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LotjaGi6g1v0075500.2

Overview

Field Value
Gene ID LotjaGi6g1v0075500
Transcript ID LotjaGi6g1v0075500.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Phosphoinositide phospholipase C; TAIR: AT3G08510.1 phospholipase C 2; Swiss-Prot: sp|Q39033|PLCD2_ARATH Phosphoinositide phospholipase C 2; TrEMBL-Plants: tr|A0A0S3S0S5|A0A0S3S0S5_PHAAN Phosphoinositide phospholipase C; Found in the gene: LotjaGi6g1v0075500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:14287116..14293406) extracted from Lotus japonicus Gifu genome v1.2.

ATTTCATTTATGAACCAAACATTACTATTGTTGTTTGTATTATTCACCTTGGCTTCAACACACTGCATGCCAATAGAAGT GCAAAGCTTCTCACATTTGCAAGATCCTACTTTCCAAAGCAAAATTGAAAGTGCCTAAACCCAAACATCACTCATCAGAT TTACAACCTATCCACATGAATTTCATCAAAAGAGAGCCAAGTGCCCAACATCTCATTGCCCTTCATAGGATTAATCATGG GACCCAAATGAAGGCCCCTCCCATGCATTAGGAATCTAGACACACCTAGACATGACAACAAACCTTTATTTCTTCTTCTT CTTCTTCTCTTATCATTGCCAACAAAACAAGAAACGTATCCATTCTCCAATCCCCAACACACACACACACACACACCTAT ATCATAATTATTACATCTCAACTACCCACACGCCTAAACGTGCTTACCCGTTATTCAGTTAATTAGTTAGTTATATCTTA ATCCTCTTTTTTTCTCTCTTTCTCTAGAGAAGAAGAACAAAGAGTGTCGTGTGTGTGTTTGAAAATGGAAACGAAGAAAC CAATATCCAAACAGACTTACAAATTTTGCTTCTGCTGCCGGCGGCGGTTCAAGCTCACCGTATCGGAGGCGCCGCCGGAG ATAAAAACCCTCTTCCAGAGCTACTCCGATGAGAACGAAATCATGACAGCTTCTCACCTCCGCAACTTCCTCGTTGAGGT GCAGAGGCTTGAGAAGGCCACCGAGGAGGAAGCTCAGGCCATCATCGATCGCCATAAGCATTTGAGTATCTTCCATCGAA GGGGACTCAATCTTGATGGTTTCTTCAAGTACCTCTTCAGTGATGATAATCCACCTCTGTTACCTTCTCTTGGGGTAAAC TAAACCTTGTCTTTTGTTTTGTTTTGATTTATATATCTTTGTCATGTGTAGTTTAGAACATGAGTGAGAGTTCAGAATTT GGTTTTATATGGTTTTCTAATTGTGGATTTTACTAAATTTATGACCCTTTTCCTTTTGTGTTCTTCATAGTACTCATGAT AGTTCTTAACAACTAGTTATGTCAAATTTATGGTGAATATGTAGTGAGTCTGTTTCATTTTGGTGCTAAGTGTGTATTTC TAATCATTTAAGTGGGTGTTGGATAGAACCAATTGTCTATTGGAATTTGTAAATTGTAGACTTGAATCTATAAGGTATAA TATAACAAAGGGTTTTGCTTGGGCCATGTTTTAGATATTGGAAGTTGGGGTGAACCTTGTCTTTTTTGTTTGGATTTGTG TATTGTTGTTCTGTGTAGTTTAAAACATCAGAGACAGCTCTGGACTTGGTTTTATATGCTTTCTAATTGTGGATACTCTT CTTATTAGAGTGGATTTTACCGGATTTAGTACCCTTTTCCTTTTGTGTTCTTCAAACTCATAAATCAATATAGTTCTCAA CAATTAATAATGCCAATTTAAGGTGAGTTTATAGTGAGTCTGTTTCATTTTGGTGTTAAGTATATATTTATCATTTAATA ACTCGTCTGACTATGGACTTATTGGAGCTAATCTACTAGAAAAAAACACTAGATAAGTTCCAATTAATGTTCTTTGGTTT GCATCTGAACGGGTTGTATGTGCATGGTGGCTGAACCCATTTCCTATTGGAATTTGTAAATTGTAGACTTGAAACTATAT GACAAAGGGTTTGGGCTCATTTTGGACATATGAAACTTTGATAACTTTCTGTAGGTATTTGAAAGACTGATATTATGCTT