Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0043700 |
| Transcript ID | LotjaGi6g1v0043700.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ferrochelatase; TAIR: AT5G26030.1 ferrochelatase 1; Swiss-Prot: sp|P42044|HEMH_CUCSA Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr|A0A0B2RCX6|A0A0B2RCX6_GLYSO Ferrochelatase; Found in the gene: LotjaGi6g1v0043700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:8278248..8280867) extracted from Lotus japonicus Gifu genome v1.2.
ATTACAAATGTTAGTTGGCAACAGGAATCCTTTATCAAAGGAAAATTGTTAGACTGCACTCCAGAAGAGAAGAGTATATG TTTTGGTCTATAAGTAGTTCACATAGTCTATTTTGAAATTTGAATTCTTTTATTTATTATTCCTTGTGTCAATATGTAGC AGGTGCAGAAACTTGTTTTCAATTGATCTGTAGTATCTGCTGACTAAATTGCTTGATCACATCCTTTCCTTTGCTCACAG GTCATGTACTGATATCCGAAACATTACATTTGTCACTTGCCACTCTGATTCTAACAAGTCTACATCTCAAGCATCCTTGT TTTTGTGTCCTGGCTCGACGAATAGGAGAAATGGCATGCTTGCAGGACCTTTTTCTGGGAACCTCTCTGGCAGGAAAAAT CTTGTTTGTCAGACAAATTATTCTGTGAATACAAGCACTTTTGATGGGACTGCTTTAGAATCTCCCTCCCGTGTTGTGGA AGAGAAAGTTGGGGTCTTGCTTCTCAACCTAGGAGGGCCGGAGACGCTCCATGATGTTCAACCTTTTCTATTTAATCTTT TTGCAGATCCTGTATGTCTGATTGTTTTTCTACTTCCTGAGCCAATTTACTCGAGTGTTTTTCCCCTCATATATGCCTAA ATTCCATATTAGCATACACATTCATTAGTTTTGTATGCTTATATGTTTTTGTCTTGAAACAGGATATCATTCGTCTCCCG AGGTTGTTTCGGTTTCTCCAGCGACCACTGGCAAAATTGATTTCTACACTTCGGGCTCCTAAATCCAAGGAAGCGTATGC TTCTATTGGAGGTGGCTCTCCTTTACGCAAAATTACCAATGACCAGGTGGATTTCAAATGCTCTTTAGCACTTTTCTTGT TTTGGTTTTACCATCATTTTATGCTGTGTGCCGTTCCTTTTTCTGTGCGAGTGGAATGCTTTTTTGGCTTCTTCCTTTTA TTTTCAATAAAAACTCTGTGAATTTATGGTTTGGAATGGAACTAACACAGCTTTCATGATTTCTGGATTCTGGGCATGTA CAGGCACTGGCAATTAAAAAGGCTTTGGAAGCAAAGGGTCTCTCTTCAAGTGTCTATGTTGGGATGAGGTACTGGTACCC ATTCACAGAAGATGCAGTTCAGCAAGTAAGTCCTCACATGTCTCCATTCTACATGATTCTCATCATACATCCATTTTTTT TCTTTTGATTATTAAATGACGTACTGGTTACAAATCATGAATTAGATTATTTATTCTGAGCTCTATTTTATCACCTTAGT TTGGAATCTAAAACTAATAGCTCCTCTTGGGTGTAGATTAAGAGGGATGGAATAACAAGGCTTGTGGTATTACCCCTTTA TCCCCAATTTTCTATATCTACAACTGGGTCAAGCATCCGTGTCCTCCAGCATATGTTCAGGTACTCTTTCTTGGCACTTT GTGCATACTCTTAAATAAATGATTGAAAGATTATTACTAATATTTGATGTTATTTACGTGTCAGGGAAGATGCTTATTTG TCCCAGCTTCCTATTTCTATTATAAACTCTTGGTATCAACGAGAAGGTTACGTTAAGTCAATGGCTGACTTAATTGAGAA AGAGCTCCAGACTTTTTCTGAGCCAAAGGAGGTAGTTTCATTATTGCATTGAACGCTTTCAACATGGTTCTTTTGATGCA ATAAAATTAATAAAAATTCCCTATGGAGCCTGCCTTCTAAGGATTGAAGGCTATATGATGTATTTTACTGCAATCTGAAC CATGGCATTTTCCCCCATATATCAGGCAATGATATTTTTCAGTGCACATGGTGTGCCCGTCAGTTATGTTGAGAATGCTG GGGATCCGTACCAAGTTCAAATGGAGGAGTGCATCTTCTTGATCATGCAGGAGTTAAAAGCTAGAGGAATTAGTAATGAG CACACTCTTGCCTATCAGGTTTGTCTTGAAGTCTTTTAACTTGCTTTTCTTGCATCTTGAGTTGAATGGAGACTTAATGT TTACTTAATGGCTTGAGTTATTGCTTTCCGTGGTTTACTGTGTATTTTTCCTATCTTACACTTATGTTGGATGAATTTCC AGAGTCGAGTCGGTCCTGTACAGTGGCTGAAACCATATACAGATGAAGTTCTCGTTGAGCTTGGCAAGAAAGGTGTGAAG AGTCTTTTAGCTGTTCCAGTGAGGTACATTATTATGGGCCTTTTGCACTTGTTGATTTGAGCTCTACGCGATAGTATATG GATTTTATAATACTTTACCGTACCAGAACCTTAGTAACAGTCATCCGTTCTTCTTATATTCCAGCTTTGTGAGTGAGCAT ATTGAGACCCTTGAAGAAATTGACATGGAGTACAAGGAGTTGGCTCTTGAATCTGGTGTCAAGAATTGGGCACGTGTCCC TGCCCTCGGCCTTACCCCTTCCTTCATTACTGATCTGGCTGATGCAGTAATAGAAGCTCTCCCATCAGCAACAGCAATGT ATGCACCGAGCAGCACCAATGAAGATGTTGAACAAGACCCAGTTAGATTTTTTGTCAAGATGTTCTTTGGTTCAATCTTT GCTTTCTTCTTGCTTTTGTCACCCAAAATGATAAATGCCTTCAAGAATCATGTCATTTAG
