Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0055300 |
| Transcript ID | LotjaGi6g1v0055300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutamine synthetase; TAIR: AT5G37600.1 hypothetical protein; Swiss-Prot: sp|Q42899|GLNA1_LOTJA Glutamine synthetase cytosolic isozyme; TrEMBL-Plants: tr|Q84L17|Q84L17_9FABA Glutamine synthetase; Found in the gene: LotjaGi6g1v0055300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:9966908..9972553) extracted from Lotus japonicus Gifu genome v1.2.
AAATCATTTTAATCATTCTCATCAGGATTTCTCTCTCTCTCTCTCTTGTTGTCATCTGTAAAAAGACCCCACCAACCATT TTCCAATTAGAATCCACTCAATCCAGCTAGGCGAAGCCACTATAAAAGCTTTACCGGAGTTCACGTTTTCCTCAATATAT TGAATCTGACGAGGATTCGAAGAGAAAGAGAGAGAAAGAAGAAGAAGAAGAAGAAGAGTCTTCGTTTTTGAAGATGTCGC TGCTTTCAGATCTCATCAACCTCAACCTCTCTGAAACCACAGACAAGATTATCGCTGAGTACATATGGTTAGTCTCTCTC TCAAAGACTCGTTGTTGTTGTTGTTGTTTTTGTTCTGTACGTACAAGCAAACATAGCATGGATTTTACGTGTGTTGGAAC GTTTTTGTTGAATGATTATCATGATGATGATGTCTTTTTGTGATTGATTTTGTTCTTTTGATTCATCACTCTGTTTTGTT GATATGAGAGTCTTGAAATTCATACTATCTCACTATTATGAGTATAATCACATGAGAAATCACTGATTTCCTCTGTTTTG ACTCTGGCTTTTGGTGGTGTTTATGGTTTGATTTCAGTATTTTTTCAATCAAAAGGCTACTTTGCTTGTTTGTATGCAAT AAATTGAAAAAAGGAAGACCCTTTTTCCCTTTTTTGTTTTTTGCCTGTTAGCTGTTTGCTTTATATCCAATACTACTCAA TCCCAAATGATTTTTTTAGCTTCTTGTACCTAACTTTTTTATATCAGATTTTTCTCTCTTGATTAATTCTAACTTGCTTT ACTTTCACTATGGTAGGATTGGTGGATCAGGTTTGGACATGAGGAGCAAAGCAAGGGTAGTTATTTGATTCACTACTTGT AGCAAACTAGAAAATAAGTGTTTTTTTTTTTCATTTTGACTAATGGGACCCTATAATGTTTTTGGTGTATAGACCCTCCC AGGACCAGTGAGCGACCCTTCACAACTGCCCAAGTGGAATTATGATGGTTCCAGCACAGGTCAAGCTCCTGGAGAAGATA GTGAAGTGATCTTATAGTATGACTCTTAAATTTTAATCTTTTTTTAGTTTTCCTCTTAACCTGTACAAGTATGTATGTGA ATCTTTGTTTTCCATTTTCTTGGATATTGAATTCTGTGCTTATTTGGGCTTGTTTCAATACAGCCCACAGGCCATTTTCA GAGATCCATTCAGAAGGGGCAGCAATATCCTGGTGAGATTTTTGGTCTAATGTGCCATCTCTGTTTAATACAACCTGTAG CATGTTTAGTTTTGGAATTTCTTCCGTCAGAGAATTCCTAAATTTACACCGTCATAGAATCTGACATGTTAGATCAAGAT CAGAGTTCAAATATATGAGCCGACTGTTCTTGATCAAACAGTTAAAATTTACTTTACTAAAATGTAGGATTGCCCAAACT GCAAGAAGCTGAAATCCTTAAAATCATTTCTGATTAGAAGCTATTGAGTATTGGCTTCTAAGTGTCTTGGATTATGAGCA AATCGCGAAACCAAACATGTACTTTGGTTTTCCTCATGTTTATGCATGTGAACCTTTTTACATTGTGTAATCCTATTTTG TTTTTGAAACCCAATTTCTTTTAGGTTATCTGTGATGCATACACTCCTGCTGGAGAACCCATTCCCACTAACAAGAGACA