TGTATGGTTGTTTGTGCTTTGTTGTTCTGGTTATCTGTTTGTGTAATTGATATTATTTCTTCTATTGCAGGTGTACCATG ACATGTCTTTACCGTTGTCCCATTATTTCATATATACTGGTCATAATTCCTATCTAACTGGAAATCAGCTTAGCAGTGAC TGCAGTGATGCCCCCATCATCAATGCGCTGGAGAGAGGTGTGAGGGTGATTGAACTAGATATATGGCCTAATGCATCAAA GGATGATGTGGATGTTCTTCATGGAGGGTAAGTTTACTGGTTGAATGATGCTGGCTTTTAAATGTGAATTCAAGTCATCT CCCTTGTTTCTTCATGTGGATGTTCTTCATTTTTTGTTGCAAAGAAATCCATACACCAGTTTCAAAATTTAATAACTTAT TATTCATTTCAGTTATCTTTTTCCACTCTGATCTTATTTCATGATTGTAAGCACCTTGAGAACAAAATTTTGCAGAGGAA ACTATATTTCGATTTGATGAAGCCTTATCCATCTTTTTGCTGATGGCAATAAAATGTTTCATTCTGGCATTGCAGAAAAA TGATATTATTTCACTGTCAATGCCAGAATATCCTTTAATTTCACTAATCCCTGGCAATGAACTTTATACTTCTTTCCTAA ATATGTTGAAATATAGTTCTTTACATATCTATTCTTTATAATGCAGGACATTGACTAGCCCTGTTGCGCTCATCAAATGT TTGAGGTCTATTAAGGATCATGCCTTTCTCGTGTCAGAATATCCCGTTGTAATAACCTTAGAAGACCACCTTACTCCGGA TCTTCAGGCCAAAGTGGCTGAGGTTTGTTACTTGGTGTTCGATTATGATTCAAAATGGTTACAATCTTATAGTTGACACT TAACTGCCCTGTTTACTTTTCAGATGGTCACTCAAACATTTGGGGACATTCTATTTGCTCCTACCTCAGAAAGCTTGAAG GAATTTCCTTCTCCTGAATCTCTTAAAAAGAGGATTATCATATCAACTAAACCACCTAAGGAGTACCTTGAGGCAAAAGA AGAGAAGGAAAAAGAGGAGGAATCACATAAGGGAAAGCCTCCAGGCGATGAAGAAGCATGGGGGAAGGAAGTCCCGAGTT TGAGAGGTGGTACTATAACTGATTACAAGGTCTGAGACTAAGTCAATGTTATATGTAAATTTCCCCAACATTTAATTTTG TTAAAGAGGGAGATTGGTTTATTGCTTTCCTGGCTTACCATCTTTAGCAGAATAGCGGGGATGACGATGTTGATGATGAC GAGGAAGATGATGATGCAGAAAAGTCACGCCAAGACGTATCAGCTGAATATAGAAGTTTAATTGCCATTCATGCTGGCAA GCCTAAAGGCGGATTAGAGGAATGCCTCAAAGTGGATCCTGATAAAGTGAGACGTCTAAGTTTAAGTGAGCTTCAGCTTG AAAATGCTGCTATAACTTATGGAAAAGAAATTGTCAGGTATTTTTCACTGTTTCCATTTGCATGTGCTTGGCTGCTCTCA GTATGATATGAACTGGCTATAACTCTTTTGTAATGAAAGTAATGAAAATGTAGTAAAAATTGACTGTTACATGGGTTTCT ACCTTGACAATGGTTTATTGCTCTCTTGATGGTGCACTGCTATGTGTCTGGCTACTTGGTGCTTACTAATTATCGCACCT ATCTGACAGAGTTCATAGTCATATCATATCATATTAGAAATTTCTGAGTGCATTATGTTTTGGACAGCATATCCAATGGT TTTCTCACTCTTTTAAAATTGAAAAGAATAAAATATCATGAACTTTTGTATTCTATTTAACTTTGAAACAAACTCAATGC TGGATGTGTTGTTTAACTGCAAATGAAAAGAGAAGTATTTATTTCCTGGTTGTTGGCAGGTTTACTCAGCGGAATATACT GAGGGTGTATCCAAAAGGTACACGCATTACCTCGTCAAATTATAACCCATTGATTGGGTGGATGCATGGTGCTCAGATGG TTGCCTTTAACATGCAGGTATTTTCTATTTCTTCCTCCACCCCTCCTTCCCAAACCTGATTTTCTTTTTCTCATTCATTT TTGTATTTGGGGATTTCTTGATTGGTGAGAGGAACTTGGCAAGCACTAATAACTAAGATACAGACCTGTGAAGTCTAGCA CTGTTACAGATTGAAAATATGGGGCGGTAAATTTAAATGATGATTTATTTTTATTGTCATTGTTATTTTAGTTTATGCGT GTTTTTGTTTTGACTTTCCCACCAGTGAGGATGTGAGATTTTGTTTGCTATTACACTCATCTAACATCATGGAGTCTATT