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LotjaGi5g1v0332400.4

Overview

Field Value
Gene ID LotjaGi5g1v0332400
Transcript ID LotjaGi5g1v0332400.4
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description ALG-2 interacting protein X; TAIR: AT1G15130.1 Endosomal targeting BRO1-like domain-containing protein; Swiss-Prot: sp|Q8T7K0|ALIX_DICDI ALG-2 interacting protein X; TrEMBL-Plants: tr|I1LEN7|I1LEN7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0332400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:64959299..64966192) extracted from Lotus japonicus Gifu genome v1.2.

TCGACGTCGTCCTCCGCCGCGGGCAGCACCAATATCATGCTCGCGATCTTCGAGAAGAAGGCGAACACGGTGGATCTCTA CCGCCCCCTCCGCAACTACGTCGCCTTCCACTACTCCGAGCGCGAGGCCCAAAACATCGAAGACGATCTCCAAACCCTAA AGCAGCTCCGCTCCGACCTCGACCGCAACCCCGATCCCTCCCTCCCTTCCCGCCGCGACCTCCTCCAGAACTACTTCAAG GCTCTCTGCCAGGTCGAGACCCGTTTCCCCATCTCACCCGACCCGGACCATGTCAACTCCCTCACCTTCGTCTGGTTCGA TGCCTTCAAGCCCAAACTGAAAGCCTCTCAGCAGAACATCCACCTCGAGAAGGCCTCCGTTCTGTTTAACCTCGGCGCCG TCTACAGCCAGATTGGTTTATCTTACGACCGCAACTCCGTCGATGGCCGCCGGCAGGCTTCCCACGCCTTCATCGCTGCA GCCGGATCCTTCGCTTTTCTACGGGACAATGCCTCCATGAAGGCCTCCATCGGGAACTCCACCACCGTCGATTTGTCCGT CGAGTGCGCTGGAATGTTGGAGAAGCTCATGCTCGCTCAGGCTCAGGAGTGTGTCTTCGAAAACACCATTGCTAAAGGGA GCACCCCTGGTGTTTGTGCCAAGATCTCTAGACAGGTTAATCCGAATTTATTTGCAAATTGTTTGTTTGTCTTTCTGATT GTTCCACATGGATTGTTTTGTTTCGCGGCTAATTGTTTTGACTCTACGGTTAGGTTGGACTGTATTATGAGGAAGCATTG GCCGCGCTCAATGTTGCGCCTTTAAGCCAGCATTTTGACAAGTCATGGATAGTTCATGTGCAGTTAAAGTCAGCTCTATT TTATTCAGAAGCTTGTTACAGATGTGGATTGGAACTGCATGAAAAAGAGGAGATAGCGGAGGAGATTGCTAGATTAAGGA GTGCGGTTAGTGTTCTTACCGAAATTAAGAAAAGCTCAAAGGGTGCTGCGGTTCAGATTCTGGATGCGATTAGCAAGTTG GAGGTCAATATTAACCGGAACTTGGAAAGGGCTGTCAAGGAGAATGATAGAGTTTACCTCATGAGAGTTCCTTCTCCCAG TTCGTTGTCACCACTTCCAGCATTTTCTATGGTGAAACCTATGCCGATGAACGAGGTGTTGGATGCGAGCAAAGAGAAGA TGTTTGCAAGTCTTGTCCCTGACAACAGTGCAAAGGCTCTCTCTAGGTACACCGAGATGGTGGATGATATTATAAGAACA CAAGCTGAGAAGTTACAGCAAGCTAGTGAGCTAACCCGAGTTAGGCTTAAGGAAATGGAGCTGCCAGATTCTATTCTTGC