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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0102800 |
| Transcript ID | LotjaGi6g1v0102800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Polyribonucleotide nucleotidyltransferase; TAIR: AT3G23700.1 Nucleic acid-binding proteins superfamily; Swiss-Prot: sp|P29344|RR1_SPIOL 30S ribosomal protein S1, chloroplastic; TrEMBL-Plants: tr|A0A0L9T4A4|A0A0L9T4A4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0102800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:22539240..22549025) extracted from Lotus japonicus Gifu genome v1.2.
CTGAATTCTATCCCTTATATGATATCCAAAATCCAATCCAAATGTTTCGTTCGGATTTCATTTCATTTCATTTCTTGAGC CGAAAGAGAAAGAAGAGAGTGAACTTGTTTTTCTTGAACTCAACAACCAACCAACAAGAATGTCCATCTTCTGTGCTACA CTCGGCTCCTTCACTTCCATCTCCTTCGTCTCACCTTCACAATCCCAATCCGACCCTTCTTCTTCTTCTTCTTCTTCATC TTCGTCTTCTTTGTTCAGTTTTCGAAAATGTCCCCACAAGTTCACTGTAAAAACTCCATGGCTATGGCAGCATCCTCATC ATCACCACTTCCACACCGCTAAAACCTCCGTCTCTGGCAATACCCAGATTGATCAAAACCCGGAAACTGGAATTCTTCGA CGCCCTTCTGTTTCAGACCCACTGCAGGATGACCCTCGTCAAGCTCGGGTTTGTTCAATGCTTATTCTTAATCCTAGATA ACCGGTTTATAATATAATTAAGTCATAGTTATTCTTTGCATGTTGATGTTGTATATTACGATAATATTTTAACCCAACAA CATGTTACTTGAAATGTTAATTATTAGTGATGTTAGTAAATTAATTCTCCTCGGAGTTCGAACCCTGAACCTTTCACCCT TCATCCCACCCAACCCTTATGTTCTAGCTTTTACCACTTGAGCTAACCTCTGGGGACCATGTTACTTGACTTCATGATTG TGGAATGAAAGTCCAATGCATTACACTTGTTTTTTTTTAATGCCAATTTCTAACACTTCATGTTAGTATCTAATACTTAA TTTCTGCAATGAAGTAGAAATTGTCGGATTGGAAGGCGGCAAAGGCATATAAAGAAAGTGGACTTGTTTATAGTGGCAGG GTTGAAGGTTTTAATGGTGGAGGCCTGCTGGTTCGCTTTTATTCTATATTGGGGTTTCTCCCATACCCACAATTGAGCCC AATGCACTCATGTAAAGGTATCATATGTTCATTCTTAGTTTTTCTTCTGGTTTTCCTTTTCTTAAAATGCATGTTTGAAG AGTTTGAAACTTGTGTTTGAACATTATCAAATCTCAATCAATAAGCGCCCCCACAAAATCTAATGGGAATTTTACTTTGG ACGGTGTAGTTTCACTTGTTTGTAAATTAAATAGATTTCCTGCATATTGTTGAGCAAATAGAGGGAGGCCAAAAAGGATG TTGGAAGGTCTTATTAAAAGTGATTTCATGGTCAATTATATTTAAAAAAATGGTTTTTGATCGAACGCGATTACAATGAG ACTGTCTGACCTAGATAGCCGACCTTACTTAGTGGGATAAGACTATTGTTGTTGAGCATTTTTTATGTTAACCCATTTAC CTATTAGCATCATGTTGTTCAACACTCCAAAAATTATATCCTCCTCCTATTCTAGTTTTATCTGTTGTTAAGGTAAAAAC TTGAGTGAGATTGATAACTTGGTAGACCAGTTTGACTTTTGGTTTCATGTGTTCTCTCTTCAGCATGTGCTTCTAATCTG