAGCTAAAGTTTCTAAAGGTCATGTTTTAACGCTAATATACAATAGTGTATAATGTAGCTAGATCAGAAA ATCGGATATAATTTAAAAATCTTGATTTCCATGTAGTCTGCGTCTTAGAGTGAAATTAACTTTAGTGAAGTTAAAACATG GCTTAGAGAGTAAAATGAAGTGCTGAAGACCAAAGAAACCTGTGGAATGTGGATATAAGACATTGTTTGGGCTGGCTTAT ATAAGATTGTACAGATCCTTATTTGATGATGACGGCTGAAGTTTCGAAGAAAATAGATATCTTATCTTGATTATGGAAGG CATCAAAGATGTTTGGAGTTTAGGATGGTAGTTTCATGGCCTGATATCATTACTCTGTGAAGATAAATATTAGGGTGGAT GAAATCAGTTCACAGACTTCAATTTCCTTGTCATTCTCTGACTAACCATGTTAAAGTTTAATTACGGTATATTAAACATT TCATTGGTGTCTTTGTGCATTTTTATAAATGAGAGTTTGATAATAGTTTTTGAAAAACCATTCTGAAATGTCTCTCTCTC TCCAAATTCAAATAGCTATGATTTTTCTGTACTAATAGTGTGAATGTCCAACCCCAATCATGCAAAATCATTCACCTATG TAGTTAGAATCATTGTCATCAAAATAGGGTGGACCGGCTGGAAGATGGGGAACCTTTTTAACCCTAGAAACCAATTTATC TCTGAACTGATGATAGAGAACATGTTGAATCAGCCGAGAATCTGGTGTTATTGACTATCGAGAGCCTCCTTTCTCATTTT TCTTCTGTCTTTACCTAACCCCTGTTATCATGCTTAGTATTTTATTTTGCTTATGACTATTCTCTTCTATGGAGATGTAG ATATTCTGTCGGTGATGCTTATCAGTTAATTCTTTCCATCTATCCAGTCTTTGCATTTCTTACTTGGATACTGCATGGAA CCTTATCCGTTTACTTGGAGAGTCATTCTTTACAGTAAAAAAAGAGGTAAGCTTTTTGCATTTAAATAAATGTATTTCTT TGTTTCATTTATTCTTATTACAGTTGCGTGGTTATATTTATCTGGGTAAAGGGTTAAATATGTTTTGGGTCCTTGACTTA TACACTGGAATCTAAAATAGTCCCTGAAAAATAAAATCCTCCTTGTTAATCCCTGACAAATTTTGTTTGATAGAAAAAAG TCCCTAATATTGCTTATTTGGCATTATAATTAATCAGAAAGTATTTCCATATGTATCTTCATTAAACCCAGTCATCATAC ACCCTTTTAAAATCAGTTTTGGTCCTTGGGAAATCAATTTAATCCCTAATTTGAGAAACATGAACCCTAATATGCTCAAT TGCAGATTCGTGAGAAGCGTAGAAGAGAAGGAAAAGGTATGTGGTGTCTAGTATCACGAGCATAGCTTTATATTCACAAC AGAATCATATATATTTTTAAGTGTAGCAAAGGGGTTTACAATATTCAATAATAATTTACCCAGCTGCACCAGAACTGCTT CTCATCTCTTCTCACAAACCAGAACTCTTCTTCTTCTTCACCTCTCATGAACTGAACCAAGTTTTTTTTGTAAGCCAAAA TTTTATTAAATTGAAAGTACTACTTCAACCCTATACCTAGAAAAAGACATTATTAAGAGAAAAAAGAAATAGGATTGCAC AGTTGCTAGCATGACAGTTACTTATCTAGGAGGCTATGACATTCATTCTACACATCCCAACACAGTGTCCCTCATCCCCT ACAACAGCCTATGTTAATGAATGATGAACAGCCTATAGCATTTATATCCCACCCATGATTCCTTTGTCACGAATGAAATC CTTAGAAGTCAGTATTCATATCAGTAGGTGAACAGAACCAAAGCTTGAACGCAGCTTTTGCAATTGAGCATTAGGGTTCA AGTTTCTCAAATTGGGGATTAAATTGATTTTCCAAGGACCAAAACTGATTTTAAAAGGTGTAAGATGACTAGGGTTAATG AAGATACATGTGGAAATATTTTTTTGATTAGTTAAAATGCCAAATAAGCAATATTACATCACAGGGACTTTTTTCTATCA AACAAAATATGTCAGGGATTAAAAAAGAGAATTTTATTTTTCAGGGACTATTTTAGATTTTGGTGTAAAGTCAAAGACCC AAAACATATTTAACCCTATTTATTTATTTATTCCAATTTAGGTTTTTTTGGCCTCTTATGTCCGGACTAATACACGATTT