TTTGGAAGGAAATTTTACTCTACCAACAAATCTCAAAGAAGATGTCGAGGCTGTGCAGATCAGTGGGGGCCCTGCTGGTT TGGAATCAGAGCTGCAGCAACTTAAGGATCTGAGGAGGGTGAATCAAGAATTGTTGGTTCAGACTGAGGAGTTATTGCAG AAGGAAGCAAGAGAAGATGCTCAGTTTAGAAGCCAATTTGGAACAAAGTGGACTAGGCCTCAATCAAGCACTTTGACAAA GAACTTGCAGGATAGACTCAACAGGTTTGCGGGTAACCTGAAACAAGCTGCAGAAAGTGATTCTAGGATTGAGCGTTCAG TTAGAGAACATTCGGCTCTCATGGCAATCCTGGATGCCCGTCCGGTAAATTGTTATAGTATTTGTTGTGTCTTATGACAT ATTTGGTTCTTGGTTTGGTAGTAGTTAAATTCATTGAGTCTGTTTTGCCTTTCATTAGATTGAATCAGCACTCCCGAGCT TGGCAAGGCCAATTATGTCTTTTGATCAAAATGAAGATGCTGTCGTGGGGTCTCTCAAGCAAAGCTTGGTAAGTTGTTTT TGGCTTGTTAGTATTATATGTTGACTTTCAGGGGAAAATCTATTACATTTCTTGAAATCATAATTACTTGCTATTTATTG TTGTACGATGTATGTATTAATTCCAGATATAAATTTAGTGAAGAATAATTCTGTTGTGGTATATTTTGAAATATTATGTT TCAAAACTAGTTGGGGTGAAGATCTTATAGCAATTTCTATGATCCTAATTTCCCTTCTATAAATTGTGATTGACTGATTA TAAATTTCACCAATCAACTAAGCTTTGAATGTTTTCTTCTTAACTACACTCTTTATTAACACTAACATAGCTTATAAAAG TTAAGAAATTTCTGGGCAAATTTGAAATTTGAACTGGAATGGAGTATTGAATATAGCTAGCAACCGAAAGACTTTTGAAT ATACATCTTGAATATTTTAGTAATCTTTGATTTCTATTGAATTTTTATGCTCATTGATATAGAGACAACTAGAGACTCTT GGAGCTCAAAGGGCTGGTCTTGAAGACATGTTGAAAGAGATGAAAAGAAAGGTATGCCTGATAAGCATGATTCACGTAAT TACATTTTTGCTTGTTCTGCAAAAGCTAAATTTTCCTGTCTTGTTATCTGAAGACATGAAATATGCCTGTGCCTTCACTG CAAATTTAAGCCATCATTTGCTCTCAAAATGCTGGTTTTCTGGCAACAGTCTATGATATCAAAGTGATATAACAAATACA AAGTCTCATCCTGCTATTTGCATATAGTATGCATGCTGTCTTTTGTCTCAACTATGAATGCCTTTTGTCCAGTATGTATT TCTGTAGTGTAAATAGGAATTAAACATGTGTAACATTCAAAAGAATACTAACCTATTCCATCTCCTGGAATGCTGACTGC ACAAATAGAAACGAAAGGAATGGGAAATATTTTCTGACTGTAAATGATTATGGAGAGCATGCGTACCTTTTGTTAATCCA ACTTTACATATACACGAAGTTTAGCTCTGTCTTGGAAGAAGCATTATTTTACTTATGAAGTGATTTTGTGATGAAATTTA GGTGCATACCAGGATATAATTGTAATAAATCGTCGATTTTTTTTCTTTTACCTTGTGCACCCAATGCAAATTATGTTCAT GTGATGAGTGCTGAAGGAAAATATATTAAATGAAGTATATGATAGTTTTGTGTATATTGGAGACTTACATTTTTGATTTT TGACCTTATGCCTCTCAAGCTGTTATATGATACAAAAAATCAGTATTTGATACAGTATGATATATATAAACACCAAACTT TTTGGGGAAACATTAAGTTATGGGTGGTGTAATGGTGTTAAAAAATTATAAAAAATATATGTATGTTATTGGCACACCCA TAAAAAATGAGTAGATGAAATAAAAATTATCCATCTATTAAAATTTAAAATGTATCCACCCTTTATATATATATATATAT