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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0296600 |
| Transcript ID | LotjaGi5g1v0296600.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heat shock protein 90; TAIR: AT5G52640.1 heat shock-like protein; Swiss-Prot: sp|P51819|HSP83_IPONI Heat shock protein 83; TrEMBL-Plants: tr|A0A151U689|A0A151U689_CAJCA Heat shock protein 83; Found in the gene: LotjaGi5g1v0296600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:61348484..61351013) extracted from Lotus japonicus Gifu genome v1.2.
ATGTGTGACGCCGAGACCTTCGCATTCCAGGCTGAGATCAACCAACTCCTCAGCCTCATCATCAACACCTTCTACAGCAA CAAGGAGATTTTCCTCCGTGAACTCATCAGTAATGCCTCCGACGTAAGCCTCTCCTCCTTCCACCACCACCATTAACATT TTACTTTCCTTCGTTTCGTTAATCACTCAATTTGATTTGTGTGTTTGTTACATTTAGGCTCTGGATAAAATTCGATTTGA GAGCCTCACCGATAAGACGAAGCTTGATGCTCAACCAGAGCTTTTCATTAGACTCGTTCCTGACAAGGCTAACAAGACTC TCTCCATCATTGACAGTGGCGTTGGCATGACCAAAGCAGGTACGTAGTTGTAATGTACCTCTTTATCCGTTTTATTTAAA TTGAGGTTGCGATCGCGGTTGCAGTTGTCGCGGAATTGTAGACAAATGCAGGTTGATGCGGCCGCAACTGGGTGTGACCC TGAAATATATTATGTTGCGGCCGCAATTTGAAACAATGGTTTTATTGTGAGAATTTGATTAAATGTGCTGTGCTATGCTT CTTATTGTGTGTGTTTATGTGGTGTGGTTTGGTTTCAGATTTGGTGAACAATTTGGGAACCATTGCGAGGTCTGGGACGA AGGAATTCATGGAAGCGTTACAGGCTGGGGCTGATGTTAGCATGATTGGCCAATTTGGCGTTGGTTTCTACTCTGCTTAC CTTGTTGCTGAGAAGGTCATTGTGACCACCAAGCACAATGACGATGAACAGTACATTTGGGAATCACAGGCTGGTGGATC CTTCACTGTGATCAGGGATGTGAATGGTGAACAATTAGGAAGAGGAACTAAGATTACCTTGTTCCTCAAGGAGGATCAGG TAAAGAAATTGAAGTTTTAACTACGATTGTTTTTTCTTTTTCTTTTGGGTGTTTGTTTTAGTCAAATTGTTAATTGGTTG AGTCTTGTTTGTGCAACAGTTGGAGTATTTGGAGGAGAGAAGGATTAAGGATCTTGTGAAGAAGCACTCTGAATTCATTA GCTATCCAATTTACCTCTGGACTGAGAAGACAACTGAGAAGGAGATCAGTGATGATGAGGAGGATGATGAGTCCAAGAAG GAGAAGGAAGGAGAAGTTGAGGATGTTGATGAAGAGAAGGAGAAGGATTCTAAGAAGAAGAAGATTAAGGAGGTTTCTCA TGAGTGGGAACTCATCAACAAGCAGAAACCAATCTGGCTGCGAAAGCCAGAGGAGATTACCAAGGATGAGTATGCTTCCT TCTACAAGAGCCTCACCAATGACTGGGAAGACCACTTGGCTGTCAAGCATTTCTCAGTGGAGGGTCAGCTTGAGTTCAAG GCCATTCTATTTGTTCCCAAAAGGGCACCTTTTGATCTGTTTGACACAAGAAAGAAGATGAACAACATCAAGCTTTATGT GAGGAGGGTGTTCATCATGGACAATTGTGAGGAGCTGATTCCTGAGTATCTTGGGTTTGTCAAGGGTGTGGTTGACTCTG ATGACTTGCCACTCAACATTTCCAGGGAGATGCTGCAGCAGAACAAGATCTTGAAGGTGATCAGGAAGAATCTTGTGAAG AAATGCATTGAGATGTTCAACGAGATCGCGGAGAATAAAGAGGATTACAACAAATTCTATGATGCTTTCTCCAAGAACTT GAAGCTGGGTATCCATGAAGATAGTCAGAACAGGGCTAAATTGGCTGATTTGCTGAGATACTATTCTACAAAGAGTGGAG