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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0366100 |
| Transcript ID | LotjaGi5g1v0366100.2 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT5G13160.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9FE20|PBS1_ARATH Serine/threonine-protein kinase PBS1; TrEMBL-Plants: tr|A0A151U8B2|A0A151U8B2_CAJCA Serine/threonine-protein kinase PBS1; Found in the gene: LotjaGi5g1v0366100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:68086181..68092230) extracted from Lotus japonicus Gifu genome v1.2.
CGTGTTTAAAAAAAAGGCGTGAAATAGAGATATTAGAGGATGGGATCCATTCCCAATTAAAGTCTTGCTCTTGCTCCTGT TTATATTCTATCCATCCAAATCCATCCATACCTCTTCCTTCCTGGTCTTGTTAGTATAACACAACTCAACTAGTTGTAAG CAAGCACAGCACAGCACAAAAGCAAAACCATTTTTTAAAAATAAATCACAGAATCTCTTTGTTTGTTTTAGAATTGGAAG ATGAGCCCTTGATTCCGTGTCTGTGTCTGCGTTTGATTCCGAATGGGTTGTTTTTCGTGTTTCGATTCCAAGGAGGATGA GAAGCTCAATCCTAATCCGACCCACCAAATCCATGATCATAATCATATTTCCAGATTACCCTCTGCCTCTGGTTAGTTCT TTTTTTTTTTTTTTAACTTGTGAAATAAAATAGTATTATATATTTATATCCAATCCAATCTAAGTAAACTCAACTCAACT CAACTCATCTAGTTGATTGATCTGATCTGATGATGATGATGATGATGATGATGATGATGATGATGATGATTATGATTATG ATGATTATGTTGTTGTCGATGTTTGTTAGGTTACAATTCCGATGATGATTATTTACGAGTGTTGAGTGAAATTAATATGA AATCAGATCCTGTATTGTATGTATCTTAGTTGTTGACCATAAGTTACTAATTATTGACGAAGCAATCAGGGATAGGATCA TCTGAATCAAGCAGGCTAGCCTTCACTCATGTCATGACTGCTGCTCCTAATTCATTCAATTCAATTCAATTCAATTCACG GTGATTCATGGTCACGCAGCACAGCTTTGTTTCGTTTAACCTAATTGTGTCTGTCTGTTGTTGTTTTGTATTGCATTGCA TAGCAGGAGTAGACAAGCTACGCCCAACAAGTAATGGAGCCTCCAAAAGGGAATTGCCAGCACCTGGCCTCAAGGACAAA GACAAGGACAAGGACAAGGACAAGGACAAAGACAAGGACAAGGACGGACTTGCAGCTGTCCAAATTGCCGCTCAAACTTT TACTTTCCGTGAACTTGCAGCTGCTACCAAAAACTTCAGACCCCAGTCCTTTATAGGGGAAGGTGGTTTTGGAAGGGTCT ACAAGGGGCGCCTCGAAACCACTGCCCAGGTACGTAAACCTTTCTATCATTTCCTCTTATTTTTTCACTACTCTTCAATA ATATCCAAAAATAGAAAACCAAACAACATGGTGTTTTTCCCCATATTTTCCCTTGCCCTTTTGTATGCTTGTCTCACCAC TGCACTATCTCCATTTTGATTTTTAAAGGACACAATTTGCCTCTCCCCCTTGTTCATAGTTTCACAATATTGTTCTTATC ATCACTGGAAACAGTGGTAAACTAGGAAATAATGGTATGCAACTAATGAAAAATAATAATTGTGGCAGCCCCGAGGAGGA CAATGAACTAATGGATAATAATAATTGTTCATATTTTTTGCTTAATGTTTCCTTCTCTATCTTATATAGTATAACATTTT CTCAACTCACCATGCTCTTGTTTCTGCTTCTCACTCAGTTTGCAACTTCAATGTTTGCCAACTTTTATTCGTAAATTTGT CTTTTGTTTTTGTTTAGAAGATAAATCTTAAGAGTTTTAGTTTGGTTGAGGCTTCCAGTGTCTATTGACTCCTGACAGTT GTTCATTTATCTCTACAGGTTGTTGCTGTTAAACAGTTGGACAGAAATGGTCTCCAGGGTAATCGGGAATTTCTTGTTGA GGTTCTCATGCTTAGTCTTCTACACCACCCTAACCTTGTGAATCTCATTGGATACTGTGCGGATGGAGACCAACGCCTCC