Domain Predictions — View

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TIGR00109

Source: TIGRFAM

Description

hemH: ferrochelatase

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0004325 View details of GO:0004325 AmiGO InterPro QuickGO	Molecular function	Ferrochelatase activity	Catalysis of the reaction: protoheme = Fe(2+) + protoporphyrin IX.	Subterm of GO:0016829
GO:0006783 View details of GO:0006783 AmiGO InterPro QuickGO	Biological process	Heme biosynthetic process	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors.	Subterm of GO:0006779 GO:0042168 GO:0046148

Associated Lotus transcripts 18

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v1380940.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ferrochelatase-2, chloroplastic-like [Cicer arietinum] gi\|502139638\|ref\|XP_004503842.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1620.10 G3DSA:3.40.50.1400 IPR001015 IPR019772 IPR033644 IPR033659 MF_00323 NON_CYTOPLASMIC_DOMAIN PF00762 PS00534 PTHR11108 PTHR11108:SF5 SSF103511 SSF53800 TIGR00109 TRANSMEMBRANE cd00419 cd03411 mobidb-lite	20
Lj1g3v1785840.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ferrochelatase-2, chloroplastic-like [Glycine max] gi\|356506948\|ref\|XP_003522235.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1400 IPR001015 IPR019772 IPR033644 IPR033659 MF_00323 NON_CYTOPLASMIC_DOMAIN PF00762 PS00534 PTHR11108 PTHR11108:SF4 SSF53800 TIGR00109 TRANSMEMBRANE cd00419 cd03411	17
Lj4g3v2858450.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ferrochelatase [Medicago truncatula] gi\|357520255\|ref\|XP_003630416.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.20.1620.10 G3DSA:3.40.50.1400 IPR001015 IPR019772 IPR033644 IPR033659 MF_00323 NON_CYTOPLASMIC_DOMAIN PF00762 PS00534 PTHR11108 PTHR11108:SF5 SSF103511 SSF53800 TIGR00109 TRANSMEMBRANE cd00419 cd03411	19
Lj6g3v0338480.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ferrochelatase-2, chloroplastic-like [Glycine max] gi\|356506948\|ref\|XP_003522235.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1400 IPR001015 IPR019772 IPR033644 IPR033659 MF_00323 NON_CYTOPLASMIC_DOMAIN PF00762 PS00534 PTHR11108 PTHR11108:SF4 SSF53800 TIGR00109 TRANSMEMBRANE cd00419 cd03411	17
LotjaGi1g1v0328100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ferrochelatase; TAIR: AT2G30390.1 ferrochelatase 2; Swiss-Prot: sp\|O04921\|HEMH2_ARATH Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr\|V7AZZ3\|V7AZZ3_PHAVU Ferrochelatase; Found in the gene: LotjaGi1g1v0328100	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1400 IPR001015 IPR019772 IPR033644 IPR033659 MF_00323 NON_CYTOPLASMIC_DOMAIN PF00762 PS00534 PTHR11108 SSF103511 SSF53800 TIGR00109 TRANSMEMBRANE cd00419 cd03411 mobidb-lite	18
LotjaGi1g1v0328100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ferrochelatase; TAIR: AT2G30390.1 ferrochelatase 2; Swiss-Prot: sp\|Q0DIV0\|HEMH2_ORYSJ Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr\|V7AZZ3\|V7AZZ3_PHAVU Ferrochelatase; Found in the gene: LotjaGi1g1v0328100	Domains G3DSA:3.40.50.1400 IPR001015 IPR019772 IPR033644 PF00762 PS00534 PTHR11108 SSF103511 SSF53800 TIGR00109 cd00419	11
LotjaGi1g1v0328100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ferrochelatase; TAIR: AT2G30390.1 ferrochelatase 2; Swiss-Prot: sp\|O04921\|HEMH2_ARATH Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr\|I1KBS4\|I1KBS4_SOYBN Ferrochelatase; Found in the gene: LotjaGi1g1v0328100	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1400 IPR001015 IPR019772 IPR033644 IPR033659 MF_00323 NON_CYTOPLASMIC_DOMAIN PF00762 PS00534 PTHR11108 SSF103511 SSF53800 TIGR00109 TRANSMEMBRANE cd00419 cd03411	17
LotjaGi1g1v0328100.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ferrochelatase; TAIR: AT2G30390.1 ferrochelatase 2; Swiss-Prot: sp\|O04921\|HEMH2_ARATH Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr\|I1KBS4\|I1KBS4_SOYBN Ferrochelatase; Found in the gene: LotjaGi1g1v0328100	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1400 IPR001015 IPR019772 IPR033644 IPR033659 MF_00323 NON_CYTOPLASMIC_DOMAIN PF00762 PS00534 PTHR11108 SSF103511 SSF53800 TIGR00109 TRANSMEMBRANE cd00419 cd03411	17
LotjaGi1g1v0328100.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ferrochelatase; TAIR: AT2G30390.1 ferrochelatase 2; Swiss-Prot: sp\|O04921\|HEMH2_ARATH Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr\|I1KBS4\|I1KBS4_SOYBN Ferrochelatase; Found in the gene: LotjaGi1g1v0328100	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1400 IPR001015 IPR019772 IPR033644 IPR033659 MF_00323 NON_CYTOPLASMIC_DOMAIN PF00762 PS00534 PTHR11108 SSF103511 SSF53800 TIGR00109 TRANSMEMBRANE cd00419 cd03411	17
