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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0024100 |
| Transcript ID | LotjaGi6g1v0024100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nudix family hydrolase; TAIR: AT5G47650.1 nudix hydrolase homolog 2; Swiss-Prot: sp|Q94B74|NUDT2_ARATH Nudix hydrolase 2; TrEMBL-Plants: tr|I1NDT8|I1NDT8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0024100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:4431230..4438274) extracted from Lotus japonicus Gifu genome v1.2.
CACGGTGTGAGTTTGAATTTCTGAGAGGTTTATTGGGTTTCCTATTGCTCCGTGTTTCGTCTTTTAGCTTGGTTTTTTCT TGTTGGTTTCTTGGTTCTAATCCCTCAAGCAACGCAAACATGTTCAATGACTCATTCAAAGTCCAGCCACATATTGCACG GAAATTGTCCCCTTTAGCTCCCTATAAATATTCTCAAGCCATTATGCTCTCCCACATTGTAGTAATAATTACTTCATTTT GCTCTTCTCTTCTGTGTTGATCACATTCAATTTTCACATAATAATCTTAGTTACTGCATTTTGCTATATTTTCTCTTGTG TTGATCACATTTGATTTTCATGATGATGAGGTTTAGAGCTTGCAAGCTTTATACTTCTTGCCTTTTGGCAACTTCTAAAT TGATATCCACATCTTCTTCAGCTGTCCCTCAAATTCCAATTAGGGTTTTTCATTGCTTTAACATCCCTCAATCTCATGGT AATGCATATTTACCTTCATTAGTTTTTTTGTTGTTTATGAACATTATTCAAGTGCTAATAGATTTTAATGTCACCCCAAT AGATATTCATGTCATCCCCTTCTGCACTTTCAATGTGCGGAATGTAAAATATGTGTTCCGCACAGATAAGTGCAGTGTGT AATTGATTTCCGCACATATAAGTGTGGTAAAATTGGGTGGCGAGAAAACGAATAGGGGTGGCATTAAAATCAATTCCCTG CAGGCTGCCACAACAGTTTTCTTGTTGTTTATGAGCATACTTGAAATGCTAATTTGCTATCCATTTTAGGCTGCAAGAAC AGCTTTCTTTTCTCAAGACCATACATGTCAGCCTCTTCAGCTCTTTTGGCCAAGGATGAGGAAGTGAGAGGTAAAGGCAT CGGATTACTCAGAGCAGTTGAAGACAAACATGGGGGAGTAATTGTAAACATGGAGGAGCCTATGGATTCCTTGGTTTTTG CTTCTTTGTTAGAAGCTTCATTATCAGAATGGAAGAGACAGGTAGATTTCAAACCAACTACATGCATTGTTCAATCCATA TTTTAAATTGTGGTTGCGGTTATGTCATGAACCTAGAAATTAAGAACAATTGGAGCCGAGGTGGCCTCATTTGCAGTCAC AATGCAATTGCAATTTGCAAAGACCTCTAAAACTTTCATATTAAGATAGTAACTGCGACTGCGGTTGTGGATTACAATTT CTGTCATTTGTAAGTCTGATTAGGTGTTTTGGACTCACCATTTCAATTTGTTCTTCATGTGGTCTTTTAGGGAAAGAAAG GAGTATGGATCAAGTTGCCCAGAGAACATTCAAATCTTGTGCCCTCTGCAGTGAAGGTAAAGACTAATTTTCTGCAACAT AGCTTGGAATTTTACCAGAATCTATGAAAGTTAGAAGCCATTTTGTGATGATTTTTCATGCCTTGAAATCTTGTGCTGCT