TCTCTGTATATTTTAGGCTGAACAGAAACGATTAGCACTATATGCTGCTTTGTTTCTCCCACTTAGAAATACGACTTACA GAGAAAAGAAAAATAAGAAGGTAAGATACTTATTCCTTTTAATTTTGCATTATTGAGCTGCAAGTGCATTGAGTTTGAGA CACGTATGTATGCTTTGAATTGACACATCTAGCACAATATTTATATTAGATTTTCAACTTGAGTTGTTGGTGGCTACAGC AACAACTAGGGATGGCAATCAAAACTAGCTACTAGATAATAGAGGCAGCAATAGCTCGATTCAATTCAAAGCTTAACTAT ATTGAGCTCGAGTTTGATATGATAATTACATAATCAAGCTGAGATTGAATGCCAAATATTGTTCCGTAGAAAACCTCCAA GCGAGCTCAAGATAAATGTTGATCCAAAAAAAAGCGAGCTCAACATATCAAAAAACATAATGAATACAATTGAAATTTTA TATCATGATTTAGTATTCTAATTTGTAAAGCTATTTAGATCTGTAGTCTTGCAAAAAGGCCCTTGGTATCCTAAATTTAA GTTTTTTAAAATGCTAAATGTTTTGCTGCATGTTATCATTTAGTATTCTAATTTTTAAAGCTAATTAGATCTGTTGTCTT ACAAAAAGGCCCTTAGCTCAATTCTACCCCTAGAGAATAGACAATAGAGACAACTATATGTGCTGCATGTCTCTAATGGG GTGTATGATGTATCATCATTATGCTTTGCGTCTAATCTTGTGGTTATTATTTTAAATGACATGGCTAAATAGCCTAATAT GTGTTTCTGAATTGTAGATTCCAGTTGTCAATCACATTATCCGCGAGTCTCTCAAACGAAAAGCTAAAGATGCAGAAACG GTCAGTTTCCTTTTAGCCTGAGTAAAATCCAAATGAATACATTATAACATATAATGTGAGTGGTTGATATGTGTTCCTTA TGTTGGTTAATTTGTTTGTAATTTTTCATCAAAATCCAGGTTCTTGATTTATACCGAGCATCATATAAACTCTCGTTGCT GATTCCTTATCTAGTATCTGGTGAAGATATCCAAGTTATTGATCATGATTGGATGCGACACGTGACCGATGTCCCTGTCT CTTCTAGAGTCCGGGTACTAACAGGTACAGCTTTTCTGCTGTGCTACCTTGGTAGCATTGGTCGTGTCACGTGTGCTGTT TCTCGTAGCTTAAATATAATTTTGACTTTATTCTAAAATTATAGCCTTTTCAACTTGACATTATGCTGTAGACTGAAGTT TATCGTGATTCCATATATCGTAGTTTTGATTAAATTATTGTCTTTCTAGTGGAAAGTGGGATGAGTTGCTGTTGCACTCC CCTTAATTCATTTTGCAGTCAGATTTTTCCTGTGTTGATTTTTTGCTTTGGTAAAGGCACGAGCAAAACTTGGCCTGTTA CATAATCAAATGTTTTTTAAGCCACTTGACTACGTAACATTGCATCAATAAAACAAAACAAAAAAAAGATTTGGGATTTC CTTATATTATGAGGTCTAAGAATCTGCTTGTTTGATCTATTTTAACTTTTATTTTAAAAATATCACTAATAAAGTCTGTT TATTTGTGCCTTTGAAAAAATTAAGAATATGAAAAAAGGTTGTATCTATAACTTCCTTATAAAGTAAGTTTTTTTTAATA ATTGTAATCAAACGCGAAAAATAGCTTCTGCTTATATAAAATGTTTCAAAAATAATGTGTTTTTGTACAATTTTGCTAAT AACTTCTATCTGATATGGCTGAGCTCTTCTTATATATTATTTATTTAGGGTTTCTCTTAAGAGAGATCAAACATTATTGG CGAGTTGCACTGTTAATGTCGACAATAGTACATCCCATTGACATAAATGACACTGAGGACGAGTACTCACAGTTGTGCAA ACGAAGAGATCTGTTTAGTACTGTGGAGAATTCTATAATCAAACTAGGTGAGCTTATATGCTTTCTGTCCCTTGTATGAG AATATATTTTAATTTGTAGTTCTACTACTTGCTTTTGTGGTGCCTTATATTGTTTGAGTAAGTCAAGTGTCTGTAGCATT TTTGTCTACTGCACCTTCTAGTTGTTCTGTCAGCCTTATTCATGCCAATGATCCTATGTTGCTGAAAATTTGAAGTTTAC ATTTGTTTTTTCTATTATATCTAAACTTGTCATTGTGTTTCTTTGATCTAAATAATTGAATGCTCAGTTTGGCTTGTGAT