LotjaGi1g1v0366200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ferrochelatase; TAIR: AT5G26030.1 ferrochelatase 1; Swiss-Prot: sp\|P42044\|HEMH_CUCSA Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr\|I1JTV8\|I1JTV8_SOYBN Ferrochelatase; Found in the gene: LotjaGi1g1v0366200	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1400 IPR001015 IPR019772 IPR033644 IPR033659 MF_00323 NON_CYTOPLASMIC_DOMAIN PF00762 PS00534 PTHR11108 PTHR11108:SF4 SSF53800 TIGR00109 TRANSMEMBRANE cd00419 cd03411	17
LotjaGi4g1v0415800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ferrochelatase; TAIR: AT2G30390.1 ferrochelatase 2; Swiss-Prot: sp\|Q0DIV0\|HEMH2_ORYSJ Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr\|G7LGG4\|G7LGG4_MEDTR Ferrochelatase; Found in the gene: LotjaGi4g1v0415800	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1400 IPR001015 IPR019772 IPR033644 IPR033659 MF_00323 NON_CYTOPLASMIC_DOMAIN PF00762 PS00534 PTHR11108 SSF103511 SSF53800 TIGR00109 TRANSMEMBRANE cd00419 cd03411	17
LotjaGi4g1v0415800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ferrochelatase; TAIR: AT2G30390.1 ferrochelatase 2; Swiss-Prot: sp\|Q0DIV0\|HEMH2_ORYSJ Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr\|A0A151SU66\|A0A151SU66_CAJCA Ferrochelatase; Found in the gene: LotjaGi4g1v0415800	Domains G3DSA:3.40.50.1400 IPR001015 IPR019772 IPR033644 PF00762 PS00534 PTHR11108 SSF103511 SSF53800 TIGR00109 cd00419	11
LotjaGi4g1v0415800.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ferrochelatase; TAIR: AT2G30390.1 ferrochelatase 2; Swiss-Prot: sp\|Q0DIV0\|HEMH2_ORYSJ Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr\|A0A151SU66\|A0A151SU66_CAJCA Ferrochelatase; Found in the gene: LotjaGi4g1v0415800	Domains G3DSA:3.40.50.1400 IPR001015 IPR019772 IPR033644 PF00762 PS00534 PTHR11108 SSF103511 SSF53800 TIGR00109 cd00419	11
LotjaGi4g1v0415800.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ferrochelatase; TAIR: AT2G30390.1 ferrochelatase 2; Swiss-Prot: sp\|O04921\|HEMH2_ARATH Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr\|K7KRA8\|K7KRA8_SOYBN Ferrochelatase; Found in the gene: LotjaGi4g1v0415800	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1400 IPR001015 IPR019772 IPR033644 IPR033659 MF_00323 NON_CYTOPLASMIC_DOMAIN PF00762 PS00534 PTHR11108 SSF103511 SSF53800 TIGR00109 TRANSMEMBRANE cd00419 cd03411	17
LotjaGi4g1v0415800.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ferrochelatase; TAIR: AT2G30390.1 ferrochelatase 2; Swiss-Prot: sp\|Q0DIV0\|HEMH2_ORYSJ Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr\|G7LGG4\|G7LGG4_MEDTR Ferrochelatase; Found in the gene: LotjaGi4g1v0415800	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1400 IPR001015 IPR019772 IPR033644 IPR033659 MF_00323 NON_CYTOPLASMIC_DOMAIN PF00762 PS00534 PTHR11108 SSF103511 SSF53800 TIGR00109 TRANSMEMBRANE cd00419 cd03411	17
LotjaGi6g1v0043700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ferrochelatase; TAIR: AT5G26030.1 ferrochelatase 1; Swiss-Prot: sp\|P42044\|HEMH_CUCSA Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr\|A0A0B2RCX6\|A0A0B2RCX6_GLYSO Ferrochelatase; Found in the gene: LotjaGi6g1v0043700	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1400 IPR001015 IPR019772 IPR033644 IPR033659 MF_00323 NON_CYTOPLASMIC_DOMAIN PF00762 PS00534 PTHR11108 PTHR11108:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53800 TIGR00109 TRANSMEMBRANE cd00419 cd03411	21
LotjaGi6g1v0043700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ferrochelatase; TAIR: AT5G26030.1 ferrochelatase 1; Swiss-Prot: sp\|P42044\|HEMH_CUCSA Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr\|A0A0B2RCX6\|A0A0B2RCX6_GLYSO Ferrochelatase; Found in the gene: LotjaGi6g1v0043700	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1400 IPR001015 IPR019772 IPR033644 IPR033659 MF_00323 NON_CYTOPLASMIC_DOMAIN PF00762 PS00534 PTHR11108 PTHR11108:SF4 SSF53800 TIGR00109 TRANSMEMBRANE cd00419 cd03411	17
LotjaGi6g1v0043700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ferrochelatase; TAIR: AT5G26030.1 ferrochelatase 1; Swiss-Prot: sp\|P42044\|HEMH_CUCSA Ferrochelatase-2, chloroplastic; TrEMBL-Plants: tr\|A0A0B2RCX6\|A0A0B2RCX6_GLYSO Ferrochelatase; Found in the gene: LotjaGi6g1v0043700	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1400 IPR001015 IPR019772 IPR033644 IPR033659 MF_00323 NON_CYTOPLASMIC_DOMAIN PF00762 PS00534 PTHR11108 PTHR11108:SF4 SSF53800 TIGR00109 TRANSMEMBRANE cd00419 cd03411	17

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd03411	CDD	1	5.56