CCTTTTACAGGCTGGATTCAGATACCACCATGCTGAACCTGACTACTTGATGCTTGTAAACTGGATTCCAAATACTCCTG ACACCCTTCCTGCAAATGCTTCCCATCGCGTTGGTATTGGTGCTTTTGTCATGAATACCAATATGGAGGTAATCCTTATT TGTTTCCATTTTCAGTGGTTCTAGATTCTGTTTTTGTTTTTACCATCTCTTAGAAAACACGCAGAGAATGTTTTCTTTTT TTTTTTTACAAAAACAAACTGTTAAAGAATCTTGCAATAGTAAGGGAAATTTTAAAATCATTAGTGTTAATTTTTTTCGT AGACAAAATCACTAGTGTTATATTCACACCTCATTTCCACCAACATCCAGACTCAAAGAAAGAAAGAAATGAAAGCGAAG TGTGAGATATTATGGGTGGTGAGATGAGTAAATAAGAGCGAGATAGGAAAAAAATGAGGTAGAATTGGGATGGAACTTGG AAGCGAAAGCAGGTGTGAATATATGAAAGATGATAATATGTCTTTTAACAGGTCAAACTTTCAGAGTACTTTCTGGTAAT ATAGTATGGTTTAGTTGTTACTTGTTGGGGCATCTAAAGTTCGTATCAGAATTTAAATTCTGTCCTTTTCATATCAAATA AGATTCAGATTAAAGGATGTCTATTAAGATAATTGATAAAAAAATCTCAACTCATTTTATAGGTGCTGGTGGTTCAGGAA AGTAATGGCAGATTCAGTGGCAAAGGAATATGGAAATTGCCAACTGGAGCTGTAAATGAAGTATGTTACAGTGATGCTTG ATCATTATACAACAAAACATAAATAGCCATAACTGATCATTGATTTTTTTTAGAAAATCATTTTTTAATTAATTTAAATA TCTTTTGCAGGGTGAGGATATTTGTAGTGCTGCAGTTAGAGAAGTCAGAGAAGAAACAGGGGTATGCAAAACCATATAAG ATAGAGTTTAACCATTGAGTATTTTTTAAACCTTTTCAAAAGTCTAATGCAGCTGCGTTTTTTCTTCTTTCAGATAGAAA CTGAATTTGTTCAGGTTTTAGCATTCAGGTAAGAGCAAGACCATGTAATTTCTTCGAATAGTATATACTCTCGGAATGTT ACCATGGATTCTTCCTTTTTTAGTACTATGTGAAAGTTAGAATGATCATTTTACACTAGTACCAATGATCTGTAGCATTT TACACTAGCATTACCATGGATTCCTATTATTGTATCATTCTACAATCATTTCCTCTTTAAATTCAATCTTGTATGATATG TCTTTCTGGAATCAGGGAAGGGCATAAATCTTTCTTCCAGAAGTCAGACTTGTTCTTTGTTTGCATGTTGCAACCTCGCT CCTTTAACATTCAGAGGCAGGTTTCAGAAATTGAGGCAGCTCAGGTATGTGTTCTGAAGACTAATTAGCATTCAATTATC ATTCATGAATATGCCTGAGTGGCATTCTACAAATTTATTTTTCTTCCTGAATCTTAATCTTTACAAAGTTTATGAAGGCT GCCATGACATTAGCATCAGAAAACGTGTAAATTGGCAAATTGGTCCCTGATTATGGCGCATGCAAGTTAGTCCACGGAAG AAGGAAATACGTTTGAAGTCCTTGCATGTGTAAAACGTTGGACAAGTTAGTTCTACAGTCAGATTTTGTCAACTAAAACA TCAGTCAATTTCACTAAAGTTTTACATACTCAGGGACTTTCGAACATATTTTCTTCTACCGGTGACTAACTTGCCACCGT GATAATCTTTCAGGACTAACTTGCCTATTTATTCATCAGAAAACAAATAACTTCACATGAACTCCTAATAGATTTTAATT TTATGTAGTAATATGCCAATTATTCTAATGTTGTTTTACTTTCTTTTCAGTGGATGCCAGTTGAGGATTATGTAGCCCAG