TGCTGCTGCCAAGGTTTTCAGCCATCCTGATGTTGTAGCTGAAGTACCCTGGTATTTATCTTTTGTTGCTTCATTGCTGA TTGTAATAACCTTTTTGCCACTAGTTTCTGCTTTCATGACTAAGAACTGCTTTGTGATTGTGTTATTAGGTATGGTATTG AGCAGGAATATACCTTGTTGCAGAAAGAGGTCAACTGGCCTGTTGGGTGGCCTATTGGTGGTTTCCCTGGACCACAGGTG AAAACTCATATTCACAGTTTCACCTTTGTTCTTATTTTTTTAACAGTTTTGTTACTTTACCCATACAAACTCATGTGGTC CATTTCACACATCTACCAAAGCAAACAGTCTGGTTTTTTTTATTGTATCATCATATGTGGATGAGTTGTCTTTTGCCACA TTTGGGGTGTTAGTGCATATTTATAAATCATTCTATAATCAATTTTTGTATTTTATGGTTTTTAGAATTGATTATGTAAA AAGAGAAGTCGATCCAAACATGTTACTAGCATCAAATTTTACTCATATTGAGACTCTGGTTAGTAGCCACTTAAAAATAT CAGTACATATCACTTAACCTGAGTTGTTTCAATTTTGTTTGCCCCATAACATTTTTTATGATTGATGATGACGATAAAAT CCTCTTTTTCTACAAAGTGAGATTGGCTATATGAATCGCTTGACCTAAGATACACCTTGGTTTTACCTTGGTTGCCGCAA GTCTAACAAAATCCTCCATCTTTTCCCGGGCTTGAGACCGGCTAACCATCAGCACAGGGGTAGATTTTTTTATTTTTTAT GATAGATGAGATGACTAACCCAATTTAAGCTTTTCTTTTGAGTGATTTTCTTCAAGAGTCATTGTTTTCTTTTGTTATAG CTTACATGCATTCAATTTTATTTGGAAATAACATCTTTCTTTTTCTTACTTGATGAGCAGGGACCATACTACTGTGGTAT TGGAGCTGATAAGGCTTTTGGCCGTGATATTGTGGACGCACATTACAAAGCCTGCCTTTATGCCGGTGTGAACATCAGTG GAATCAATGGAGAAGTGATGCCTGGCCAGGTAAGTTGGAACAGCTTAGCACTTAGTTTTGTGCTCATAATTATTTACCCG CTAGCAACACTCACTTTCCAACACTTACTTATTGGTTCGTTGAAATTTATATAGGGCCCACTAAACATATGGGTCTGGCG TCCAAATTTATGGGGCTCACTTAAATTTCAATTAATCTAAGTGTTGGAAAAGATGATATTACAGTGAGTGTTACTAGCAC TCGTCTTACCCTACCCTAGTATTCTAATTTTTACTTTTGTTACAAATATTTTTTAATCAACACATACTTGTTGCAGTGGG AATTCCAAGTTGGCCCTTCAGTAGGTATCTCAGCTGGTGATGAGGTGTGGGTTGCTCGTTACATTTTGGAGGTAGGTGGC ACATGACTACTGCTATTGTCAGCATCACCTATTTAAACTAATTGTATGATTCTCCACCTAACTTTCTTTTGTTTCTGTTT AAACAGAGAATCACTGAGATTGCTGGGGTGGTCCTTTCCTTTGACCCCAAGCCAATTAAGGTTGACATTTCTTCCACCTT TTAACATCAAGTTACATTTTTTCCAACCCCTTTACTCTCTCATTGGCTGAATCTATCAGAAAGTCTTAAGGAATTTAAAA TTTTGAAAAATTAAATTGATGTGTTCCCCTCCACAAATACATAACCTTATTAAAATCGATTATTCAAACACACTTTGTTT TTGCTGTTGAATTGGTGTTGACTTGGGTTATTATTACAAAACCAGGGTGATTGGAATGGTGCTGGTGCTCACACAAATTA CAGGTAATCTTTGTTACTTTTTAACAAAAAGACCAAATTTAACCCTTTTTTGCTTTCATGCTTGACAAGTGCTTAATAAT GTTCCAGCACTAAGACCATGAGAGAGGATGGTGGCTATGAAGTGATCAAGAAAGCAATTGATAAGTTGGGGTTGAGACAC AAGGAGCACATTGCTGCTTATGGAGAAGGCAACGAGCGTCGTTTGACAGGAAGACACGAGACAGCTGACATCAACACTTT CTTATGGGTAAGCAAGAAAATGGAATTTTCGATTCCTTGCGGGTAAACATTGATTTTCTCATTGTTGACTTAATGCCGAG TTTTCACGGTTTGTGTTATTTGACTTGTGTAGGGAGTTGCAAACCGTGGTGCTTCTATTAGAGTTGGGAGGGACACAGAG