ATTGATCAATGATATTGTGATTATGAAAGATGTCCACTAACTAGTTTCAGTTTTGGTGGTTCGCAGGGGTATGGGAGATC TCTATGGTTGATGCAAGGAATGTTCAAAGCCAATGGTGGATGCGGTTATGTGAAAAAACCAGATTTTCTATTAAAAACTG GTCCCAATAATGAGGTCTTTGATCCTAAAGTTCAATTGCCTGTGAAGACTACTTTGAAGGTGAGGGCTTCACTGCCTGGA GATTTGAGTAACTTTTACCATGCCTGAGATTTGACTCTAATAGAGAGTCCATGATTTTCTTACTCTTATTTAGGTGACTG TATATATGGGGGAAGGATGGTATAATGATTTCAAGCATACTCACTTTGATCAATTCTCACCTCCAGACTTCTATGCAAGG GTATGTTAAGATCATCTACTAGATCATTATGTTTCAGTGATAACATCCATATAGTACCTTCCCTGTAGTTCTTATATGAT TGCAATATTGATAACTCTTATGCAGGTGGGGATTGCTGGAGTCCCTGGTGATACTGTTATGAAGAAAACTAAGGCAGTAG AGGATAATTGGTTGCCTTCTTGGAATGAGGTATTCGAGTACCCACTCACTGTTCCGGAATTGGCTCTGCTTCGCATAGAA GTTCATGAGTATGACATGTCTGAGAAGGATGACTTTGGAGGGCAGTCATGCTTACCTGTGTGGGAACTAAGTAGCGGAAT TCGAGCAGTTCCACTGCATTCCCGCAAAGGTGACAAGTACAACCATGTAAGGCTTCTCATGCGCTTTGAGTTCATCTAAT TTTGCGCATCCTTCTACTCCATACTTGTACAGCCGTTATTCATGTGTTATTAAGAATCTGAGTGTATGTAGCTGTGTAAT GTTGTAAATGTTGCTTATTTTGAATGATTTTTTTTTCTTTTGGTATTTACCGGAATGTACAAGGGTGTGAGACTTATCTG CTGTGGTATATTGATGTTGTCTCTCCCGAAGAGTGTGTTTCCATGGATTTTGAATGATGCTTTAAGAAATAAAATGTGTT CACAATGTTTTGTTTATTTGAGCTGATTGCTTTCTAAGACTTTTCCATCTATATAATGTATAAAGAGAGAAATGCGAGCT GCACCTGCACTATTGATATTGCAGTAACCCAATCAAAACATTGATATGATATTAGAAAGTTGTCATGGGTGACTTGGAGA GCTTGGAATTGAAGCTGGATAAGCTCATGGACCAAATTGGTGCCCAAGAACACGCATTGGAAGAGTTGGTGGCAGGCCTT TCCAGAGCCATTTGAGGCTCAACGAAGAAATCAAATGGGACCTGTCACTAGTTCATATGCAAGCAAGTCGACGACGATAC TGAGATATTCCCAAAAGCATTTCACAGTATATGATGGCACAAATGACCGTAGCACTGGCTGAAATGATGTGAGATTTTTC CACAGCCAAAGAATTGTTGGGGAGGGCAAAGTGGGCCTAGTTTCTTTTCATCTCTTGGGGGAGGCCCAAAAATAGTTTGA CCTAATGGAGCAAAAAGAAGAAGAGTTGAACTCTTGGCGCTTCAGTTTCGGCCACCCCTGAATAACAACCCCTTAGTGGA ACTCTCCAAACCTTAAACAAAATGGATATGTTGAGGACTTCTGACCTCAAATCCTCGCGCCAAGTGGACTTGTTCACTGC TCGTTTAAAAGAAGAAATCGAGATTTACATTGAGATGCAACAAGGCGTAAATATAAGGCGTCTCATGAAACTCTACTACC AAAAGTGTGGACAATGGTCATTGCAATGCCCTAACTTGCAATAACCAAATGGTATTGGGAGGCGCCAAGCTAGACAGTGG CAACAACGAGGGGGCTCTTTTTAAAAGGTTCTTACAAGCATAAATGGAAAAAAAAGGAGGGTTAAAGGAATGTGTTACAA GTGCGATTTGTCCTACTCAATAACGAATGATTGTAATAGGCTATTGTGAATTGAGGTTTCAGATTATGAAAGTAGGTTAT AACAGAGCTCAATGGACGATCCTACAATTTCTCTCCATGCTGCCAGTGAAACTCGTGATTTTGAGGTATTTTTAATTTTC AGTAGGATGGTGTTTACCCAGAAATTTGGTAAACAGTTCGAAATCCAAATGTTGATGAAGAGGTTGGATTTTGATCCTCT TTTGGGATCTTTAACCGAAATTAGTGTGTCCGATTGATTGATTGATTTAAA
