Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0316100 |
| Transcript ID | LotjaGi5g1v0316100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase; TAIR: AT3G05990.1 Leucine-rich repeat (LRR) family protein; Swiss-Prot: sp|Q9ZQQ7|Y2144_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440; TrEMBL-Plants: tr|G7IE12|G7IE12_MEDTR Serine/Threonine kinase, plant-type protein, putative; Found in the gene: LotjaGi5g1v0316100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:63394673..63400406) extracted from Lotus japonicus Gifu genome v1.2.
AAGAGTTATGAAGTGTGAAAAATGGACATAGGATGTCACCGCCGCCACCACTGGTACCACGACTAACATCCACCATCATC ACTTTTCATCTCACTAGTTGGTGTTGGCAGAGACGACACTTGTGACATTGATGGCCGCTGTAGCTGCCAACCAAATCAAA GAAAGAAAGTCAAATCCACTAATGAAATGCTTTCTATACTAGCTCTACCTCAACACAAAACATGCTGCAAGTGCAACAGA ACCGGCTCTTCAATCATTCATTTTCGTATATAATAATAATGGAAAAACGAGTAGAATGTTGCCGTCTTCCTTTCAGTTTT GACCAGTAAACAAAAATCGTTGTTTCCCGCGTCACACAACTCAGTCACAACACACAACAACAACTATTATTCTTTTCTTC ATCCCTTCCTTCCTGTTTTCTTCCCCACCACTTCTTCTTCTCTTTCCCCTAACCACTCCCCCCAAACACCACCACCACCA CCATGTCCCTCATCTTCCTCCTCCTCTTCTCACCCTTCTCCCTCTCCCTCTCCCAAACCCCACCACCACCACCCAGAGGT TTCCTCATCAACTGTGGGGCCCCCTCCGCGACCCAAATCGACGGCCGTTCATGGCTTTCCGATTCCGGATTCATCTCCAC CGGAACACCCAAAAACGTGACCTCCCCTGTTCTGATCCCCACTCTCAAAACCCTCCGATCCTTCCCTTTAAACATCAAGA AGCACTGCTACAATAATATTCACGTGTTTCGCGGCTCAAAGTACCTGGTGCGGTCTACGTATTTCTACGGCGGAGTCAAC GGCCCCGATCACCCTTCGCCGCCGGTGTTTGACCAGATCGTCGATGGGACCTTGTGGACTGTGGTCAACACGACTGCGGA TTATGTCAACGGGAACTCTACGTTCTATGAAGGGGTTTTCTTAGCTAAGGGGAAGTTCATGACCTTCTGTATCGGCTCGA ACAATCGCACCGAATCTGACCCGTTTATCTCTTCTTTGGAGTTTTTGATTCTCGGTGATTCCCTCTACAACACCACCGAT TTCAACAATTTTTCCATGACCTTGGTTGCCAGGAACAGTTTTGGCTACTCTGGATTACCCATTCGGTCAGTGTTAAATCC TTCTTTCCTTGATTGATTCCTTTTGTTTGTGATTCATTTCTGCATATATTCATTTGGTTATAGTCTGGAGTTTGTGGATT TTTTTTTCAATTTTTTTTATGTCTGATCTTATTTTGGAATGCTTCACCATGAAAATTCTCTTATGTAATTAGCTGATCCC TAGTCCCTAGAGTATTTTTCTCCTTTGATAATTTGGTGAGGAAGAACAACAACAACAACCTCTAGAACCTAGAAGAGAGA TACTAATGAATGAGCATGTCATAGGTTACATCTTACATGATACTTGAAGTTGAAGTTGAAGGGGATTATCACTTATGGAT TAAGGCCCGTTTGGGAGAGCTTATTTGATAGCATAAGCGCTTGTGCAAGTGTTTAGGAGAGTCTATCATAAGTTGTTTTG AGCTTTTTTCATAAGCTACTCAGGATAGCTTATGAAAAAGAACTTATGCTTATATATAGCTTATTTTCAACTTGTTTCAA TAAACTTTTTAAAATAGCTTATGAATAAGTGCTTATGGTCTTATGTCATAAGCACGACCATAAGCACTTAATTGAGTTGT TTTCCCAAACGGGGCCTCATTAATTTCAGAACTGAAATTGGAATTTAGATTTCATATGTTGTGTGTCACCAATTATTGGA