CATTCATTCCTTCCTTTTGGGATGCTTTACTGATGTAGGAAAGCTTTGTTTGCACTAGCAGTGCAGTCCCATTAAGAACT CAAAACTGAAATAAGAGAGCCTAAATGAGTTGGTTAAGGTGAAAGTGATTGGGAGTTCACATTCTGTGATCATGTGACAA TGCTCTCAGATGCTGCTAGCACGCAACTGTTTGAATTAGTGGCAATTTCATTTCTCTGTGAATATCAATGAACCATGTTT TGGTAAAAAGTGTAGTTTTGGATTAGAAACTTAGAAACGTGAAGAAAAATCAAAAGTAAAAGAAAAGGACAAAATTGATT GCTATATAGGACACAAATGCGTTTTCTTTGACAAGAACTGAGTGCTGGTGGTATGCATGTAGTTTACTAGGCCTAAAGCT ACTTTTTTATTAACACATTTTGGTTGAGCAGGCCTTGATGAAGTATGGGATGCAAAACAATTGATCAATGGGAAAGATGT TATGAATACTCTACAGGTTAAAGGAGGACCACTTGTTAAGGAGTGGGTAAGTCATTCTGCTTCCCTCATTTTCACTCACA GGCGTGCACACCAACACCTTGAAATTTGAGATTTTTATTCATGTCTTTTGTGATTTTCACTTGCAGCTGGATAAAGCAAT GGCTTGGCAACTTGCCTATCCATCTGGAACTGCAGAGGAATGCATTGAATGGTTGACAGAAGCCAATTCTAAACGTGTAA AGTTGGAGTGAGGTTGATTGTGTTGTTGAATTGTCTATTCCTTACCTTGTTAAGGATTGAGAGAGCACCTATGCCTTGGA TGGAGGAGACTTAGCCTGTTGGCTGTGATTATATTGGGAATACATCACACACCGTTGGCTTATCATTACATCACTAACAA CACTATGAAGGCTAGGGCAGTTCCTTCTCACGTTTGGGATGTAAATTTGCATCTGGGGAAGTATTATTTATTTTATTTAT TCTTCTTAATAAAAGGATGTGAATATATATCATGGCCTATTTTAATATAATTAAGTAATTATATTCCTTCCTGTCAAAAA ACAAAAGTAATTATATTCTTATACTGTCAAGTACTACCTTTTTTAAAAGATAAGATTAAATACAACATTACTCTTTTTCT GGGTCGTTAAGCACTCATTGCCTCACTTGGAACTTGTAGATGTTTTACAATCAGGAATCAAGTAACCATTTCTACTTTTC GTC
CDS sequence (LotjaGi5g1v0281000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGACTTGCTTTCAAAACTCTTCTTCTAGTGCCTCCTAAACCCAAACCCAATTCCTTCGCACATACACCACGAACCCT TCTTCTTCAACCTCCCGCCAAAACCCTTGTTCTCCTACGAGCAGCCCCTACGCCGTCGTTTCGGTGCTCCGCTTGCGCAC CAATGTCTACCCACCTGCACGTTCGCGACGGTATCGAACCCTCCCTCAAGGAGGAGGAAATCTTCGATCGCCTCCGCAAA ACCCTCAGCCACTTCCACCTCGACACTCAGCTCCGAGTCGCCGGCGGCTGGGTTCGCGACAAGCTTCTGGGGAAAGAATG CAAGGACATTGATATCGCTATTGACAATATGATGGGTACTGAGTTCGCGGATAAGGTTAGGGAGTACTCCTTGTCCTTCG GCAAAGAAGAAGATGTAAAGGGAGTCCATGTTATTGAGAGCAACCCTGACCAGTCCAAACATTTGGAAACAGCAAGGATG TCTCTGTTTGGTCAAGAGATTGATTTCGTTAACCTAAGGAGTGAAGAATACACTGAGAATAGCCGCATTCCTTCTAAGCA ATCATTTGGCACACCGGAAGAGGATGCATATAGGAGGGATTTGACAATTAACAGCTTATTCTACAATATCAACACTAAAT TAGTTGAAGATTTCACTAAGAGAGGGATTTCAGACCTTAAGTCTGGAAAGATAGTTACTCCTTTACCTCCAAAGTCCACA TTTCTTGATGACCCGTTACGAGTTCTTCGAGCCATTCGGTTTTGTGCTAGATTTGACTTTACTCTTGATGAAGATCTGAA AGTAGCTGCTGCATGTGATGATGTGAAAGATGCTCTAGCTGCTAAAATTAGCAGAGAGCGCATTGGAACAGAGATTGATC