CDS sequence (LotjaGi6g1v0043700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTACAAATTATTCTGTGAATACAAGCACTTTTGATGGGACTGCTTTAGAATCTCCCTCCCGTGTTGTGGAAGAGAA AGTTGGGGTCTTGCTTCTCAACCTAGGAGGGCCGGAGACGCTCCATGATGTTCAACCTTTTCTATTTAATCTTTTTGCAG ATCCTGATATCATTCGTCTCCCGAGGTTGTTTCGGTTTCTCCAGCGACCACTGGCAAAATTGATTTCTACACTTCGGGCT CCTAAATCCAAGGAAGCGTATGCTTCTATTGGAGGTGGCTCTCCTTTACGCAAAATTACCAATGACCAGGCACTGGCAAT TAAAAAGGCTTTGGAAGCAAAGGGTCTCTCTTCAAGTGTCTATGTTGGGATGAGGTACTGGTACCCATTCACAGAAGATG CAGTTCAGCAAATTAAGAGGGATGGAATAACAAGGCTTGTGGTATTACCCCTTTATCCCCAATTTTCTATATCTACAACT GGGTCAAGCATCCGTGTCCTCCAGCATATGTTCAGGGAAGATGCTTATTTGTCCCAGCTTCCTATTTCTATTATAAACTC TTGGTATCAACGAGAAGGTTACGTTAAGTCAATGGCTGACTTAATTGAGAAAGAGCTCCAGACTTTTTCTGAGCCAAAGG AGGCAATGATATTTTTCAGTGCACATGGTGTGCCCGTCAGTTATGTTGAGAATGCTGGGGATCCGTACCAAGTTCAAATG GAGGAGTGCATCTTCTTGATCATGCAGGAGTTAAAAGCTAGAGGAATTAGTAATGAGCACACTCTTGCCTATCAGAGTCG AGTCGGTCCTGTACAGTGGCTGAAACCATATACAGATGAAGTTCTCGTTGAGCTTGGCAAGAAAGGTGTGAAGAGTCTTT TAGCTGTTCCAGTGAGCTTTGTGAGTGAGCATATTGAGACCCTTGAAGAAATTGACATGGAGTACAAGGAGTTGGCTCTT GAATCTGGTGTCAAGAATTGGGCACGTGTCCCTGCCCTCGGCCTTACCCCTTCCTTCATTACTGATCTGGCTGATGCAGT AATAGAAGCTCTCCCATCAGCAACAGCAATGTATGCACCGAGCAGCACCAATGAAGATGTTGAACAAGACCCAGTTAGAT TTTTTGTCAAGATGTTCTTTGGTTCAATCTTTGCTTTCTTCTTGCTTTTGTCACCCAAAATGATAAATGCCTTCAAGAAT CATGTCATTTAG
Protein sequence (LotjaGi6g1v0043700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLTNYSVNTSTFDGTALESPSRVVEEKVGVLLLNLGGPETLHDVQPFLFNLFADPDIIRLPRLFRFLQRPLAKLISTLRA PKSKEAYASIGGGSPLRKITNDQALAIKKALEAKGLSSSVYVGMRYWYPFTEDAVQQIKRDGITRLVVLPLYPQFSISTT GSSIRVLQHMFREDAYLSQLPISIINSWYQREGYVKSMADLIEKELQTFSEPKEAMIFFSAHGVPVSYVENAGDPYQVQM EECIFLIMQELKARGISNEHTLAYQSRVGPVQWLKPYTDEVLVELGKKGVKSLLAVPVSFVSEHIETLEEIDMEYKELAL ESGVKNWARVPALGLTPSFITDLADAVIEALPSATAMYAPSSTNEDVEQDPVRFFVKMFFGSIFAFFLLLSPKMINAFKN HVI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 371 | 371 | - | – | |
| PANTHER | 4 | 402 | 399 | 5.3E-239 | ||
| PANTHER | 4 | 402 | 399 | 5.3E-239 | – | |
| TIGRFAM | 25 | 350 | 326 | 2.2E-114 | ||
| Hamap | 26 | 351 | 326 | 37.291 | ||
| SUPERFAMILY | 26 | 358 | 333 | 1.8E-107 | – | |
| Pfam | 27 | 350 | 324 | 2.6E-111 | ||
| Gene3D | 27 | 351 | 325 | 3.4E-122 | – | |
| CDD | 28 | 190 | 163 | 8.00081E-69 | ||
| Gene3D | 189 | 332 | 144 | 3.4E-122 | – | |
| CDD | 198 | 334 | 137 | 1.38278E-58 | ||
| ProSitePatterns | 217 | 236 | 20 | - | ||
| Phobius | 372 | 390 | 19 | - | – | |
| Phobius | 391 | 403 | 13 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ferrochelatase activity | Catalysis of the reaction: protoheme = Fe(2+) + protoporphyrin IX. | ||
| Biological process | Heme biosynthetic process | The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors. |
Expression pattern of LotjaGi6g1v0043700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…