TTTACCAAATTTATTTTTCCTCACCTCTAATGCCAGATGTGTTATTTTTTCAATCAGATATCCTGATGATCGGTTTGACC GTATCTGGGAGCCATTAGGCCAGAGTAATTCAACCAAAGCAAGCACTGCCAATGTTTCTGTTTCTGATTTTTGGAACCTT CCACCTTCAAAAGTATTTGAGACACATCTAGGGTCTGACCAATTGGAGGAATTGCAAATGAGATGGCCTGCAGTATCACT TCCAAGCTCCAAATACTATGTCGCTTTATACTTTGCTGACAACACTGGCGGATCAAGGATTTTTAACGTAAGTGTAAACG GTGTAACTTATTACCGCAATTTGAATGCGATCCCATCAGGTGTTGTTGTCTTTGCCAACCAGTGGCCTCTTTCTGGTCAT ACAACAGTAACTTTAACCCCTGCTGCTAGCTCATCATTGGGCCCCTTGATCAATGCTGGTGAAATATTTGATGTGCGGTC ACTTGGAGGAACAACTTCGATCCGAGATGGTATAGCTTTTGATTTCATGTTTCTTTGCTTAACTCTGGGTCATTTGTAAA ATAATCTTATGGCCAAGACACTACATTCATAGCCAACCAGAAAATTGGTGTTTCTGAGCACGTGAAAGAGAGGAAATGTT CCTCCAGCGGCCAGTGCTGCCTGGAAATATATGTCTAAGATCTATTCTGCCACTCATCAATGTTGAAATTTTTTCTAGAG AGAAGTTGAAGAAAAACAGAAATAGGATATTGTTAAAGGATAAAGGGAGTAATTGAAGATAAACATAGTTATAGGTTTTA AATTGTCACTAATATCATTTTATACTTATATGTTTGCACTAGCTGAGTGAGAAGATTATGAATTTGGACAAATTTGTGGT GAGAACTGAGAAGTGCAAGGTATACTATTACTTGTCAACATTGCCATAACATGTTGACCTACGTTAAGTTTTCCTTCCCA GGTATCAGAGAAATTTTCAAATTTTCTTTGTTTTGGTTTTCAAAGAGAAGGAGAGCCTTGCGGCAACGGTTAGAGTTGCT ACAGTGTGAGTTAGGTCATAGGTTGAGTTACATCAGGTTGCCCCTTTTGGCTTATTGGCAATGGTTGTTTGGCAATTCTT TATTTCAAATCCCAATCTTGTTCTAGTGTGCTTGTATGATGTTAATTGTGAACACGCAAGGTTTTAAAAGGGGACTTTCT CTTGACAGTTATTGCTTTGGTAAAAGTAAAGGAGAGCCTCCGGAATCCTCCACTTGATTGGAGTGGTGATCCTTGTATGC CTCGGCAGTACTCATGGACTGGTATCACATGCTCTGAAGGACCCCGGATCCGTGTAGTGACTTTGTAAGCTCAGATTTGA GTTATTATAGCATAATACTTTCACCGCTAAGTCTTATTGTGCTGCATTAATGATCACTTATGATTCCATGTTGTTTGCAG AAACTTGACAAATATGAATCTTTCAGGATCTTTATCACCTTTTGTTGCCAATATGACTGCCCTGGCAAACATGTAGGTTC TAAGTTTAAATGTATCAGTTCATGATATTTAGCATTCAATTTATTTTTTATCGGCTAACCTTTTCCTTTTGCAGCTGGCT TGGGAATAACAGTTTGTCAGGACAGATACCTGAACTCAGTTCACTAACGTTGTTGGAGACATTGTAAGTTTTGCATGTGT TTTATATGATGGTTTACATTTTAGCATATGATTAATCACATTGATGGCTGTAGCTAGTCTATAATTTTTCATTCATTGAA AACAAATATTTTATTTACTAGTTCTTTGTATCCTGAAGTAACTCGTACAATTGTGTTCGAAAGCAATATGCACAATTCAA ATGTTTGAAATCTGAGAGTTCTTCAATCATCAATGTATTCATGGAGCTCAATATTTGCATATTGTCATTTTGTATTTTAA GGCACTTGGAAGACAATCAATTCACTGGAGAGATTCCCTCATCCTTAGGGAACATCAGCACCTTACATGAAGTGTAAGTT CTACCCCCTAAGATATACTAGAGGTTACAAGCAAAGCTTTTCCTTTTGCTATTTCAGTGTGTAAAATTTTTCCTGACCCC CCCCCCCTCCAAAAAAAATTCATCTTAACTAATTCCCAAATACTGATAATTTCCATTATCTCTGGAAAATCAACTGGGCC CAAACAAAATTTTGGCCCACTTACTATCTTTTCATATTTGGTTACAATTACAATACATTAGGGAGCATCAGAACGGAAAT