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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0301400 |
| Transcript ID | LotjaGi5g1v0301400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytochrome b561; TAIR: AT4G25570.2 Cytochrome b561/ferric reductase transmembrane protein family; Swiss-Prot: sp|Q8L856|ACFR1_ARATH Transmembrane ascorbate ferrireductase 1; TrEMBL-Plants: tr|B7FIG9|B7FIG9_MEDTR Transmembrane ascorbate ferrireductase; Found in the gene: LotjaGi5g1v0301400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:61853966..61857695) extracted from Lotus japonicus Gifu genome v1.2.
CCAATTTGCACACATATATATCATCTCTATTTAAATTTAATTAATAGAAAGGAAAAGGAAAAAACAAAAATAGTAAGAAA TGGAGGGGGTAAAGAAAGAAAGTATGGTATAGAAAGAGAGACGTGGCACGCATCTAGCGAGGAGAGGAAAAAGATCTTGA TCGTGATCGTACGGGTGAGAGGAGCAGTTAGATATGATTTGGTGTAGGTAAGTCCACGCACGCATATAGTAACTACCAAC AACACTTTGATCCCCAATTTCAACACTCTCTCTCACTACGATGGCGTTGGGTGTCGCTGCTCTTCCGTTCACATTCGTCG TCCACGTTCTCGGTCTCGCCGCCGTCGTCTTAGTCTTGGTCTGGAACCTCTACTTCAGAGGTGGCTTAGCTTGGGATTCT GAAAACAAAGCCCTCATTTTCAATGTACCTTTCTCTCCCTCTTTTCCTTCTAATTCGCTTCGCTATTGTGTCTCTGTTTC TGCATAATTGAATCTTACTACTGTTTACTGATTTTGAATTTTAAATCTGGCCTTCCAATTTTGTTCCTGGGAAATCGATT ATGCGCTCAACTTCCACTTCTACACTTCCTATTTTAGATTTCTCATTATTACTTTAGAGTTAACTGAATGACAATCACTA AGCAAATTTTTTAGCAAACATTTAAGTAATTTTGATATGATTCGTGAAGTATTACAAATTCTACTAATAGATAGTTACGC ATCTATTCCTGGGTTCGATTTCCGGGTTCAATTTCCGGGCGGTGCATATGGAGAAACATTTGTTGGAAGAGGTCTACTTA TTAAATATGATATCTCCGAGCCTCGAAGGATTAATCTTACGGCGCAGGTCGTGGAAAAAGCTTGGGAAAAATATTTATAA GTTCTTCTGTTTGTTGAATTACATATATGAATTACTACCTAATCTTATCTTTTTGAGCCTGCTTCTGTTGCCACTTGTTA TAAATTAAATTTGTCTAAAGTAGTCTATTTAAAGCCCATTCATATGTAATAGATTATAGTGCCACTTGCATATCCCCTTT TTTGTCTCATAATTCATATTAGCACGTATCTCTATGACATGATTAGAACCATGCTTTATCTGGAATTCTTCATTGTGTGG CTCAGATCATTTCTTATGATCAAAGTCTTTTTTTTTTAAGTCAGTCATTTAATTGTCATACTAATATTTTATTAATTATA CTTTGATGAATTATTGGCCTCGTTTCAAATTTAATAATTGACGGGGTCCAAAATTTATAACCTTCATGATGTCCATGAGC AATAGATGCTTTGCTTGCATACCTGTTTTGTAATTTTTAATAAGAAATAGGCTTTCACGTGCTATTGCTTTTATAAGTTT TATTTCTATACAGTGCCAAGAAGACGTGGATAAATGATACTCTTGCTTGGTTCTTGTTCGCTGATGCTAACATTAATTAA CTCTAAACTACCACGTGCATGTGTCACTTTCTTCTAACAAAAAATTGATATGCTTGTTTTGTTTAATTAGTACTAACTAG TTTCTAATTAAAATATATATATAGTTGAATTGAGTTATTAATTTTGTGAAGTCCTATATCTGATGTATAATTTTCTTTTG