TGGTTTATGAATTTATGCCACTGGGATCATTGGAAGACCACCTTCATGGTATGGTTGTGATCTACACCTCTGGATTCTGT GGGAATTTCTTTGTTTTAGTTGAGTTTTTTTTCATACACTAAGAAATGGGATGGGATATTAGTATTCTTCATTAGAAATG TACTGAACCCCAGGATGAGTAGCTAATACATTTAAAAATGAAATTAAAATCTCATCAATATCCCTTATGTCTTTTACAAT ACTAGTATAAGGAGCATGTCACAAGACAAGACATTATCTGAAGTTTCATATTTCTGAGAAAAGACTTAAGGTAAAATGGT ACATTATCTTACATCAATGGTGAAATTATGGTACAGTGTAAATTACCACTATGTATTTTGCAATACTGAAAAACATAATT GAAAGATCCAAAGAAAAAAGCTGTGCTAAGGTTAAATCATGTAGTAGCTGGTGTATTCTAGGACTGACTTTGACTTTCTC TTTTAGAATATCACTTCTTGTCAGTTAGTTGGTTGTGCTTGTTGGAATGCAGGGTAGTCATGGTTAAGATGTTCTTAATC AGCATTTAGAGTGAGCGAGTGTTGTTTGTTTTTCTTACATTCTTGAAGGTGATAAGAAAATTTCCGTCTTGGTAATTTTA ATTATTCCACAACTTTTAGTCTTGAACTTATTATGGTTACAGGCAATTGTCTGTGGGTTTTTTGCTCTTATATAGGAACA CCTATGCAGCTATGCTCATTATGTTATGAGCTTTTAGTTGTTATTTTCTGTGCCTTGCCTCTATGATGTATATGGTTATA GCCAAGTCTCACATAGAAGTAATAAAATTTTGGGCAACAGTACGATACGACATGGCCATGATTCATGTCTTGAGATTGCT GCTTGCTCAACAAATATTCTGTAGCATTGATCAGGATAATTTCATGTGGTTTTCCTCAATCCTCATTATTTTGTGCTTAT TAGTTTCTGTGCCAATAAGAGGCAACTATAAATAAAATTTAAATTTAAATTTTGCTGTTATATAACTTGTTAGCATTTCT ATTTTCATATTCACTCCCCCCCCCCCCCTCTCTCGTCTCAACCATCGTCAACCTGGGTCACTTTCATCTCTCAACTCTCC AGCTCTCTCTGCTATAGACCTTTCTATATCTGCCGGCTCTTGCTCTTCTTTTTTATCTGAAGTAGCAAAACTCTAAACAT TTGGTCTTTGTTTTGGGCCTTCTCGTGAAATACAACCTCTTTGATCTTGGAGTTTTGGGTATACAAGATCTTTGGGTTTA GGGTTCCCTATAAACTTTCCTATTTCCTTTATATTTTCTTCTTTTCATAATCACTATGAAGTATACAATAGATATTGAAT AATATACTTGAATTGTATCATTACACTTTTTATGTTATAGTATATACTTCTTTATATTTTTGGTAGGATCTTATGATTTG TGTTAGGATCCTTTTGATTTACAATCTTTCACTTACCTCCCTCTCAATCCTAAGTAGGAACTTGATTTTGACAACCTTGA TTGTTGTTGTATATTAAGTGAGGCAGCGGTGATCATTGGGGCTAAGCTTTTGGATTAGAGGTAAGACTTTTGATAGAGAA AACTAAATATCAGCTCAGTCTGAATAGAAGTAGGAGGGCCAAAGGCTCCTTCCGAAATTTCATATAAGAATAAAATAAAA AATTTACATTTAAAAAGTTTTAAATGAAAAGTGAAGGATATTTTTTAAATGAGTTAAACCTGTATATATATATATATATA TATATATATATATATGTTTCTTTCGAAGGCCAAGCATGGCCTAATTATATTCAGACCTGGGCGTGAAAGAATTAATTGGA ATTTCTACAGTGAAGATATTTCATTGGTTGTTTTAGCCTTCTGATTTGCCAACTCATTTTACTAGAGATGTATGCAGGGG TGAATAAAGTGTGATATTAAGTGCATTGACAATGTAGGATCTTGAACCTGAACATTAATAGAATTTCTTGGTTGAAAGAA TAAAAAATGGAGGTAACTATTGTGTATTCATTGAAGTCCTTGAAATTGCAATATTGTGGTATTATAAAATAGTGGACTTT AAAAGTCTATACCTAATGACTAATGAAACTTCCAAACCATCAATTTAGCTAGAAGGACGGAGCAATTCATCTTAAACTCC TCAGGGCTCCATTTTTTCTCCTTCAAGAGAGACATAGAGAGAAGAATGAACATGTCACTCTGGAAGATTTATTTATCAAT GATTATGCATATATATGTTATGTAGTGGCTGATGAAATCTAATAATTTTTCCTGAACAAGCCTATTCAATTTAGTGGGGA GCCTAGCCTTTCCATGTTAATTGTCTTAATTCCAATTTACAGAAAAGGAATGCTATACATATTTTAATCATTGTATTGTC