ATATATATATATATATATATATATATATATATATATATATATATGTCATTGGTGTAATGGTGTTAAAAAGTTCTCTATGT CCTTGTTGTCTGCCCCCTTGCTCTGAAGTCTGAACCCAGTCCCTGTCTACTGATAATTGGATACGTCAATTTTGGTGTAT CCATGCATCATAGCTCCCAGGTGTGAAGACTATATTTTCAGTATCCTTGCCTACACGATTTATCATTCATAAAGTCCTTC CTTCTTATATTGAGTAATTTAAACATGAAGTTTTTTACCTGATGTGTAACTGGGGTTCTATCATTTGAATACAAGATTAT CTACAGATAATGTGAAATTAAGACTGAACTGCAATTATGAATGATAAAGCAAGAGTATACAGAAAATTTCTATGTAGATT TTGCATTTCTTTTAACTTGTTGTGAAAGGTGAATTAGTGGTCTGGATTTTGTTTTCTTCATTTAGAGGTTTCTAATGCTC TGAATACAAAAAATTGACGAGAGTTTGCTTCTCCTATGTAGTTTCCCATTCGTAAAATTGTTATGTACTAAAATCATCTT GGCTTATATTTCGTAAATATCTTCAGGATGATATATTACCCAAGTTGATGACATCCACCGGTTCTTATGAGGACCTTTTC AAGAAGGAGGTAGCAAAATATGACCATATTTGTGAAGATATAGCTCAAAATATTGAGGCTCAAGAGCAGTTGTTGCTGCA GATCCAGGTGATAGAACTAGTACATTAAGAAAAGAAAGATGTCCCCAACCATCTAGTAGATTTGTTTTTTTTTTTTTTGG ACTACCTTTTCTCAAACAATGGTCATTCACATTGGACCATACTCTTGAGATCCTTGATTAATAATGCGACCTCACCTGAC CACATTTTATAACAGCAAATGCAAACTTCCAATTTTTATATTCCATGCTTCGGAGAGAGAAAAACTAATACCTGTAAAGA CAAAAATGATAAATTATATTTCTATTAAATTAACCATTTTAGATCTTTTCAGTCATATGATTCTGATATATTGTTTGCCA TTGTTCTCAGGCTCAAAATGATGATTTTTCTGCTATCTTCAATCTTGAAGACTACAAAGGTGGGCCTCAATTGGTTGATC TCTTCTAGATTGAATCTAGTTTCTATATTTATCATCATGCTGACAATGTCAAGTTTGTTTTTTATGTCTACAAATATACT TAAAAGATTCATTGTTCTAATTTTTCGTGTTTCATGCTAAATGCTCCATTTTTATTAGTAGTTTTTTTACATTGTCATCA TTGATTTTTTATGTATTCCTTGTAAATATCCCAGCTTCACGTGAAAAGTCCTACAAGCAGATTGAAGCTGCCATAGCCAA GTTTCGAGAAATAAAGGACAACATCAATGAAGGGTTAAAATTCTATGTTACTCTACAGGTAAGAACTTTTCAACTATGTC TTGATTGAATTCTATTATGTAAGAACTTACCTTTTCTATTAATTGAATTTTCCCCAAAACTAAGCATGTTATCTACAACA ACAACCATCAAACATTTTCCCGGGTTGGGTACATGAACTTAACTTCATAATGCTCCATCATATATCATGTTCTTTAGTTT CATTCGAATCTCACTTAATGGTTTGGTCTTTAGTTTTTCTTGGTCTTCATGTACATCTAACTATTGAGCTTACATTCATG CGATCAATCCTCCTTACCAGTACTTTTACAGGTGGGGTTGACTACATGATTTATACTTCATAATACTCCATCATATATCA AGTTAGATAGAATATTTACCTTCGTATCTCACATGATGGTTTGATCTATAGTTTTTCTCGGTCTTCATCTACATGTAACT ACTGAACCATCCTTCATGCGATTAATCCTTCTTACCAGTACTGTTACGAGTGTTATACACACATCTCTAAATCACCTAAA