ATGAGTTGACTAGTCTCAAGGACTATGTTACCAGAATGAAGGAGGGGCAGAAGGACATTTACTATATCACAGGAGAGAGC AAGAAGGCTGTGGAGAATTCACCATTCTTGGAGAGGCTGAAAAAGAAGGGGTATGAGGTGCTGTTCATGGTGGATGCAAT TGATGAGTATGCTGTTGGGCAATTGAAAGAGTATGATGGGAAGAAGTTGGTTTCTGCTACTAAGGAGGGATTGAAATTGG ATGATGAAAGCGAGGAAGAGAAGAAGAAGAAAGAGGAAAAGAAGAAGTCATTTGAGGATCTTTGCAGGACAATGAAGGAC ATCTTGGGAGACAGAGTTGAGAAAGTGGTTGTCTCTGACAGGATTGTGGATTCACCCTGCTGTTTGGTGACAGGGGAATA CGGATGGACTGCGAACATGGAGAGGATCATGAAGGCTCAGGCGTTGAGGGATAGCAGCATGAGCAGCTACATGTCGAGCA AGAAGACCATGGAGATTAACCCGGATAATGGGATCATGGAGGAGCTGAGGAAGAGGGCTGAAGCTGATAAAAATGATAAA TCAGTGAAGGATTTGGTGTTGCTTCTCTTTGAGACTGCACTCTTGACTTCTGGTTTCAGCCTTGATGATCCAAACACATT TGCTGCTAGAATTCACAGGATGTTGAAGCTTGGTCTTAGCATTGATGAGGAGGAGACTGGTGGAGATGAAGATATGCCTC CACTGGAGGAGGATGGTGCTGAGGAGAGTAAGATGGAGGAAGTTGACTAA
CDS sequence (LotjaGi5g1v0296600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCAAAGCAGATTTGGTGAACAATTTGGGAACCATTGCGAGGTCTGGGACGAAGGAATTCATGGAAGCGTTACAGGC TGGGGCTGATGTTAGCATGATTGGCCAATTTGGCGTTGGTTTCTACTCTGCTTACCTTGTTGCTGAGAAGGTCATTGTGA CCACCAAGCACAATGACGATGAACAGTACATTTGGGAATCACAGGCTGGTGGATCCTTCACTGTGATCAGGGATGTGAAT GGTGAACAATTAGGAAGAGGAACTAAGATTACCTTGTTCCTCAAGGAGGATCAGTTGGAGTATTTGGAGGAGAGAAGGAT TAAGGATCTTGTGAAGAAGCACTCTGAATTCATTAGCTATCCAATTTACCTCTGGACTGAGAAGACAACTGAGAAGGAGA TCAGTGATGATGAGGAGGATGATGAGTCCAAGAAGGAGAAGGAAGGAGAAGTTGAGGATGTTGATGAAGAGAAGGAGAAG GATTCTAAGAAGAAGAAGATTAAGGAGGTTTCTCATGAGTGGGAACTCATCAACAAGCAGAAACCAATCTGGCTGCGAAA GCCAGAGGAGATTACCAAGGATGAGTATGCTTCCTTCTACAAGAGCCTCACCAATGACTGGGAAGACCACTTGGCTGTCA AGCATTTCTCAGTGGAGGGTCAGCTTGAGTTCAAGGCCATTCTATTTGTTCCCAAAAGGGCACCTTTTGATCTGTTTGAC ACAAGAAAGAAGATGAACAACATCAAGCTTTATGTGAGGAGGGTGTTCATCATGGACAATTGTGAGGAGCTGATTCCTGA GTATCTTGGGTTTGTCAAGGGTGTGGTTGACTCTGATGACTTGCCACTCAACATTTCCAGGGAGATGCTGCAGCAGAACA AGATCTTGAAGGTGATCAGGAAGAATCTTGTGAAGAAATGCATTGAGATGTTCAACGAGATCGCGGAGAATAAAGAGGAT TACAACAAATTCTATGATGCTTTCTCCAAGAACTTGAAGCTGGGTATCCATGAAGATAGTCAGAACAGGGCTAAATTGGC TGATTTGCTGAGATACTATTCTACAAAGAGTGGAGATGAGTTGACTAGTCTCAAGGACTATGTTACCAGAATGAAGGAGG GGCAGAAGGACATTTACTATATCACAGGAGAGAGCAAGAAGGCTGTGGAGAATTCACCATTCTTGGAGAGGCTGAAAAAG AAGGGGTATGAGGTGCTGTTCATGGTGGATGCAATTGATGAGTATGCTGTTGGGCAATTGAAAGAGTATGATGGGAAGAA GTTGGTTTCTGCTACTAAGGAGGGATTGAAATTGGATGATGAAAGCGAGGAAGAGAAGAAGAAGAAAGAGGAAAAGAAGA AGTCATTTGAGGATCTTTGCAGGACAATGAAGGACATCTTGGGAGACAGAGTTGAGAAAGTGGTTGTCTCTGACAGGATT GTGGATTCACCCTGCTGTTTGGTGACAGGGGAATACGGATGGACTGCGAACATGGAGAGGATCATGAAGGCTCAGGCGTT GAGGGATAGCAGCATGAGCAGCTACATGTCGAGCAAGAAGACCATGGAGATTAACCCGGATAATGGGATCATGGAGGAGC TGAGGAAGAGGGCTGAAGCTGATAAAAATGATAAATCAGTGAAGGATTTGGTGTTGCTTCTCTTTGAGACTGCACTCTTG ACTTCTGGTTTCAGCCTTGATGATCCAAACACATTTGCTGCTAGAATTCACAGGATGTTGAAGCTTGGTCTTAGCATTGA TGAGGAGGAGACTGGTGGAGATGAAGATATGCCTCCACTGGAGGAGGATGGTGCTGAGGAGAGTAAGATGGAGGAAGTTG ACTAA