TTCTAGAGGTGTTTCCATTTTATCTTGTAATCATATTTGTCTTCTGATGATTGAGGAGTGTCTGTAAACTCTGGGAAGGA TGGAGAATAAACGCTGTGGTTATCACATTACAGTCTTCTTGATCATCATGTTATCTTTTATCTTTGATAACTAATGTTTA ATCATTGTTTATTGACTCGTGTGCAGATCTTCCCCCTGATAAGGAGCCCTTAGATTGGAACACTAGGATGAAAATAGCTG CTGGTGCTGCAAAAGGATTGGAATACCTACATGACAAGGCAAATCCTCCAGTCATTTATAGGGACTTCAAGTCATCTAAT ATATTACTTGAGGAAGGTTTTCATCCAAAGCTTTCTGACTTTGGTCTAGCAAAGCTTGGTCCTGTTGGTGACAAATCACA TGTTTCCACCCGTGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGGCAACTGACAGTGAAGTCTG ATGTATATAGTTTTGGGGTAGTATTTTTGGAGCTGATTACTGGCCGTAAAGCCATTGACAGCACTCTGCCCCATGGAGAA CAAAACCTTGTCACATGGGTAGTCCTCTAATCTTTTCTTTTCATTTTAAGTTAGATTGGCATGCATCAACTTGTGCATAC ATAACAATGGAGCGGTAATGGTGGTTATGTGTGTTTTGAACAGGCACGCCCATTGTTCAATGACCGCAGGAAGTTTCCAA AGTTGGCAGATCCCCGGCTGCAGGGGCGGTATCCCATGCGCGGTCTTTACCAAGCTCTAGCTGTGGCATCAATGTGCATT CAAGAGCAGGCAGCAGCACGTCCTCTGATTGGTGATGTCGTGACGGCACTCTCTTACCTGGCCAATCAGGCTAATGACAT TAACAATGCTGGGCATGATAAAAGGAGCAGAGATGATAAAGGTGGCAGAATATTGAAAAATGATGAAGGTGGAGGATCTG GAAGAAGATGGGATTTGGAAGGATCGGAGAAAGATGACTCCCCACGTGAAACTGCGAGGATATTAAACAGGGATCTTGAT AGGGAACGTGCTGTAGCTGAAGCCAAGATGTGGGGAGAGAACTGGAGGGAAAAAAGACGACAAAGTGTGCAGGGCAGTTT TGATGGTTCTAATGCCTAGTTTCCATTGTGCAAATCCCAGCACCGTCTTTTTATCTTAGTTGCGGCCATGCAATGCAAGG TGGAAATTTTTGGGAGCTTTCTTTTGGCTGATTTAGGGCAAGTCTGGATAACCAATTTGGCCATTTACCGGGTTCTCATT TGTTTACAAAATCTGTCTGCTGGCCATTTCTTGTGGCTGCTACGAAACATAATGAACCTGGTACCAAAATCTTTCTAACT AAGCCTTTCATGCACTTTGTTATGTATTTTGCCTCATTGACACGAGTATATTGGAGTTGGACAGTGTACATTATTTGCTA GAACTAGGAGTGTCAAGGTTATATGACTGGCGTTTTCAAAAATGCTGCGGCAAAAACACTAAAGGATAAATTACTTGTTC CATCTCGCTTTAGGTTTTGTTTGAGCTGAAGTGAGAGATTCCACGTCTTCATGCTAACCTCAGAAGTTAGCAATAAATTT TTAATTAAACTAACTCGCAATTTTCTTTAACTCATTCTTCTACTTTAACAGCAAAATTAAAAGTTGAATAACAACAATAA AATTTGTATGAATAAATCCTTAATTTGGTCATTATATGAATTATCATGGCATAATATTAAATTTTATTAAAAGTTGAAGA GTTAATATATAAGAATGGGGTTTGTCTAAATGAACCTAGATAAAAGTCGT
CDS sequence (LotjaGi5g1v0366100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTGTTTTTCGTGTTTCGATTCCAAGGAGGATGAGAAGCTCAATCCTAATCCGACCCACCAAATCCATGATCATAA TCATATTTCCAGATTACCCTCTGCCTCTGGAGTAGACAAGCTACGCCCAACAAGTAATGGAGCCTCCAAAAGGGAATTGC CAGCACCTGGCCTCAAGGACAAAGACAAGGACAAGGACAAGGACAAGGACAAAGACAAGGACAAGGACGGACTTGCAGCT GTCCAAATTGCCGCTCAAACTTTTACTTTCCGTGAACTTGCAGCTGCTACCAAAAACTTCAGACCCCAGTCCTTTATAGG GGAAGGTGGTTTTGGAAGGGTCTACAAGGGGCGCCTCGAAACCACTGCCCAGGTTGTTGCTGTTAAACAGTTGGACAGAA ATGGTCTCCAGGGTAATCGGGAATTTCTTGTTGAGGTTCTCATGCTTAGTCTTCTACACCACCCTAACCTTGTGAATCTC