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LotjaGi5g1v0366100.3

Overview

Field Value
Gene ID LotjaGi5g1v0366100
Transcript ID LotjaGi5g1v0366100.3
Related isoforms 6
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT5G13160.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9FE20|PBS1_ARATH Serine/threonine-protein kinase PBS1; TrEMBL-Plants: tr|A0A151U8B2|A0A151U8B2_CAJCA Serine/threonine-protein kinase PBS1; Found in the gene: LotjaGi5g1v0366100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:68086892..68091559) extracted from Lotus japonicus Gifu genome v1.2.

ATAGGATCATCTGAATCAAGCAGGCTAGCCTTCACTCATGTCATGACTGCTGCTCCTAATTCATTCAATTCAATTCAATT CAATTCACGGTGATTCATGGTCACGCAGCACAGCTTTGTTTCGTTTAACCTAATTGTGTCTGTCTGTTGTTGTTTTGTAT TGCATTGCATAGCAGGAGTAGACAAGCTACGCCCAACAAGTAATGGAGCCTCCAAAAGGGAATTGCCAGCACCTGGCCTC AAGGACAAAGACAAGGACAAGGACAAGGACAAGGACAAAGACAAGGACAAGGACGGACTTGCAGCTGTCCAAATTGCCGC TCAAACTTTTACTTTCCGTGAACTTGCAGCTGCTACCAAAAACTTCAGACCCCAGTCCTTTATAGGGGAAGGTGGTTTTG GAAGGGTCTACAAGGGGCGCCTCGAAACCACTGCCCAGGTACGTAAACCTTTCTATCATTTCCTCTTATTTTTTCACTAC TCTTCAATAATATCCAAAAATAGAAAACCAAACAACATGGTGTTTTTCCCCATATTTTCCCTTGCCCTTTTGTATGCTTG TCTCACCACTGCACTATCTCCATTTTGATTTTTAAAGGACACAATTTGCCTCTCCCCCTTGTTCATAGTTTCACAATATT GTTCTTATCATCACTGGAAACAGTGGTAAACTAGGAAATAATGGTATGCAACTAATGAAAAATAATAATTGTGGCAGCCC CGAGGAGGACAATGAACTAATGGATAATAATAATTGTTCATATTTTTTGCTTAATGTTTCCTTCTCTATCTTATATAGTA TAACATTTTCTCAACTCACCATGCTCTTGTTTCTGCTTCTCACTCAGTTTGCAACTTCAATGTTTGCCAACTTTTATTCG TAAATTTGTCTTTTGTTTTTGTTTAGAAGATAAATCTTAAGAGTTTTAGTTTGGTTGAGGCTTCCAGTGTCTATTGACTC CTGACAGTTGTTCATTTATCTCTACAGGTTGTTGCTGTTAAACAGTTGGACAGAAATGGTCTCCAGGGTAATCGGGAATT TCTTGTTGAGGTTCTCATGCTTAGTCTTCTACACCACCCTAACCTTGTGAATCTCATTGGATACTGTGCGGATGGAGACC AACGCCTCCTGGTTTATGAATTTATGCCACTGGGATCATTGGAAGACCACCTTCATGGTATGGTTGTGATCTACACCTCT GGATTCTGTGGGAATTTCTTTGTTTTAGTTGAGTTTTTTTTCATACACTAAGAAATGGGATGGGATATTAGTATTCTTCA TTAGAAATGTACTGAACCCCAGGATGAGTAGCTAATACATTTAAAAATGAAATTAAAATCTCATCAATATCCCTTATGTC TTTTACAATACTAGTATAAGGAGCATGTCACAAGACAAGACATTATCTGAAGTTTCATATTTCTGAGAAAAGACTTAAGG TAAAATGGTACATTATCTTACATCAATGGTGAAATTATGGTACAGTGTAAATTACCACTATGTATTTTGCAATACTGAAA AACATAATTGAAAGATCCAAAGAAAAAAGCTGTGCTAAGGTTAAATCATGTAGTAGCTGGTGTATTCTAGGACTGACTTT GACTTTCTCTTTTAGAATATCACTTCTTGTCAGTTAGTTGGTTGTGCTTGTTGGAATGCAGGGTAGTCATGGTTAAGATG TTCTTAATCAGCATTTAGAGTGAGCGAGTGTTGTTTGTTTTTCTTACATTCTTGAAGGTGATAAGAAAATTTCCGTCTTG GTAATTTTAATTATTCCACAACTTTTAGTCTTGAACTTATTATGGTTACAGGCAATTGTCTGTGGGTTTTTTGCTCTTAT