CCTTTTGTCAGAGAAAATGAGCTATTTGACTTTCTTACAAAAATATGCTTAACAAAGTTGGATGGGAAATACACTGGCTT TTCTAGCCGACTTACTAGCACATCCTCTAGCAAGAAATCCTATTTGTACTTCAACCACAAGGATGGTGGCCGCTTGTTAG CTTCCAAACATGATCAGCATGCTTGACTTCCAATTTATGGGATCAGGATCCTCTCATGTTGAAATTTTGTGTTTATCTCT CTCTTCAGAAGTATTAAACAGGTAGAACCCTTTAATTATTTATGAAGAAAGAAATAGACACAATGTTTCACTTGACATTG TCATGTGACATGAGAAGATCATAATCACAAGTTCTGTGACATTTACTTGCTAGGAGGCTTCATCATTATTTTGGGCTCAT TTCCTTTGACCAATAAGGGTTGTTAGCATTGTACAGAAATCTCAACACATTATTTTATTTTTCCAAGCCACAAGAGGGTA GGAATAATGCTTGCCATTTCATTATTTGTTCATTGTATCAAATCTTTCATTCTTGGGTGGAAGACTGCTGATTTGTTACT TTTTTGTTTCAGATTGTTGTAATTTCCATCTCATAGACTATACCATTAATTAAAATAATAAGAACCAACTTTCTTATTTT TGTGATGTTGTGATCCTGCTTCAATGTATGCAGTTTTTGTATTACGTTTTCACTGGGATAGCTTCATATTTTCACCACAC TGAATTTAACGAGTGGAAATTGATTTTAAAATGTTCCATCGATATTTTTGAGGAGTACATCACAGCTGCAATTGCAATAT AAACCCTAGTGCGATAGCTAATGCTAAACAAGTTCATTGAAACTTGTCCAGAAATTTAACTCTTGTTGATTATTAAGATT CATTCACACCCAACTTTTTTTTCATTTCATTTCTACTCAAATTTTGTTCATATCTCCCTCTTCGTTGGCGAAGGCTAAGT AAGGTGCACAAGCTTGTAAATGATGTATGTGTGCAAGATAGCATTCTTACCATGATACTAGAAAAATTAGATGTCTGAGA TTGAATCAATGAAATGACCCAAATACCTTTCCTTCAGTCCACCTCTCCACTCAGATGCTTCTTCTTCGGGTGCATTCTTA CCATAATACTATAGATGTTGAGAAGTCTCGCATTGATTATATATATAGCGAACATAACCCTTATATATGGGAATACAATC CTCCCAACTAACTTTTGGGGTACAGCTAGACCTCTTAAATTCTAATACAAACCAACATGCAAAAACTTAAAGCAAGTTTG AACTAAAAAGTAACAACATATTTTCGTCGCTAATCACTTACTCTTCCAATTCTCAGGTAAATTGGAGACCTGGCAACCTT TTGGCCATCTTCACCCCAAGCAAGTTTGAATTTTTCGACTACATCCTCGCGAAGAATCTCCACTCCCTTCTCCTTTGCAG TCTGATATGCTGACAATGATCTTATATAAGTAAATAAACTATCCAAATCCATCATGGTCTCCATCACAAACTCAAAAGGC CCTGTGTGATCAGTATCCACAGGCACAAATGGAAAGTCAAAGCTTAGAAACTTTTCTCTAACTGATCTAGATTTTGTCTC CCAATAAGGATCCAGATCAAAGAAATAAAGTTGATGAAGAATCGAGTCTAGTACCGCGTCACAAAATCCGGGCAAATCGT AACGCCAAGCAGCAATGACTCCATGAGGTTTCTTGAGAACCAACTTGACTTGTTCATAGAAAGTTGGAAGGTGAAACCAG TGGAGAGCTTGGGCAATGGTCACAAGGTCTATGGTTCCCTGAGGTGCAACTATTTGTTCAAGCTCAGCCAAAGACATGGT TGGAGGTGTATACTCATACCGCACATTGGATATTTTTTCTGCAAATTCAAGCTGTTTCTCACTGGCATCCGTAGCTATCA