ATTGGATACTGTGCGGATGGAGACCAACGCCTCCTGGTTTATGAATTTATGCCACTGGGATCATTGGAAGACCACCTTCA TGATCTTCCCCCTGATAAGGAGCCCTTAGATTGGAACACTAGGATGAAAATAGCTGCTGGTGCTGCAAAAGGATTGGAAT ACCTACATGACAAGGCAAATCCTCCAGTCATTTATAGGGACTTCAAGTCATCTAATATATTACTTGAGGAAGGTTTTCAT CCAAAGCTTTCTGACTTTGGTCTAGCAAAGCTTGGTCCTGTTGGTGACAAATCACATGTTTCCACCCGTGTCATGGGAAC TTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGGCAACTGACAGTGAAGTCTGATGTATATAGTTTTGGGGTAGTAT TTTTGGAGCTGATTACTGGCCGTAAAGCCATTGACAGCACTCTGCCCCATGGAGAACAAAACCTTGTCACATGGGCACGC CCATTGTTCAATGACCGCAGGAAGTTTCCAAAGTTGGCAGATCCCCGGCTGCAGGGGCGGTATCCCATGCGCGGTCTTTA CCAAGCTCTAGCTGTGGCATCAATGTGCATTCAAGAGCAGGCAGCAGCACGTCCTCTGATTGGTGATGTCGTGACGGCAC TCTCTTACCTGGCCAATCAGGCTAATGACATTAACAATGCTGGGCATGATAAAAGGAGCAGAGATGATAAAGGTGGCAGA ATATTGAAAAATGATGAAGGTGGAGGATCTGGAAGAAGATGGGATTTGGAAGGATCGGAGAAAGATGACTCCCCACGTGA AACTGCGAGGATATTAAACAGGGATCTTGATAGGGAACGTGCTGTAGCTGAAGCCAAGATGTGGGGAGAGAACTGGAGGG AAAAAAGACGACAAAGTGTGCAGGGCAGTTTTGATGGTTCTAATGCCTAG
Protein sequence (LotjaGi5g1v0366100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGCFSCFDSKEDEKLNPNPTHQIHDHNHISRLPSASGVDKLRPTSNGASKRELPAPGLKDKDKDKDKDKDKDKDKDGLAA VQIAAQTFTFRELAAATKNFRPQSFIGEGGFGRVYKGRLETTAQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNL IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFH PKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTLPHGEQNLVTWAR PLFNDRRKFPKLADPRLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSYLANQANDINNAGHDKRSRDDKGGR ILKNDEGGGSGRRWDLEGSEKDDSPRETARILNRDLDRERAVAEAKMWGENWREKRRQSVQGSFDGSNA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 76 | 76 | - | – | |
| MobiDBLite | 7 | 28 | 22 | - | – | |
| MobiDBLite | 54 | 76 | 23 | - | – | |
| Gene3D | 60 | 176 | 117 | 1.7E-33 | – | |
| PANTHER | 61 | 406 | 346 | 1.1E-199 | – | |
| PANTHER | 61 | 406 | 346 | 1.1E-199 | – | |
| SUPERFAMILY | 82 | 374 | 293 | 1.01E-80 | ||
| ProSiteProfiles | 100 | 377 | 278 | 37.248 | ||
| Pfam | 103 | 305 | 203 | 2.8E-44 | ||
| ProSitePatterns | 106 | 129 | 24 | - | ||
| CDD | 106 | 374 | 269 | 5.67991E-96 | – | |
| Gene3D | 177 | 399 | 223 | 1.2E-58 | – | |
| ProSitePatterns | 223 | 235 | 13 | - | ||
| MobiDBLite | 384 | 432 | 49 | - | – | |
| MobiDBLite | 387 | 432 | 46 | - | – | |
| MobiDBLite | 448 | 469 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0366100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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