Protein sequence (LotjaGi5g1v0296600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVIRDVN GEQLGRGTKITLFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKTTEKEISDDEEDDESKKEKEGEVEDVDEEKEK DSKKKKIKEVSHEWELINKQKPIWLRKPEEITKDEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPKRAPFDLFD TRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKED YNKFYDAFSKNLKLGIHEDSQNRAKLADLLRYYSTKSGDELTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLERLKK KGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKLDDESEEEKKKKEEKKKSFEDLCRTMKDILGDRVEKVVVSDRI VDSPCCLVTGEYGWTANMERIMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALL TSGFSLDDPNTFAARIHRMLKLGLSIDEEETGGDEDMPPLEEDGAEESKMEEVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 1 | 118 | 118 | 4.9722E-62 | – | |
| Gene3D | 1 | 126 | 126 | 2.5E-66 | ||
| SUPERFAMILY | 1 | 129 | 129 | 4.01E-42 | ||
| PANTHER | 1 | 159 | 159 | 0.0 | ||
| PIRSF | 1 | 614 | 614 | 6.5E-224 | ||
| Hamap | 1 | 581 | 581 | 20.698 | ||
| PANTHER | 1 | 159 | 159 | 0.0 | – | |
| PRINTS | 9 | 26 | 18 | 4.4E-45 | ||
| PRINTS | 34 | 56 | 23 | 4.4E-45 | ||
| PRINTS | 86 | 103 | 18 | 4.4E-45 | ||
| Pfam | 100 | 610 | 511 | 7.0E-238 | ||
| PRINTS | 104 | 122 | 19 | 4.4E-45 | ||
| Gene3D | 127 | 168 | 42 | 2.5E-66 | – | |
| MobiDBLite | 131 | 162 | 32 | - | – | |
| Coils | 144 | 164 | 21 | - | – | |
| MobiDBLite | 147 | 162 | 16 | - | – | |
| PANTHER | 161 | 614 | 454 | 0.0 | ||
| PANTHER | 161 | 614 | 454 | 0.0 | – | |
| Gene3D | 178 | 351 | 174 | 1.5E-82 | – | |
| SUPERFAMILY | 179 | 434 | 256 | 6.52E-110 | ||
| Gene3D | 352 | 439 | 88 | 4.6E-41 | – | |
| Coils | 433 | 459 | 27 | - | – | |
| MobiDBLite | 434 | 453 | 20 | - | – | |
| Gene3D | 440 | 585 | 146 | 1.8E-64 | ||
| SUPERFAMILY | 458 | 580 | 123 | 1.31E-38 | ||
| MobiDBLite | 587 | 614 | 28 | - | – | |
| MobiDBLite | 589 | 614 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi5g1v0296600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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