AAAGAAGGGAAGGGTTACTTTGAGGACAGAAGGCCTGCATCTAACATGGACCCATATGTTGTCACTTCCATGATTGCAGA CACAACCATTCTCTGGAAACCATGAGCCAATGTTACAGGACCATTTGCTGCATGCCTATGAAAGTCATGGTTGTTTCTAT TTCCTGATTAGGATTTGGTCATTGGTTTTTATTGTCTTTTCCATAATTTTACTTTTGTGTTCTTGTTATGGCTGGCACAT GGTGTGAGGCCTTGTTTGTTGGTACCAACTACCAAGGCTAGTTCATTGCTTGCTATTTCTCTCCCTCATTTTCTGATTTA AGCATCAAAATAATAATGTTATGGTTATCAATGAAAAAGATGATTGTCGAGTATATGAATAATATATGAAATTGACATGT TCATGGTTTGGTGTTGATATTTTTGTTGATCGAGGATTCATTGAATAGAGTCAGTTCGGATGATTGTTAGAAAGTATGAA AACAAGAAAATAATACATTTTTGCATTGTGGGATTGGGTTTTGTTAGCTAGAAACAATTGGGGTTGCTGCCGGCAGAGGG ACATGTGAGACTACTGGGGTTGTTGGATTGCATTTGTGACGACAAAGAAGGGAAGGAGAGGAGATTGCTAAAAGGAATGC TCAGACTTAGCCTCTTGTGATCAAGAAGGTATTGAGTGTCGCATTTAGCTTAAGTTTTGCTGTCTCTGTTCTTACTTCTT AGGAACAGTAACGAAGCTTGGATTTTTTGGAACGTGGGGTCAGATCAAACGATTATGAGTATGTTCGAATACGCAATAGA AAATCACGAAAAAGTTAAAATTATAGTGAATAGAAGTGAAAATTAAAGGAAATTGCAACTTTCCACCATAATTTTGGCTT ATCATAATTTTTTATTGTGTGTTCAATTATGCAGTGACTTAAAAGAAAAATAATTTCAGAAACACAACATGTGCAAATCT TTTGAGATGTTTGAACTTTGAAAACATGTTTTTATTTGATGGGAAAAATCCAAAAGATGTGACACACATTACACGTTAAT GCTTATATTTGATCGAAACCGGAAAATATCCTCTAAAAATGTAATATAAAAGTAGCAAATGGTAAGAATATTAATTAATC AATCATAGTAACGAGCAACATTAGACCAGAAGAGAAGCCAGCCCAGTGGTAATCTATGTTGTTACTAGCTCTGGTGCAAT TGCTTCAATTCCTGGCAGAAGTTGTTTGTTACATTTTTATCAGTTGATCTCCTTTTAGTCAGATTGGTCATGCAAACGAA CTGGTGAGAACGGTCAGACTTAGCCGGTATATACTAAAACTAGTGTTCGACTGACTATTGGTCGCACTCAACGGGTTTCA AATGACTTTGGAGTAAAATAATTATAACAGCAATATTTCAAATTAAAATATACCAATATCAAGGGACTGTTTGGTTTGAA AAACTCTTTTCATTTTTAAAAAATTGTTTTTATTTTCAATTCTCTACAAATTTAAAATAGTGGTTTATTTTTGTTTTCTA TTTTCATCGCCACCACCAACATTGCATATATAACAACATAACACTAGTTTCCTTTCAAAAAAAAAACATAACACTAGTTT CAAAAAAAAAAAAACAACATAACGCTACTTTTTTTTTTGCTCAACATAACACTACTAAAAAAGTCAAAAGTGGATATAGT GGCCCAAGTGATTAAAAGAATAAATGACCAATTAAGTAAAAAAACG
CDS sequence (LotjaGi6g1v0055300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGCTGCTTTCAGATCTCATCAACCTCAACCTCTCTGAAACCACAGACAAGATTATCGCTGAGTACATATGGATTGG TGGATCAGGTTTGGACATGAGGAGCAAAGCAAGGACCCTCCCAGGACCAGTGAGCGACCCTTCACAACTGCCCAAGTGGA ATTATGATGGTTCCAGCACAGGTCAAGCTCCTGGAGAAGATAGTGAAGTGATCTTATACCCACAGGCCATTTTCAGAGAT CCATTCAGAAGGGGCAGCAATATCCTGGTTATCTGTGATGCATACACTCCTGCTGGAGAACCCATTCCCACTAACAAGAG ACATGCTGCTGCCAAGGTTTTCAGCCATCCTGATGTTGTAGCTGAAGTACCCTGGTATGGTATTGAGCAGGAATATACCT