TACAGCTTCATCCTGTTCTTATGCTTATTGGCTTAATAGTTATTGGAGGTGAAGGTAAACAAATAAGTTTACACAATTTA CTGCTTTTTGAATCAATGACTTTTGATTTTGTAAACCTATAGTAACTGTTTCACTATTTTCTCATGTGTTAATTTTTTTT TTTGCAGCCATTGTAAGTTACAAATCTCTTCCCTTGAAGAAGGAAGTGAAGAAGCTGATACACCTTACCCTCCATGCCAT TGCATTAGTACTTGGAATAGTTGGAATTTGTGCTGCGTTCAAGAATCATAATGAAAGTGGGATTGCCAATCTGTACAGCT TGCATTCATGGCTTGGAATTGGGGTTATTTCCCTATATGGTGTTCAGGTAGACCACTAGATAAGACTAAATTATCCTGTA AATATGGCATTCTTTGAAAACAGGATATGATTTTGGTCAAATTAATGGTTTCTTGTTGCCATTGCTTATGCTGTTTACTG CAAATACATGACTAAGGCATTGTTTTTCTGTTTTTCAACTCAATGGAATATGAGAGCTTGGGCTTACAGTTTAGTTTGTT TGGATATGTTGAGTTTAATGTAAATGAATTTTCATCTCATTTCATAAGAAGAGTTTCACTCACTTTTTGCTTTGAAGTGT GTGCTAACTTTCATTTCCATCGAGTCCAATGGATATCCAAACATAGTCTTTGGGTAAACAACTTAACTAAGCGCTTATTG TATAAGTGTTTAATTCATAAGCTAATTTGATAAACTTATTGAAATAGGCTTAAAATATCTTATAGGTAGGTATAAATGTT TATTAATAAGCTAACCTGATAAGCTTATGAACATAAATGCAAAACAGCTTTTATGTAGGTCATAAGCTATTTTCATTAGC TGACCAAACATTTGCATTAACGTTTATGCCATAAGATAATCTCAATTACAACTATGGACTTCAATTCATGTCTAGATTAT TCCTTGAGTTTACCATATGCTTAGTGTTAAATATGATTTGTATTATAACTCATTTGTCTTCCAGCATTGTCTAACATTGT ATTTTTAACTTGTAGTTCATATTTGGGTTTGTGACCTTTTTCTACCCTGGTGGGAGTCCAGCCATTAGACGTGACACACT CCCTTGGCATGTCCTGTTAGGGCTGTTTATATATATCTTGGCTATTGGCACTGCTTCACTTGGGTTTCTAGAGAAGCTCA CATTCCTGGAGAGCTCAGGATTGGCAAAATATGGTTCTGAGGCCTTGCTTGTCAACTTCACTGCTATTATCACGATCTTA TTTGGTACCTTTGTTGTGTTATCTGCTATATCTGAAGCTCGCGCAGCCACAGAAGATGAGTACACAGCCATATAGATTTC ACTTTGCATCTGATTAATCTGAGGTCTGCTGCAAGTTTGTATTCAGTAAAGGGAATAATAATATCTGTTGTTTATATGCT TGGACTCAGCTTGTAAGTTGTAAGTAATCATCAACTGTATCCTGGAAACATGTAATATTACATTGGTACGTATCACACGA GTTGCTATTGACTGTGAAGAGCATTTTCTTGAAAGTAGTTTTCGTTGTTACAATTGTTGCTTCTCAGAAAGCAGATATAG TGGGCTTATTGAAGAAATATAGAGGTGTGGAATTGATTCTGAGATTCATAATTTTTGTAGAGTTGTTGAAGTGGAGTAAA TAATTAGTTGAATTACTCAGACTTGCTATTGGAGTTGTCGATATGAGCTTTAAGATCATGTTTGGATCTCTTTCTCTTTG ATGAGAATCAATTCCGAAACTCATAAGCTATCCACAAAAGTTTCTCTCCGAAATTAATTTTGGTTTCAAATTCGATGATA GAAGAGTTACCGAACATGCACTAACTTGTATGCCAAACCGGCTGTGCTGATTTGACCCAGTTACTTAACTCATGAGCCAA AGTGAGTTTGTTCACTTAACCTAATTTATTTTACATATTATCTTAAATTCAAAAATTAAACTAAAAGGGATATATTTCCT ATTATTTTCTTAAAATTTTATAGTTCTTTTATCTATTTATAAATTAGGTGATCCAACTCACCTAACCTATCAACTTACAG TCGATTGAGCTGGGTTATATGTTTTTTTTTTCACACTAAACAAAGGCAAG