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0075500.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAACGAAGAAACCAATATCCAAACAGACTTACAAATTTTGCTTCTGCTGCCGGCGGCGGTTCAAGCTCACCGTATC GGAGGCGCCGCCGGAGATAAAAACCCTCTTCCAGAGCTACTCCGATGAGAACGAAATCATGACAGCTTCTCACCTCCGCA ACTTCCTCGTTGAGGTGCAGAGGCTTGAGAAGGCCACCGAGGAGGAAGCTCAGGCCATCATCGATCGCCATAAGCATTTG AGTATCTTCCATCGAAGGGGACTCAATCTTGATGGTTTCTTCAAGTACCTCTTCAGTGATGATAATCCACCTCTGTTACC TTCTCTTGGGGTGTACCATGACATGTCTTTACCGTTGTCCCATTATTTCATATATACTGGTCATAATTCCTATCTAACTG GAAATCAGCTTAGCAGTGACTGCAGTGATGCCCCCATCATCAATGCGCTGGAGAGAGGTGTGAGGGTGATTGAACTAGAT ATATGGCCTAATGCATCAAAGGATGATGTGGATGTTCTTCATGGAGGGACATTGACTAGCCCTGTTGCGCTCATCAAATG TTTGAGGTCTATTAAGGATCATGCCTTTCTCGTGTCAGAATATCCCGTTGTAATAACCTTAGAAGACCACCTTACTCCGG ATCTTCAGGCCAAAGTGGCTGAGATGGTCACTCAAACATTTGGGGACATTCTATTTGCTCCTACCTCAGAAAGCTTGAAG GAATTTCCTTCTCCTGAATCTCTTAAAAAGAGGATTATCATATCAACTAAACCACCTAAGGAGTACCTTGAGGCAAAAGA AGAGAAGGAAAAAGAGGAGGAATCACATAAGGGAAAGCCTCCAGGCGATGAAGAAGCATGGGGGAAGGAAGTCCCGAGTT TGAGAGGTGGTACTATAACTGATTACAAGAATAGCGGGGATGACGATGTTGATGATGACGAGGAAGATGATGATGCAGAA AAGTCACGCCAAGACGTATCAGCTGAATATAGAAGTTTAATTGCCATTCATGCTGGCAAGCCTAAAGGCGGATTAGAGGA ATGCCTCAAAGTGGATCCTGATAAAGTGAGACGTCTAAGTTTAAGTGAGCTTCAGCTTGAAAATGCTGCTATAACTTATG GAAAAGAAATTGTCAGGTTTACTCAGCGGAATATACTGAGGGTGTATCCAAAAGGTACACGCATTACCTCGTCAAATTAT AACCCATTGATTGGGTGGATGCATGGTGCTCAGATGGTTGCCTTTAACATGCAGGGGTATGGGAGATCTCTATGGTTGAT GCAAGGAATGTTCAAAGCCAATGGTGGATGCGGTTATGTGAAAAAACCAGATTTTCTATTAAAAACTGGTCCCAATAATG AGGTCTTTGATCCTAAAGTTCAATTGCCTGTGAAGACTACTTTGAAGGTGACTGTATATATGGGGGAAGGATGGTATAAT GATTTCAAGCATACTCACTTTGATCAATTCTCACCTCCAGACTTCTATGCAAGGGTGGGGATTGCTGGAGTCCCTGGTGA TACTGTTATGAAGAAAACTAAGGCAGTAGAGGATAATTGGTTGCCTTCTTGGAATGAGGTATTCGAGTACCCACTCACTG TTCCGGAATTGGCTCTGCTTCGCATAGAAGTTCATGAGTATGACATGTCTGAGAAGGATGACTTTGGAGGGCAGTCATGC TTACCTGTGTGGGAACTAAGTAGCGGAATTCGAGCAGTTCCACTGCATTCCCGCAAAGGTGACAAGTACAACCATGTAAG GCTTCTCATGCGCTTTGAGTTCATCTAA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0075500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

METKKPISKQTYKFCFCCRRRFKLTVSEAPPEIKTLFQSYSDENEIMTASHLRNFLVEVQRLEKATEEEAQAIIDRHKHL SIFHRRGLNLDGFFKYLFSDDNPPLLPSLGVYHDMSLPLSHYFIYTGHNSYLTGNQLSSDCSDAPIINALERGVRVIELD IWPNASKDDVDVLHGGTLTSPVALIKCLRSIKDHAFLVSEYPVVITLEDHLTPDLQAKVAEMVTQTFGDILFAPTSESLK EFPSPESLKKRIIISTKPPKEYLEAKEEKEKEEESHKGKPPGDEEAWGKEVPSLRGGTITDYKNSGDDDVDDDEEDDDAE KSRQDVSAEYRSLIAIHAGKPKGGLEECLKVDPDKVRRLSLSELQLENAAITYGKEIVRFTQRNILRVYPKGTRITSSNY NPLIGWMHGAQMVAFNMQGYGRSLWLMQGMFKANGGCGYVKKPDFLLKTGPNNEVFDPKVQLPVKTTLKVTVYMGEGWYN DFKHTHFDQFSPPDFYARVGIAGVPGDTVMKKTKAVEDNWLPSWNEVFEYPLTVPELALLRIEVHEYDMSEKDDFGGQSC LPVWELSSGIRAVPLHSRKGDKYNHVRLLMRFEFI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10336