ACAAGTCTACCATCTTTCCTACAATTAGAGCTACCACGACTTTCTCTCAAATGATTATAATCCTATCCTTGTCTTCTATA GCCATTTATCTGTTGTAACATTCCCCTTGCGGCGATATTAAGCTTACTCTCTTGTTGGCTTTTTATCGCCCAACATTCAG TCCTATAGCATTGTTGGTCTTATTGAGTTTATGGTTAGTTAGTAGAATGGTTAGTTTAAAGAAGTTGCAAATTAAACGAG GTTAGGCTATAAATATGAGGGAGAAGGATTAGGGAGGTATCTTGTTTGTAATAAGGGAATCCTAAGGAGAGTGTTGGTTA TCTCAAACAACTTGTAGTTCATTGCTTTTCTTGCATATTAATCAATCTTGCTTCTCATTCTTTGCAACCTATCAGAAAAT ATTTTCATTAAAAGAATATCTTGAACCAAATCTTCTAAGTTCTCCCAGAACTTTACCTTGTAGTATTCTTCTAACTCTAC TTGTTCTGCATGTACACTAATAACATTAAATGTTTCTCGATCCACTATAAACTCTTGAGCCAGGAACCTATTAGCCAACC TACTAACATCACAACTTCTTTCATCCGATGCTTATTTGCAATTATGAGTACTCCATTTAGAGATTTCATATGTGCAGCAA AGCTTGAATCACGACATTAACCTTTTCTCCTACCCACTTAGTTCTTGTATGCACATAAAATTTATCCTTCTTTCTAATCA TTATAGTCCTGTCGAGGTGCCTGAATTCCTAATTCTAAAATCCAATTCTTTACCCTCACTCATTCACAACAATGCAGGAT GCCTTGCTTATTTTTCACTGCACTCAGCGAGTCTTGTCACTAGACACTGTATTCCAGCGATACAGCACGATGCTTATGGG CACAAACATAGACATGCTAATGTTACTATTGCGTCAAAAAATATTCATCGAAGTTTTGTTCCTTTTTTTTTTGTTCATTA TCATTTGAATGTTATTGGATTATGATGTTTGTAACAAATATTTGTTATTTAATAATATGCAATTTCTTTCGTCAATAGGA TGCAATCACAAATGTAAAGCAGCAGAGCAATGACTTTGTAATGACAAGGAACATCCAGTGCAGGGAAATGATTGAAGATG TTCAGAGACAAGTGGCTGGTTTGAGTTTCCAGGACAAAAACAATGGTGCTTATAACGGCAACTACCCTTCAGTGGGAAAC CAAAACCCAAGATCCAACACACAACAAACAGATCCTTCTCGTCCCCAAACACCTTATTATCAGCCTGATCAAAGATCCGA TACACAAACGAATCCTTCTCGTCCCCAAACACCTTACTACCAGTCTGCTGAGCAGCCACCTGTTCCTGCCTATGGTCATC ACCCTCCCCCATATGGTCATCAGCCTCCACCTCCATACCAAATTCCACCAACATCAGCTGCTCCATACCCTCCCCCCCAG GTCCACCAGCAGCCACCAGCAAGCCATGAGTATGGCCAACCTGCATATCCCGGATGGCGTGGTCCATACTACAATGCACA CGCGCAACAACCTGCTTCTGCTCCTCGGCCTCCATATACCATCCCGTCTCCATATCCTCCGCCTCATCAAAGTGGCTACT ATAAGCAGCAATAG 

CDS sequence (LotjaGi5g1v0332400.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTCGCGATCTTCGAGAAGAAGGCGAACACGGTGGATCTCTACCGCCCCCTCCGCAACTACGTCGCCTTCCACTACTC CGAGCGCGAGGCCCAAAACATCGAAGACGATCTCCAAACCCTAAAGCAGCTCCGCTCCGACCTCGACCGCAACCCCGATC CCTCCCTCCCTTCCCGCCGCGACCTCCTCCAGAACTACTTCAAGGCTCTCTGCCAGGTCGAGACCCGTTTCCCCATCTCA