ATAGGAACACCTATGCAGCTATGCTCATTATGTTATGAGCTTTTAGTTGTTATTTTCTGTGCCTTGCCTCTATGATGTAT ATGGTTATAGCCAAGTCTCACATAGAAGTAATAAAATTTTGGGCAACAGTACGATACGACATGGCCATGATTCATGTCTT GAGATTGCTGCTTGCTCAACAAATATTCTGTAGCATTGATCAGGATAATTTCATGTGGTTTTCCTCAATCCTCATTATTT TGTGCTTATTAGTTTCTGTGCCAATAAGAGGCAACTATAAATAAAATTTAAATTTAAATTTTGCTGTTATATAACTTGTT AGCATTTCTATTTTCATATTCACTCCCCCCCCCCCCCTCTCTCGTCTCAACCATCGTCAACCTGGGTCACTTTCATCTCT CAACTCTCCAGCTCTCTCTGCTATAGACCTTTCTATATCTGCCGGCTCTTGCTCTTCTTTTTTATCTGAAGTAGCAAAAC TCTAAACATTTGGTCTTTGTTTTGGGCCTTCTCGTGAAATACAACCTCTTTGATCTTGGAGTTTTGGGTATACAAGATCT TTGGGTTTAGGGTTCCCTATAAACTTTCCTATTTCCTTTATATTTTCTTCTTTTCATAATCACTATGAAGTATACAATAG ATATTGAATAATATACTTGAATTGTATCATTACACTTTTTATGTTATAGTATATACTTCTTTATATTTTTGGTAGGATCT TATGATTTGTGTTAGGATCCTTTTGATTTACAATCTTTCACTTACCTCCCTCTCAATCCTAAGTAGGAACTTGATTTTGA CAACCTTGATTGTTGTTGTATATTAAGTGAGGCAGCGGTGATCATTGGGGCTAAGCTTTTGGATTAGAGGTAAGACTTTT GATAGAGAAAACTAAATATCAGCTCAGTCTGAATAGAAGTAGGAGGGCCAAAGGCTCCTTCCGAAATTTCATATAAGAAT AAAATAAAAAATTTACATTTAAAAAGTTTTAAATGAAAAGTGAAGGATATTTTTTAAATGAGTTAAACCTGTATATATAT ATATATATATATATATATATATATGTTTCTTTCGAAGGCCAAGCATGGCCTAATTATATTCAGACCTGGGCGTGAAAGAA TTAATTGGAATTTCTACAGTGAAGATATTTCATTGGTTGTTTTAGCCTTCTGATTTGCCAACTCATTTTACTAGAGATGT ATGCAGGGGTGAATAAAGTGTGATATTAAGTGCATTGACAATGTAGGATCTTGAACCTGAACATTAATAGAATTTCTTGG TTGAAAGAATAAAAAATGGAGGTAACTATTGTGTATTCATTGAAGTCCTTGAAATTGCAATATTGTGGTATTATAAAATA GTGGACTTTAAAAGTCTATACCTAATGACTAATGAAACTTCCAAACCATCAATTTAGCTAGAAGGACGGAGCAATTCATC TTAAACTCCTCAGGGCTCCATTTTTTCTCCTTCAAGAGAGACATAGAGAGAAGAATGAACATGTCACTCTGGAAGATTTA TTTATCAATGATTATGCATATATATGTTATGTAGTGGCTGATGAAATCTAATAATTTTTCCTGAACAAGCCTATTCAATT TAGTGGGGAGCCTAGCCTTTCCATGTTAATTGTCTTAATTCCAATTTACAGAAAAGGAATGCTATACATATTTTAATCAT TGTATTGTCTTCTAGAGGTGTTTCCATTTTATCTTGTAATCATATTTGTCTTCTGATGATTGAGGAGTGTCTGTAAACTC TGGGAAGGATGGAGAATAAACGCTGTGGTTATCACATTACAGTCTTCTTGATCATCATGTTATCTTTTATCTTTGATAAC TAATGTTTAATCATTGTTTATTGACTCGTGTGCAGATCTTCCCCCTGATAAGGAGCCCTTAGATTGGAACACTAGGATGA AAATAGCTGCTGGTGCTGCAAAAGGATTGGAATACCTACATGACAAGGCAAATCCTCCAGTCATTTATAGGGACTTCAAG TCATCTAATATATTACTTGAGGAAGGTTTTCATCCAAAGCTTTCTGACTTTGGTCTAGCAAAGCTTGGTCCTGTTGGTGA CAAATCACATGTTTCCACCCGTGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGGCAACTGACAG TGAAGTCTGATGTATATAGTTTTGGGGTAGTATTTTTGGAGCTGATTACTGGCCGTAAAGCCATTGACAGCACTCTGCCC CATGGAGAACAAAACCTTGTCACATGGGTAGTCCTCTAATCTTTTCTTTTCATTTTAAGTTAGATTGGCATGCATCAACT TGTGCATACATAACAATGGAGCGGTAATGGTGGTTATGTGTGTTTTGAACAGGCACGCCCATTGTTCAATGACCGCAGGA AGTTTCCAAAGTTGGCAGATCCCCGGCTGCAGGGGCGGTATCCCATGCGCGGTCTTTACCAAGCTCTAGCTGTGGCATCA ATGTGCATTCAAGAGCAGGCAGCAGCACGTCCTCTGATTGGTGATGTCGTGACGGCACTCTCTTACCTGGCCAATCAGGC TAATGACATTAACAATGCTGGGCATGATAAAAGGAGCAGAGATGATAAAGGTGGCAGAATATTGAAAAATGATGAAGGTG GAGGATCTGGAAGAAGATGGGATTTGGAAGGATCGGAGAAAGATGACTCCCCACGTGAAACTGCGAGGATATTAAACAGG GATCTTGATAGGGAACGTGCTGTAGCTGAAGCCAAGATGTGGGGAGAGAACTGGAGGGAAAAAAGACGACAAAGTGTGCA GGGCAGTTTTGATGGTTCTAATGCCTAG
