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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0319000 |
| Transcript ID | LotjaGi5g1v0319000.3 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT4G23180.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 10; Swiss-Prot: sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10; TrEMBL-Plants: tr|V7BBH0|V7BBH0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0319000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:63649595..63651968) extracted from Lotus japonicus Gifu genome v1.2.
GGTAAAATTGTGAACAGCTGACAAATAGCTACGAATTCTAATTTGGTGCAGGAAAGAGCAACAAAGCAAGAACTGTCATC GATCGCCATAACAGTGCCAGTTGTTATTATTGTTCTGGTGGTGCTCAGTTTTATTTGCATCTGTTCAATACTCAGAAAGC GAAGAATTATGTTTCCATGTAAGTCAAGTCTAACTGCTCTAAGATTGATTTATCGTCACTTGTTTGTTATCCACTATGCA GCATGATGACAAAACTTTTAATATTATTTCTATATTTAACAAAACATTAGTTATTTCCTTTTGGTTTCATATTAGTTTAG AAATTATATATATCTCTAAATTGTTCTGTTTCTAGTGCATTTATCTTATCTCTGACTAGTTTAACCCGATTTCACATGTG AAAGTTAAAAACGGACAAGATCATGATGAAGATGAAATCACTATTGCTGAGTCATTGAAATTCAATTTTGACACCATACG AGTTGCTACTAATGACTTCTCTGATTCTAATAAACTTGGAGAAGGCGGATTTGGAGCTGTTTACTGGGTAAGATAACAAT TGTTTCATTCATAAAAATGTCAACTCCTATTCAAATTTATACCATTATAACTTGGCCAATAAAGAATTCATAGCCCATAC CAGTGTTATATTTTCAGGGTGAGTTATCGAATGGGCAAGTTATTGCTGTCAAAAGGTTATCATGGAATTCTAACCAAGGA GATACAGAATTTAAAAATGAAGTGCTTTTAGTGGCCAAACTTCAACACCGCAATTTAGTTAGGCTACTTGGTTTCAGTAT GGAAGGGAGAGAAAGACTACTTGTCTATGAATTTGTTCCTAATAAAAGCCTTGACTACTTCATATTTGGTAGGTCTCAAG ATCAACACAAAATGATTGTTACTGTATTGCTTACAGTTCAGGTTCAAGAAAAAGACTAATTAAGTACTAATTAACATAGT TCTAAAATTCATATGCCTTTGTTGTATATATGTAGATCCTATCAGGAAAGCGCAACTGGTTGGTGAAATGCGCTATAACA TCATTAGGGGTATTGCTCGAGGCCTTCTTTACCTGCATGAAGATTCTCGACTGCGCATAATTCACCGTGATCTAAAAGCA AGCAATATTCTCTTGGATGAAGAGATGAATCCTAAGATAGCAGATTTTGGCATGGCAAGATTGTTTGTTATGGATCAAAC TCAAGAAAATACAAGTAGAATCGTCGGAACCTAGTAAGTAAAGCAATGTGCTTGAGTATGCTAATTGTTATTTAAGAGCT TAATTTGAATTGAGTTAATTTTTTGCATTGTTACTCAATCATGTATTGATAAACTAGACAAAGACTTTGATGCTTTAAGT AGTTGTTATGAGAGTCAAACTCTTTTAAAACTGGCTTAATGTAAAAGTGGTAGTAATACTTTAACCCTGATATGAAATCA TAACTAGAACTTTGTTATATATAAATACCATTGACCATACATATCAACTGAAATGATGAAGATTTTACTACTGTGAAAGG AGATATGATTTTTGTTAACTAATTAAGCACGTTCATATTCGCACGCAGTGGATATATGGCGCCTGAGTATGCAATGCATG GACATTTTTCAATGAAATCTGATGTCTTCAGTTTTGGAGTAATAGTCCTTGAAATTGTAAGTGGCCTGAAAAACAATAAG GGCATTAATCATGGTGAGGATGTGGAATATCTACTGAGCTTTGTAAGTCTTATATTTCTCATTATTATTACTTTCTTGCC ATTAAAAGCTATTAAAAGATTACATGCTCCTAAACATTATTGTAGAAGTTGACTCAGTGGCCCAACAGTACCTGGTTATC TAAAATTTAGCAAATTCTTACAGGCATGGAGAAACTGGAGGGAGGGGACTGCTACAAAAGTTATAGATCCATCATTAAAC AACATTTCACCAAATGAGATGATGAGATGTATCCACATCGGTTTACTCTGTGTTCAAGAAAATTCAGCTAATAGACCAAC