TTATTGATAGCTAAATGCATTTTGGCTTTGGCCTAATCCATAAGTATTCTGAGGAAACTTGGTGGATTATGTGTATATTG AAGAAATAAGAAACTTGATTGTTCAGTTGTTGCATACTTTTATCCAATCAATGCAAGAAATTTGTTCATCAGAAATTTAC AAATAGGAAAAATCTAGTTACTTTGATAGTAATGTAGCTCATACATGTCTTTTATTTTTAAATTATGTATCCTTCGAATC TTGGGTGCCACCCCCTCTTAAGGAAGTTCTGTCAGTTAATTTGTCATTTCATGTTGTTTTCCCCCACCTAGTGGGAAAAG GCTTGGATATTAATGTTGTTTATCTTCTTTGCTGTTTCATGTTACCTAATTTGCTCTCTCTGGTTGTTGCAGATTTTTAC AAAATAACAATTTGACCGGTCAAATTCCAGCAAATCTCATTGGAAAACCAGGACTGAGTCTCAGGTAAATAAGAACACCT TTACACTCATGTCAATGAGTTATACAATTGTTGCTTTGCTGACTTTTGCATCCTTATTAACAGCACTTCCGGAAATAATT TCTTATCACCTCCTGCACCTTGAGGGATTTTCCATATTTGGGGTGAAGACTTTCCCTTTGTCAAGAAATTTTCATTCTTT TTGTGCTGATTTTGGTGGAAATTTTCATTATCAACTCGTCAACAGAAGATCAAACTTCATTTCAGCATTCTCTTGCTGGA GAACATGCAGATTTATTGTTTTAACTTGGAGCGTACTTTCAGATTGGTTGAAAATATTCTTTCAAGTTTGACTCTCAGTT CCTTGAAAGATGGAATGTTGGTTGAACTTGTATATTATATATATCCTTGTATAGGCATCCTTTATTATTATGTTTGGATA AATTTAGAAGTCAATTCATGTCCGTTTTGTGAGTTCCAAGTTAGTTTTAACATTTTACCAAACATGCACACATGCTCTGT TTCTAGTGTAGTTATGTCATGTGTGTGTATCAGCTGTTTTTCATGTTTACTGTGAATCAAATTATTAACTTCCTATGTAA TGAAGATTGAAATGAAATGCAATAAGGTACAACCGAATAGAATAAAATAGAACACTTCAAAATAATGTTATATATTACGG AAGACTACTCAAGTTTATGAAAGGAAAATTAGAAGACACTAGTAATAGTTGTAGTTAAAAAATAGTTAGGGCCAATTAGA ATAAATGTATAGTTAGAGTTAGTTAAGACCCGTTCTCCCTAAACTCTGGGGGTCCTAAACTTATAGACAAGAGTCCAAGC ATAGGGCCTAGGATTAGTGTTAGAGTGAAGTTGGTTCTTCTCTGGCTCTGTGACTTCTTTTATAGACCTCTTCCTTGCCT CTTGGACTGTTGAGGTTGTGTTTATAATCTTTGTCTCATTGAGTAACAGTAGCTGCTACCATTAATTATTGGGCGGTTAT GACCGGCTACTTATTAGGCTTTTGGGATCTGAAGGTTCTTCATTAATGTGTCGTTATATTTTATCATTATGCCTTTAACC CGTGAAGATGAATGATTAAGGATGGAGTATGACCTTTCATGTTCAAGTAACCTCGTTAAGATTGTCTTTTGCCTCGAGTG AATGTGGTCTTGCTACCTCCCCCGTAACAGCCCAATCGATGCTTCGAAAAAGGCCACATTTTAAATTCAAAGCTTTCGAG AGCAACTTGGAGAACCTTGAATCACATTTTAAATTACTGATATATTAGTTATAG
CDS sequence (LotjaGi5g1v0316100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCCTCATCTTCCTCCTCCTCTTCTCACCCTTCTCCCTCTCCCTCTCCCAAACCCCACCACCACCACCCAGAGGTTT CCTCATCAACTGTGGGGCCCCCTCCGCGACCCAAATCGACGGCCGTTCATGGCTTTCCGATTCCGGATTCATCTCCACCG GAACACCCAAAAACGTGACCTCCCCTGTTCTGATCCCCACTCTCAAAACCCTCCGATCCTTCCCTTTAAACATCAAGAAG CACTGCTACAATAATATTCACGTGTTTCGCGGCTCAAAGTACCTGGTGCGGTCTACGTATTTCTACGGCGGAGTCAACGG CCCCGATCACCCTTCGCCGCCGGTGTTTGACCAGATCGTCGATGGGACCTTGTGGACTGTGGTCAACACGACTGCGGATT ATGTCAACGGGAACTCTACGTTCTATGAAGGGGTTTTCTTAGCTAAGGGGAAGTTCATGACCTTCTGTATCGGCTCGAAC AATCGCACCGAATCTGACCCGTTTATCTCTTCTTTGGAGTTTTTGATTCTCGGTGATTCCCTCTACAACACCACCGATTT