CCCGACCCGGACCATGTCAACTCCCTCACCTTCGTCTGGTTCGATGCCTTCAAGCCCAAACTGAAAGCCTCTCAGCAGAA CATCCACCTCGAGAAGGCCTCCGTTCTGTTTAACCTCGGCGCCGTCTACAGCCAGATTGGTTTATCTTACGACCGCAACT CCGTCGATGGCCGCCGGCAGGCTTCCCACGCCTTCATCGCTGCAGCCGGATCCTTCGCTTTTCTACGGGACAATGCCTCC ATGAAGGCCTCCATCGGGAACTCCACCACCGTCGATTTGTCCGTCGAGTGCGCTGGAATGTTGGAGAAGCTCATGCTCGC TCAGGCTCAGGAGTGTGTCTTCGAAAACACCATTGCTAAAGGGAGCACCCCTGGTGTTTGTGCCAAGATCTCTAGACAGG TTGGACTGTATTATGAGGAAGCATTGGCCGCGCTCAATGTTGCGCCTTTAAGCCAGCATTTTGACAAGTCATGGATAGTT CATGTGCAGTTAAAGTCAGCTCTATTTTATTCAGAAGCTTGTTACAGATGTGGATTGGAACTGCATGAAAAAGAGGAGAT AGCGGAGGAGATTGCTAGATTAAGGAGTGCGGTTAGTGTTCTTACCGAAATTAAGAAAAGCTCAAAGGGTGCTGCGGTTC AGATTCTGGATGCGATTAGCAAGTTGGAGGTCAATATTAACCGGAACTTGGAAAGGGCTGTCAAGGAGAATGATAGAGTT TACCTCATGAGAGTTCCTTCTCCCAGTTCGTTGTCACCACTTCCAGCATTTTCTATGGTGAAACCTATGCCGATGAACGA GGTGTTGGATGCGAGCAAAGAGAAGATGTTTGCAAGTCTTGTCCCTGACAACAGTGCAAAGGCTCTCTCTAGGTACACCG AGATGGTGGATGATATTATAAGAACACAAGCTGAGAAGTTACAGCAAGCTAGTGAGCTAACCCGAGTTAGGCTTAAGGAA ATGGAGCTGCCAGATTCTATTCTTGCTTTGGAAGGAAATTTTACTCTACCAACAAATCTCAAAGAAGATGTCGAGGCTGT GCAGATCAGTGGGGGCCCTGCTGGTTTGGAATCAGAGCTGCAGCAACTTAAGGATCTGAGGAGGGTGAATCAAGAATTGT TGGTTCAGACTGAGGAGTTATTGCAGAAGGAAGCAAGAGAAGATGCTCAGTTTAGAAGCCAATTTGGAACAAAGTGGACT AGGCCTCAATCAAGCACTTTGACAAAGAACTTGCAGGATAGACTCAACAGGTTTGCGGGTAACCTGAAACAAGCTGCAGA AAGTGATTCTAGGATTGAGCGTTCAGTTAGAGAACATTCGGCTCTCATGGCAATCCTGGATGCCCGTCCGATTGAATCAG CACTCCCGAGCTTGGCAAGGCCAATTATGTCTTTTGATCAAAATGAAGATGCTGTCGTGGGGTCTCTCAAGCAAAGCTTG AGACAACTAGAGACTCTTGGAGCTCAAAGGGCTGGTCTTGAAGACATGTTGAAAGAGATGAAAAGAAAGGATGATATATT ACCCAAGTTGATGACATCCACCGGTTCTTATGAGGACCTTTTCAAGAAGGAGGTAGCAAAATATGACCATATTTGTGAAG ATATAGCTCAAAATATTGAGGCTCAAGAGCAGTTGTTGCTGCAGATCCAGGCTCAAAATGATGATTTTTCTGCTATCTTC AATCTTGAAGACTACAAAGCTTCACGTGAAAAGTCCTACAAGCAGATTGAAGCTGCCATAGCCAAGTTTCGAGAAATAAA GGACAACATCAATGAAGGGTTAAAATTCTATGTTACTCTACAGGATGCAATCACAAATGTAAAGCAGCAGAGCAATGACT TTGTAATGACAAGGAACATCCAGTGCAGGGAAATGATTGAAGATGTTCAGAGACAAGTGGCTGGTTTGAGTTTCCAGGAC AAAAACAATGGTGCTTATAACGGCAACTACCCTTCAGTGGGAAACCAAAACCCAAGATCCAACACACAACAAACAGATCC