CDS sequence (LotjaGi5g1v0301400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTTGGGTGTCGCTGCTCTTCCGTTCACATTCGTCGTCCACGTTCTCGGTCTCGCCGCCGTCGTCTTAGTCTTGGT CTGGAACCTCTACTTCAGAGGTGGCTTAGCTTGGGATTCTGAAAACAAAGCCCTCATTTTCAATCTTCATCCTGTTCTTA TGCTTATTGGCTTAATAGTTATTGGAGGTGAAGCCATTGTAAGTTACAAATCTCTTCCCTTGAAGAAGGAAGTGAAGAAG CTGATACACCTTACCCTCCATGCCATTGCATTAGTACTTGGAATAGTTGGAATTTGTGCTGCGTTCAAGAATCATAATGA AAGTGGGATTGCCAATCTGTACAGCTTGCATTCATGGCTTGGAATTGGGGTTATTTCCCTATATGGTGTTCAGTTCATAT TTGGGTTTGTGACCTTTTTCTACCCTGGTGGGAGTCCAGCCATTAGACGTGACACACTCCCTTGGCATGTCCTGTTAGGG CTGTTTATATATATCTTGGCTATTGGCACTGCTTCACTTGGGTTTCTAGAGAAGCTCACATTCCTGGAGAGCTCAGGATT GGCAAAATATGGTTCTGAGGCCTTGCTTGTCAACTTCACTGCTATTATCACGATCTTATTTGGTACCTTTGTTGTGTTAT CTGCTATATCTGAAGCTCGCGCAGCCACAGAAGATGAGTACACAGCCATATAG
Protein sequence (LotjaGi5g1v0301400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALGVAALPFTFVVHVLGLAAVVLVLVWNLYFRGGLAWDSENKALIFNLHPVLMLIGLIVIGGEAIVSYKSLPLKKEVKK LIHLTLHAIALVLGIVGICAAFKNHNESGIANLYSLHSWLGIGVISLYGVQFIFGFVTFFYPGGSPAIRRDTLPWHVLLG LFIYILAIGTASLGFLEKLTFLESSGLAKYGSEALLVNFTAIITILFGTFVVLSAISEARAATEDEYTAI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 230 | 230 | 7.3E-118 | ||
| PANTHER | 1 | 230 | 230 | 7.3E-118 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| Gene3D | 2 | 226 | 225 | 3.7E-84 | – | |
| TMHMM | 10 | 32 | 23 | - | – | |
| Phobius | 12 | 32 | 21 | - | – | |
| ProSiteProfiles | 13 | 216 | 204 | 48.196 | ||
| Phobius | 33 | 51 | 19 | - | – | |
| CDD | 40 | 183 | 144 | 3.73579E-74 | – | |
| TMHMM | 44 | 66 | 23 | - | – | |
| SMART | 49 | 175 | 127 | 8.5E-52 | ||
| Pfam | 49 | 181 | 133 | 7.5E-46 | ||
| Phobius | 52 | 69 | 18 | - | – | |
| Phobius | 70 | 80 | 11 | - | – | |
| Phobius | 81 | 104 | 24 | - | – | |
| TMHMM | 81 | 103 | 23 | - | – | |
| Phobius | 105 | 115 | 11 | - | – | |
| TMHMM | 116 | 138 | 23 | - | – | |
| Phobius | 116 | 141 | 26 | - | – | |
| Phobius | 142 | 152 | 11 | - | – | |
| TMHMM | 153 | 175 | 23 | - | – | |
| Phobius | 153 | 175 | 23 | - | – | |
| Phobius | 176 | 194 | 19 | - | – | |
| TMHMM | 195 | 217 | 23 | - | – | |
| Phobius | 195 | 216 | 22 | - | – | |
| Phobius | 217 | 230 | 14 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. |
Expression pattern of LotjaGi5g1v0301400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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