CATGTCTAACGTTGTACTGATGCTTAATAGTAATTCTGTAACTCTCCCAGTACCTTCAAAACCTGCATTTTTCATGGACA ATTCAACTAGAATCCTTACAGACATGCAGTTGTTGGAAGATAACTCACGGGCAACAAGATCAAGTCAATCCACGAGTAAA TCAGCTCAAGGATCTGTAAATGACGTTTCAATTACTGAGTTATCCGCTCGCTAGATTCTAGTCATAGGAGGGTGATATCA TAATTTATCATCGATGTTTTTATCACTACTCCATGCCTTACAACCTGTAATTGTAATTTGCAAGTACTCTAGTTTACATA GGCCATAAATCGTATTTGTATACACCTGGATAAAATCTGTAATATAAAACTTTA
CDS sequence (LotjaGi5g1v0319000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTCCATGCGGATTTGGAGCTGTTTACTGGGGTGAGTTATCGAATGGGCAAGTTATTGCTGTCAAAAGGTTATCATG GAATTCTAACCAAGGAGATACAGAATTTAAAAATGAAGTGCTTTTAGTGGCCAAACTTCAACACCGCAATTTAGTTAGGC TACTTGGTTTCAGTATGGAAGGGAGAGAAAGACTACTTGTCTATGAATTTGTTCCTAATAAAAGCCTTGACTACTTCATA TTTGATCCTATCAGGAAAGCGCAACTGGTTGGTGAAATGCGCTATAACATCATTAGGGGTATTGCTCGAGGCCTTCTTTA CCTGCATGAAGATTCTCGACTGCGCATAATTCACCGTGATCTAAAAGCAAGCAATATTCTCTTGGATGAAGAGATGAATC CTAAGATAGCAGATTTTGGCATGGCAAGATTGTTTGTTATGGATCAAACTCAAGAAAATACAAGTAGAATCGTCGGAACC TATGGATATATGGCGCCTGAGTATGCAATGCATGGACATTTTTCAATGAAATCTGATGTCTTCAGTTTTGGAGTAATAGT CCTTGAAATTGTAAGTGGCCTGAAAAACAATAAGGGCATTAATCATGGTGAGGATGTGGAATATCTACTGAGCTTTGCAT GGAGAAACTGGAGGGAGGGGACTGCTACAAAAGTTATAGATCCATCATTAAACAACATTTCACCAAATGAGATGATGAGA TGTATCCACATCGGTTTACTCTGTGTTCAAGAAAATTCAGCTAATAGACCAACCATGTCTAACGTTGTACTGATGCTTAA TAGTAATTCTGTAACTCTCCCAGTACCTTCAAAACCTGCATTTTTCATGGACAATTCAACTAGAATCCTTACAGACATGC AGTTGTTGGAAGATAACTCACGGGCAACAAGATCAAGTCAATCCACGAGTAAATCAGCTCAAGGATCTGTAAATGACGTT TCAATTACTGAGTTATCCGCTCGCTAG
Protein sequence (LotjaGi5g1v0319000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFPCGFGAVYWGELSNGQVIAVKRLSWNSNQGDTEFKNEVLLVAKLQHRNLVRLLGFSMEGRERLLVYEFVPNKSLDYFI FDPIRKAQLVGEMRYNIIRGIARGLLYLHEDSRLRIIHRDLKASNILLDEEMNPKIADFGMARLFVMDQTQENTSRIVGT YGYMAPEYAMHGHFSMKSDVFSFGVIVLEIVSGLKNNKGINHGEDVEYLLSFAWRNWREGTATKVIDPSLNNISPNEMMR CIHIGLLCVQENSANRPTMSNVVLMLNSNSVTLPVPSKPAFFMDNSTRILTDMQLLEDNSRATRSSQSTSKSAQGSVNDV SITELSAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 273 | 273 | 33.799 | ||
| Gene3D | 3 | 70 | 68 | 2.0E-24 | – | |
| SMART | 5 | 266 | 262 | 2.9E-15 | ||
| SUPERFAMILY | 5 | 296 | 292 | 1.27E-72 | ||
| PANTHER | 5 | 302 | 298 | 3.4E-128 | – | |
| CDD | 5 | 267 | 263 | 7.23688E-91 | – | |
| PANTHER | 5 | 302 | 298 | 3.4E-128 | – | |
| Pfam | 6 | 264 | 259 | 2.7E-41 | ||
| Gene3D | 71 | 273 | 203 | 1.4E-57 | – | |
| ProSitePatterns | 116 | 128 | 13 | - | ||
| MobiDBLite | 299 | 328 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0319000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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