TGTTGCAGAAAGAGGTCAACTGGCCTGTTGGGTGGCCTATTGGTGGTTTCCCTGGACCACAGGGACCATACTACTGTGGT ATTGGAGCTGATAAGGCTTTTGGCCGTGATATTGTGGACGCACATTACAAAGCCTGCCTTTATGCCGGTGTGAACATCAG TGGAATCAATGGAGAAGTGATGCCTGGCCAGTGGGAATTCCAAGTTGGCCCTTCAGTAGGTATCTCAGCTGGTGATGAGG TGTGGGTTGCTCGTTACATTTTGGAGAGAATCACTGAGATTGCTGGGGTGGTCCTTTCCTTTGACCCCAAGCCAATTAAG GGTGATTGGAATGGTGCTGGTGCTCACACAAATTACAGCACTAAGACCATGAGAGAGGATGGTGGCTATGAAGTGATCAA GAAAGCAATTGATAAGTTGGGGTTGAGACACAAGGAGCACATTGCTGCTTATGGAGAAGGCAACGAGCGTCGTTTGACAG GAAGACACGAGACAGCTGACATCAACACTTTCTTATGGGGAGTTGCAAACCGTGGTGCTTCTATTAGAGTTGGGAGGGAC ACAGAGAAAGAAGGGAAGGGTTACTTTGAGGACAGAAGGCCTGCATCTAACATGGACCCATATGTTGTCACTTCCATGAT TGCAGACACAACCATTCTCTGGAAACCATGA
Protein sequence (LotjaGi6g1v0055300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLLSDLINLNLSETTDKIIAEYIWIGGSGLDMRSKARTLPGPVSDPSQLPKWNYDGSSTGQAPGEDSEVILYPQAIFRD PFRRGSNILVICDAYTPAGEPIPTNKRHAAAKVFSHPDVVAEVPWYGIEQEYTLLQKEVNWPVGWPIGGFPGPQGPYYCG IGADKAFGRDIVDAHYKACLYAGVNISGINGEVMPGQWEFQVGPSVGISAGDEVWVARYILERITEIAGVVLSFDPKPIK GDWNGAGAHTNYSTKTMREDGGYEVIKKAIDKLGLRHKEHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRD TEKEGKGYFEDRRPASNMDPYVVTSMIADTTILWKP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 356 | 356 | 4.0E-248 | – | |
| Gene3D | 1 | 103 | 103 | 2.7E-45 | ||
| PANTHER | 1 | 356 | 356 | 4.0E-248 | – | |
| SUPERFAMILY | 12 | 102 | 91 | 9.81E-18 | ||
| Pfam | 23 | 97 | 75 | 4.5E-10 | ||
| MobiDBLite | 37 | 64 | 28 | - | – | |
| ProSitePatterns | 55 | 72 | 18 | - | ||
| SMART | 103 | 351 | 249 | 2.1E-58 | ||
| SUPERFAMILY | 103 | 351 | 249 | 3.83E-68 | ||
| Gene3D | 104 | 356 | 253 | 1.0E-133 | – | |
| Pfam | 126 | 346 | 221 | 2.4E-14 | ||
| ProSitePatterns | 237 | 253 | 17 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Glutamate-ammonia ligase activity | Catalysis of the reaction: L-glutamate + ATP + NH(3) = L-glutamine + ADP + 2 H(+) + phosphate. | ||
| Biological process | Glutamine biosynthetic process | The chemical reactions and pathways resulting in the formation of glutamine, 2-amino-4-carbamoylbutanoic acid. | ||
| Biological process | Nitrogen compound metabolic process | The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen. |
Expression pattern of LotjaGi6g1v0055300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…