TTCTCGTCCCCAAACACCTTATTATCAGCCTGATTCTGCTGAGCAGCCACCTGTTCCTGCCTATGGTCATCACCCTCCCC CATATGGTCATCAGCCTCCACCTCCATACCAAATTCCACCAACATCAGCTGCTCCATACCCTCCCCCCCAGGTCCACCAG CAGCCACCAGCAAGCCATGAGTATGGCCAACCTGCATATCCCGGATGGCGTGGTCCATACTACAATGCACACGCGCAACA ACCTGCTTCTGCTCCTCGGCCTCCATATACCATCCCGTCTCCATATCCTCCGCCTCATCAAAGTGGCTACTATAAGCAGC AATAG 

Protein sequence (LotjaGi5g1v0332400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLAIFEKKANTVDLYRPLRNYVAFHYSEREAQNIEDDLQTLKQLRSDLDRNPDPSLPSRRDLLQNYFKALCQVETRFPIS PDPDHVNSLTFVWFDAFKPKLKASQQNIHLEKASVLFNLGAVYSQIGLSYDRNSVDGRRQASHAFIAAAGSFAFLRDNAS MKASIGNSTTVDLSVECAGMLEKLMLAQAQECVFENTIAKGSTPGVCAKISRQVGLYYEEALAALNVAPLSQHFDKSWIV HVQLKSALFYSEACYRCGLELHEKEEIAEEIARLRSAVSVLTEIKKSSKGAAVQILDAISKLEVNINRNLERAVKENDRV YLMRVPSPSSLSPLPAFSMVKPMPMNEVLDASKEKMFASLVPDNSAKALSRYTEMVDDIIRTQAEKLQQASELTRVRLKE MELPDSILALEGNFTLPTNLKEDVEAVQISGGPAGLESELQQLKDLRRVNQELLVQTEELLQKEAREDAQFRSQFGTKWT RPQSSTLTKNLQDRLNRFAGNLKQAAESDSRIERSVREHSALMAILDARPIESALPSLARPIMSFDQNEDAVVGSLKQSL RQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYEDLFKKEVAKYDHICEDIAQNIEAQEQLLLQIQAQNDDFSAIF NLEDYKASREKSYKQIEAAIAKFREIKDNINEGLKFYVTLQDAITNVKQQSNDFVMTRNIQCREMIEDVQRQVAGLSFQD KNNGAYNGNYPSVGNQNPRSNTQQTDPSRPQTPYYQPDSAEQPPVPAYGHHPPPYGHQPPPPYQIPPTSAAPYPPPQVHQ QPPASHEYGQPAYPGWRGPYYNAHAQQPASAPRPPYTIPSPYPPPHQSGYYKQQ 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D 1 361 361 2.8E-101
CDD 1 356 356 1.77178E-150
SMART 1 384 384 3.1E-111
Pfam 1 380 380 1.4E-106
ProSiteProfiles 1 394 394 48.597
PANTHER 1 832 832 0.0
PANTHER 1 832 832 0.0
Coils 31 51 21 -
CDD 362 698 337 5.86464E-180
Gene3D 362 640 279 3.1E-69
Gene3D 408 688 281 3.1E-69
Pfam 416 700 285 2.1E-72
Coils 436 463 28 -
Coils 563 583 21 -
Coils 612 632 21 -
MobiDBLite 720 758 39 -
MobiDBLite 720 854 135 -
MobiDBLite 766 801 36 -
MobiDBLite 832 846 15 -
Coils 851 854 4 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0332400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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