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0366100.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTTAGTCTTCTACACCACCCTAACCTTGTGAATCTCATTGGATACTGTGCGGATGGAGACCAACGCCTCCTGGTTTA TGAATTTATGCCACTGGGATCATTGGAAGACCACCTTCATGATCTTCCCCCTGATAAGGAGCCCTTAGATTGGAACACTA GGATGAAAATAGCTGCTGGTGCTGCAAAAGGATTGGAATACCTACATGACAAGGCAAATCCTCCAGTCATTTATAGGGAC TTCAAGTCATCTAATATATTACTTGAGGAAGGTTTTCATCCAAAGCTTTCTGACTTTGGTCTAGCAAAGCTTGGTCCTGT TGGTGACAAATCACATGTTTCCACCCGTGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGGCAAC TGACAGTGAAGTCTGATGTATATAGTTTTGGGGTAGTATTTTTGGAGCTGATTACTGGCCGTAAAGCCATTGACAGCACT CTGCCCCATGGAGAACAAAACCTTGTCACATGGGCACGCCCATTGTTCAATGACCGCAGGAAGTTTCCAAAGTTGGCAGA TCCCCGGCTGCAGGGGCGGTATCCCATGCGCGGTCTTTACCAAGCTCTAGCTGTGGCATCAATGTGCATTCAAGAGCAGG CAGCAGCACGTCCTCTGATTGGTGATGTCGTGACGGCACTCTCTTACCTGGCCAATCAGGCTAATGACATTAACAATGCT GGGCATGATAAAAGGAGCAGAGATGATAAAGGTGGCAGAATATTGAAAAATGATGAAGGTGGAGGATCTGGAAGAAGATG GGATTTGGAAGGATCGGAGAAAGATGACTCCCCACGTGAAACTGCGAGGATATTAAACAGGGATCTTGATAGGGAACGTG CTGTAGCTGAAGCCAAGATGTGGGGAGAGAACTGGAGGGAAAAAAGACGACAAAGTGTGCAGGGCAGTTTTGATGGTTCT AATGCCTAG
Download CDS Sequence

Protein sequence (LotjaGi5g1v0366100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRD FKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDST LPHGEQNLVTWARPLFNDRRKFPKLADPRLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSYLANQANDINNA GHDKRSRDDKGGRILKNDEGGGSGRRWDLEGSEKDDSPRETARILNRDLDRERAVAEAKMWGENWREKRRQSVQGSFDGS NA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.200.20
1 30 30 4.8E-10 –
ProSiteProfiles
PS50011
1 230 230 29.842
IPR000719
PANTHER
PTHR27001:SF771
1 260 260 2.0E-155 –
PANTHER
PTHR27001
1 260 260 2.0E-155 –
Pfam
PF07714
2 157 156 1.9E-33
IPR001245
SUPERFAMILY
SSF56112
2 227 226 8.63E-63
IPR011009
Gene3D
G3DSA:1.10.510.10
31 252 222 4.4E-59 –
ProSitePatterns
PS00108
76 88 13 -
IPR008271
MobiDBLite
mobidb-lite
237 285 49 - –
MobiDBLite
mobidb-lite
240 285 46 - –
MobiDBLite
mobidb-lite
301 322 22 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0366100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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