TTATGATATCTGGAAATCAACCTGTTAAAGCAATGACTTATATTTCTGAGCTGACAATATTTTGGATAGTATTCAGTCTT CCTCCTGAGTCTGTACCTGCCATTCCAGATGGATGTGAAAGTCTTTGCATTTCTTACTTGGATACTGCATGGAACCTTAT CCGTTTACTTGGAGAGTCATTCTTTACAGTAAAAAAAGAGGCTGAACAGAAACGATTAGCACTATATGCTGCTTTGTTTC TCCCACTTAGAAATACGACTTACAGAGAAAAGAAAAATAAGAAGATTCCAGTTGTCAATCACATTATCCGCGAGTCTCTC AAACGAAAAGCTAAAGATGCAGAAACGGTTCTTGATTTATACCGAGCATCATATAAACTCTCGTTGCTGATTCCTTATCT AGTATCTGGTGAAGATATCCAAGTTATTGATCATGATTGGATGCGACACGTGACCGATGTCCCTGTCTCTTCTAGAGTCC GGGTACTAACAGGGTTTCTCTTAAGAGAGATCAAACATTATTGGCGAGTTGCACTGTTAATGTCGACAATAGTACATCCC ATTGACATAAATGACACTGAGGACGAGTACTCACAGTTGTGCAAACGAAGAGATCTGTTTAGTACTGTGGAGAATTCTAT AATCAAACTAGGCCTTGATGAAGTATGGGATGCAAAACAATTGATCAATGGGAAAGATGTTATGAATACTCTACAGGTTA AAGGAGGACCACTTGTTAAGGAGTGGCTGGATAAAGCAATGGCTTGGCAACTTGCCTATCCATCTGGAACTGCAGAGGAA TGCATTGAATGGTTGACAGAAGCCAATTCTAAACGTGTAAAGTTGGAGTGA
Protein sequence (LotjaGi5g1v0281000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRLAFKTLLLVPPKPKPNSFAHTPRTLLLQPPAKTLVLLRAAPTPSFRCSACAPMSTHLHVRDGIEPSLKEEEIFDRLRK TLSHFHLDTQLRVAGGWVRDKLLGKECKDIDIAIDNMMGTEFADKVREYSLSFGKEEDVKGVHVIESNPDQSKHLETARM SLFGQEIDFVNLRSEEYTENSRIPSKQSFGTPEEDAYRRDLTINSLFYNINTKLVEDFTKRGISDLKSGKIVTPLPPKST FLDDPLRVLRAIRFCARFDFTLDEDLKVAAACDDVKDALAAKISRERIGTEIDLMISGNQPVKAMTYISELTIFWIVFSL PPESVPAIPDGCESLCISYLDTAWNLIRLLGESFFTVKKEAEQKRLALYAALFLPLRNTTYREKKNKKIPVVNHIIRESL KRKAKDAETVLDLYRASYKLSLLIPYLVSGEDIQVIDHDWMRHVTDVPVSSRVRVLTGFLLREIKHYWRVALLMSTIVHP IDINDTEDEYSQLCKRRDLFSTVENSIIKLGLDEVWDAKQLINGKDVMNTLQVKGGPLVKEWLDKAMAWQLAYPSGTAEE CIEWLTEANSKRVKLE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
| PANTHER | 57 | 571 | 515 | 2.7E-208 | – | |
| Gene3D | 61 | 227 | 167 | 3.9E-37 | ||
| CDD | 73 | 227 | 155 | 1.03246E-40 | ||
| SUPERFAMILY | 73 | 228 | 156 | 4.5E-30 | ||
| Pfam | 91 | 231 | 141 | 6.6E-32 | ||
| SUPERFAMILY | 231 | 567 | 337 | 2.88E-37 | – | |
| Coils | 397 | 417 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Biological process | RNA processing | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. | ||
| Molecular function | Nucleotidyltransferase activity | Catalysis of the transfer of a nucleotidyl group to a reactant. |
Expression pattern of LotjaGi5g1v0281000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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