CAACAATTTTTCCATGACCTTGGTTGCCAGGAACAGTTTTGGCTACTCTGGATTACCCATTCGATATCCTGATGATCGGT TTGACCGTATCTGGGAGCCATTAGGCCAGAGTAATTCAACCAAAGCAAGCACTGCCAATGTTTCTGTTTCTGATTTTTGG AACCTTCCACCTTCAAAAGTATTTGAGACACATCTAGGGTCTGACCAATTGGAGGAATTGCAAATGAGATGGCCTGCAGT ATCACTTCCAAGCTCCAAATACTATGTCGCTTTATACTTTGCTGACAACACTGGCGGATCAAGGATTTTTAACGTAAGTG TAAACGGTGTAACTTATTACCGCAATTTGAATGCGATCCCATCAGGTGTTGTTGTCTTTGCCAACCAGTGGCCTCTTTCT GGTCATACAACAGTAACTTTAACCCCTGCTGCTAGCTCATCATTGGGCCCCTTGATCAATGCTGGTGAAATATTTGATGT GCGGTCACTTGGAGGAACAACTTCGATCCGAGATGTTATTGCTTTGGTAAAAGTAAAGGAGAGCCTCCGGAATCCTCCAC TTGATTGGAGTGGTGATCCTTGTATGCCTCGGCAGTACTCATGGACTGGTATCACATGCTCTGAAGGACCCCGGATCCGT GTAGTGACTTTAAACTTGACAAATATGAATCTTTCAGGATCTTTATCACCTTTTGTTGCCAATATGACTGCCCTGGCAAA CATCTGGCTTGGGAATAACAGTTTGTCAGGACAGATACCTGAACTCAGTTCACTAACGTTGTTGGAGACATTGCACTTGG AAGACAATCAATTCACTGGAGAGATTCCCTCATCCTTAGGGAACATCAGCACCTTACATGAAGTATTTTTACAAAATAAC AATTTGACCGGTCAAATTCCAGCAAATCTCATTGGAAAACCAGGACTGAGTCTCAGCACTTCCGGAAATAATTTCTTATC ACCTCCTGCACCTTGA
Protein sequence (LotjaGi5g1v0316100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLIFLLLFSPFSLSLSQTPPPPPRGFLINCGAPSATQIDGRSWLSDSGFISTGTPKNVTSPVLIPTLKTLRSFPLNIKK HCYNNIHVFRGSKYLVRSTYFYGGVNGPDHPSPPVFDQIVDGTLWTVVNTTADYVNGNSTFYEGVFLAKGKFMTFCIGSN NRTESDPFISSLEFLILGDSLYNTTDFNNFSMTLVARNSFGYSGLPIRYPDDRFDRIWEPLGQSNSTKASTANVSVSDFW NLPPSKVFETHLGSDQLEELQMRWPAVSLPSSKYYVALYFADNTGGSRIFNVSVNGVTYYRNLNAIPSGVVVFANQWPLS GHTTVTLTPAASSSLGPLINAGEIFDVRSLGGTTSIRDVIALVKVKESLRNPPLDWSGDPCMPRQYSWTGITCSEGPRIR VVTLNLTNMNLSGSLSPFVANMTALANIWLGNNSLSGQIPELSSLTLLETLHLEDNQFTGEIPSSLGNISTLHEVFLQNN NLTGQIPANLIGKPGLSLSTSGNNFLSPPAP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 17 | 17 | - | – | |
| Phobius | 1 | 17 | 17 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 17 | 17 | - | – | |
| SignalP_EUK | 1 | 17 | 17 | - | – | |
| Phobius | 3 | 12 | 10 | - | – | |
| Phobius | 13 | 17 | 5 | - | – | |
| Phobius | 18 | 511 | 494 | - | – | |
| PANTHER | 19 | 509 | 491 | 8.1E-225 | – | |
| PANTHER | 19 | 509 | 491 | 8.1E-225 | – | |
| Pfam | 29 | 347 | 319 | 1.2E-62 | ||
| Gene3D | 354 | 511 | 158 | 1.8E-32 | ||
| SUPERFAMILY | 356 | 505 | 150 | 1.51E-23 | – | |
| Pfam | 358 | 394 | 37 | 5.8E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0316100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…