CATTCTCGTATAGTGCAGCTAACTGAAATAATTACCGATTAGTTTTGGTCCAAGCAAAAGCTATTCGGGGATAAAAAAAT TGTACCCTCTTTGTGTGTGTGAATTTGATAAATAAAGCAGAATTCCTATATTATGAATGTAAAAGCTAGCATACAACACA AACTGCAGAGTTAATTATTTTTATAAACTATACCGTTTGTGGTGATTTTAAACAACCTGCATGTGTCGCCAGAAATACAA TTGACATTTCTTTTCCAAACATGCAAATGCAAAGCTGACTATGGTGAAGCGTAGAAGTTTCTAAAACAGTGCAGCTTTTA AGGATCGAACACTCATACGTTCAGATTACCACTTTTTACCATTGGGACTGGCACTTATTGAATCTAATAAAGTATAATGT GAATGGTCTTCAACTCAATTCATGAAAATATATAGTATACTTTGTACTCGTTTGGAGGTCACGATGATAAAGCATAATAT AATAAGAGAGTTGGATAAGGCCACAATTGGATTAGCAAGATAGCCACTTACTAATCTTATTATCGTGCTCAAGGAGATAA GTGGAAGAGTGGGAGGATTGAATTCGGAGTAGGGGCATATCCAAGAATATTTTTATTGGGGGCCGAACTAAAAGACTAAA TAAAATTATCATTGAATATTATATAACCTTTAAATAAGAAAAAATTAATTTAAATACAACTCTTAATTTTTTTTGTAGTA CTAAATTTATTTATTATTGTATCAACGATGATTTTTTCCAGTAATTTCTCTCAATATATACAATTAATAAAAAAATTATG AGAAAATCATCTTCAATCTTGTTGCGAAGCGGAGTCTTGGAAACTTTCACTGCATAAAAATTTCACTCTACGGATGTTGT TGAAACAGGAAGTGCCTAAACAAGATGTACCAATTTATTAACAAGGGAAACATCTGGACATTTTCCTAAATTAAGATCTC GGGAAACATATGAATGATAATGTCTTAGCTGAAATAGAAAATTCCTTTTTTTCAGCTCAGACAAATCATCTGCATAAGAT TTCTCAACAAGCTTACAATTTTTTTTCATTATCAAATAATTAAAAAAAATTCCTTAGGATTTAAAGTTAAATTAAGCATA AGAAGTTTCATTGTCTCTGCATTGAATCTTCTGTTTAATTCACACTATTGCAAATCAATTGCATAATAAAATACTTTTTT TTTTGTTGTTTTCTCTCTACATATATGATTGACTTTTTATCTTATTAAGAAAATATTTAATTTCAATTGTTAAAATATAA AATAAAAGCTACATTTAATCAATCTTTTTTTTAAGAATGAAGTTCTGTGATAATTGAGAGTTCTATAACAACAATAACAA AAACTTTGGGACCAAACAACAACACATAAAAAATCTACATAAAATATTTATAGTCGGTAAAATTTTCAAAATTCTTAGGG GTTGTAGCCCTGCAAGCCCCTCCCTAGATACGCCTTGATTAGGAGATAGATGTGACTCACAGATTTGGCAGCTTGGCCGT TTCCGGTGGCAACATCCCAAGCTCGGTGGTGAGAGGGAGTTTTAGAAGCAATGAATTGGAAGAGTTGTGGAGGATAACTT GGTCTTCCATCTACATATTGCTTTGCCTGTTTCTCAAACAGCTCTGCCATTTCTTTTGAATCTTTGATGATGATGATATT CTTCTTCGATCAGTATTTAATTTGTAGATGAATCATCATGCACGTTTTTAAATTAAATATGCTCACCGACACATTCCAGG ACGTC