8 595 588 0.0
IPR001192
PANTHER
PTHR10336:SF168
8 595 588 0.0 –
Gene3D
G3DSA:1.10.238.10
28 105 78 5.1E-13 –
SUPERFAMILY
SSF47473
30 107 78 2.18E-14
IPR011992
Pfam
PF09279
32 101 70 6.9E-11
IPR015359
Gene3D
G3DSA:3.20.20.190
110 292 183 1.2E-48
IPR017946
CDD
cd08599
112 434 323 8.34551E-122 –
SUPERFAMILY
SSF51695
113 448 336 3.14E-113
IPR017946
ProSiteProfiles
PS50007
113 257 145 40.708 –
SMART
SM00148
113 257 145 1.5E-68
IPR000909
Pfam
PF00388
115 257 143 2.6E-49
IPR000909
PRINTS
PR00390
118 136 19 1.0E-43
IPR001192
PRINTS
PR00390
144 164 21 1.0E-43
IPR001192
PRINTS
PR00390
241 258 18 1.0E-43
IPR001192
MobiDBLite
mobidb-lite
261 325 65 - –
MobiDBLite
mobidb-lite
261 290 30 - –
Gene3D
G3DSA:3.20.20.190
293 460 168 1.9E-34
IPR017946
MobiDBLite
mobidb-lite
306 320 15 - –
SMART
SM00149
330 447 118 1.5E-65
IPR001711
Pfam
PF00387
359 445 87 2.6E-27
IPR001711
ProSiteProfiles
PS50008
360 446 87 36.844
IPR001711
PRINTS
PR00390
385 406 22 1.0E-43
IPR001192
PRINTS
PR00390
406 424 19 1.0E-43
IPR001192
ProSiteProfiles
PS50004
453 560 108 12.943
IPR000008
Gene3D
G3DSA:2.60.40.150
461 595 135 2.0E-25
IPR035892
CDD
cd00275
465 594 130 2.74903E-35 –
SMART
SM00239
467 575 109 5.0E-12
IPR000008
Pfam
PF00168
467 568 102 1.1E-9
IPR000008
SUPERFAMILY
SSF49562
467 594 128 7.12E-26 –
PRINTS
PR00390
561 571 11 1.0E-43
IPR001192

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004435
Molecular function Phosphatidylinositol phospholipase C activity Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H(2)O = 1,2-diacylglycerol + 1D-myo-inositol 1,4,5-trisphosphate + H(+).
Subterm of
GO:0006629
Biological process Lipid metabolic process The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
Subterm of
GO:0007165
Biological process Signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
Subterm of
Part of
GO:0008081
Molecular function Phosphoric diester hydrolase activity Catalysis of the hydrolysis of a phosphodiester to give a phosphomonoester and a free hydroxyl group.
Subterm of
GO:0035556
Biological process Intracellular signal transduction The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0075500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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