CDS sequence (LotjaGi6g1v0024100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGCCTCTTCAGCTCTTTTGGCCAAGGATGAGGAAGTGAGAGGTAAAGGCATCGGATTACTCAGAGCAGTTGAAGA CAAACATGGGGGAGTAATTGTAAACATGGAGGAGCCTATGGATTCCTTGGTTTTTGCTTCTTTGTTAGAAGCTTCATTAT CAGAATGGAAGAGACAGGGAAAGAAAGGAGTATGGATCAAGTTGCCCAGAGAACATTCAAATCTTGTGCCCTCTGCAGTG AAGGCTGGATTCAGATACCACCATGCTGAACCTGACTACTTGATGCTTGTAAACTGGATTCCAAATACTCCTGACACCCT TCCTGCAAATGCTTCCCATCGCGTTGGTATTGGTGCTTTTGTCATGAATACCAATATGGAGGTGCTGGTGGTTCAGGAAA GTAATGGCAGATTCAGTGGCAAAGGAATATGGAAATTGCCAACTGGAGCTGTAAATGAAGGTGAGGATATTTGTAGTGCT GCAGTTAGAGAAGTCAGAGAAGAAACAGGGATAGAAACTGAATTTGTTCAGGTTTTAGCATTCAGGGAAGGGCATAAATC TTTCTTCCAGAAGTCAGACTTGTTCTTTGTTTGCATGTTGCAACCTCGCTCCTTTAACATTCAGAGGCAGGTTTCAGAAA TTGAGGCAGCTCAGTGGATGCCAGTTGAGGATTATGTAGCCCAGCCTTTTGTCAGAGAAAATGAGCTATTTGACTTTCTT ACAAAAATATGCTTAACAAAGTTGGATGGGAAATACACTGGCTTTTCTAGCCGACTTACTAGCACATCCTCTAGCAAGAA ATCCTATTTGTACTTCAACCACAAGGATGGTGGCCGCTTGTTAGCTTCCAAACATGATCAGCATGCTTGA
Protein sequence (LotjaGi6g1v0024100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSASSALLAKDEEVRGKGIGLLRAVEDKHGGVIVNMEEPMDSLVFASLLEASLSEWKRQGKKGVWIKLPREHSNLVPSAV KAGFRYHHAEPDYLMLVNWIPNTPDTLPANASHRVGIGAFVMNTNMEVLVVQESNGRFSGKGIWKLPTGAVNEGEDICSA AVREVREETGIETEFVQVLAFREGHKSFFQKSDLFFVCMLQPRSFNIQRQVSEIEAAQWMPVEDYVAQPFVRENELFDFL TKICLTKLDGKYTGFSSRLTSTSSSKKSYLYFNHKDGGRLLASKHDQHA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 280 | 280 | 4.3E-171 | – | |
| PANTHER | 1 | 280 | 280 | 4.3E-171 | – | |
| Gene3D | 20 | 105 | 86 | 1.1E-29 | – | |
| Pfam | 22 | 100 | 79 | 5.4E-31 | ||
| PRINTS | 72 | 90 | 19 | 3.3E-9 | ||
| SUPERFAMILY | 80 | 235 | 156 | 2.57E-30 | ||
| PRINTS | 94 | 110 | 17 | 3.3E-9 | ||
| PRINTS | 110 | 128 | 19 | 3.3E-9 | ||
| ProSiteProfiles | 112 | 244 | 133 | 16.238 | ||
| CDD | 113 | 244 | 132 | 1.42273E-64 | – | |
| Pfam | 113 | 230 | 118 | 2.0E-21 | ||
| Gene3D | 114 | 244 | 131 | 4.9E-33 | – | |
| ProSitePatterns | 149 | 170 | 22 | - | ||
| PRINTS | 198 | 222 | 25 | 3.3E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi6g1v0024100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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