GACTCTGAGTTTTGTGGTCTGTTATCCGCATTGGGGGTTCCAAATCTACATTCAGGTGTCCTGCAAAATGGGACTCCAAC GCCCAAGTTAGTATCAGAGCGTTAGATATAGGGTGATGTCAAAACGACTTACCACACTGACGAAACGGGAGTCGTATTTA TAGAGACTCCTGCATAAGCCTAGAAGATATGCTGGCCTTGGGCGTTTTTACCATTGGTGGGGATGAATCCCCTTTTATTT GTGATGTTTGCAATGTGTACGACTTTCTGCGGAGTGCAATACTCTTGGGCTGGGCTGGGCCGGAACATCTGCCTTTTTCA TATTCTTTGAAGCCGTAATCCATAACATTTATACTCATAAAATATTTCTTGTTTCCCATTGGAGGTCATGTTTATTGATC TTAATCATGCCATTTAATCATTGTTTAGATATATTTAGGTGCTATTTAGTCAAATAGTAGGTGGAGTTGTAATTGCTGAC TAATTATGAGTTTGATCCTTTTTGTGTAGAACCAGAAAAAACTATCCAAGAAATAGCAAAAGGCTTAGTTGGTTCAGTCA TGCCAGTGAAGGTATTCATATTATTTGACTAATGAGTACGTTAATTATTTGATTCTGTGAATCCAATACAATGTGCAAGG CTTCTCTATCTATTAGTCTTGAAGTTGCTGTGTAGAAGAATTATTATTCCCTGAATCGAAAAAATTAATGTATATTCATG CAATACAACAGCCATCTGACTTGAGTCATTTCAAGCACTATTTGAACCTTGAAATATAACAAATTCTAAAGTCCACGTAT CTCTTATATTTGGAAATATCTAGTGCTTCTAGTACATGGTTGGTATCAGAATCCTTTGCTTTACGCTGAATTAAGTTACA ATATATTCAACAATTATGCTAGGTTTAAATGAAGGGGTGTTTTAAATTTATAACGTTGGGAGTTTCTTCTCGTTTTAGGT AATTCTAGCAGATGACGATAAGACAAAATTGATCTTCTCTGAAAAGGAAGCTGCCTACTCAAAATTTTCAAAACAGGTCA AGGTCGGGGACATTTTTGAAGCAAAAGTTGGTTCTGTTGAGGACTATGGTGCTTTTGTTCATTTGCGCTTCCCCGATGGT AACTACTATACCCAGTTCACGTGTTTATCGTTCCTTTTTCACTTTATCATGGAAAAGTTACAAGTAACATCACAGAATGA TGCAGGTCTTTATCACCTAACTGGACTAATACACATCTCAGAAGTGTCATGGGATCTAGTTCAAGATGTAAGAGACTTCT TAACAGATGGTGATGAAGTGAGGGTCAAAGTTATCAATATTGATAGGTGAGATTCCGATTAGTTATGCTTTTTAATGGAA TTTCTATCAACTTTCTTGCTGGTAGACTCAACCCATATTTTAATATAATTTTATCAGAGTTTATTAGTTGCCTATTTTAG TGGAATTAACTATATTGCTTGGTTTAATTATTGTGAAGCTACGTGTTTTCTCTGTTCATCTTATGTTAGGATCTAGTTCC TAGGGATTTCGATTTATTTTATTTCTTATCTATTAAGTTTAGAGTCTATATTAAGAGATCTTTTATTTTGGGCTGGATTA TCTTATAGATTAAGAGTATATTATATTTTAGGAATTATCTTTCATTTTATTAGTTATTATAAATAGGAGCAGAGTCATTA TGAGTTTTTCATGAATTGAATTATTGAGTTGTGAAAGGTTTTTACCTTTGTAAGGGCTTTCCCTTGTAAAAGAAGGTTTT CCTTCTTTGGGTTTCTATTTTAGTAATAGATTCAGTTTTGTTTTATTTTCCAGTTATAAATAATAATAAAAAATACCAAA AATATTCCTTTTTGCTGTTAGGATTTTCCAAATCCCAACATCATACCAACTCCCTTAAATGCTAGGCTGTTGAGTTGAGT GCACATATCATTTTACCTTGTGCTAAAATTTAACTTGTCTTTATAAGTAATGAGGACTTTGGACTAAAGGGTTACTGAGA ATCGACTACCATGTCATAAACTATCTGTTATTATCAAAATTTAAAATTCGAACAAATGAAATAAAGCCTGGTTCTCAAGG CAGGATATCGAAGGTTGTGTTATAGAACCTTGGCATGTCGCGACAAGTTGGAAGGCATGGAGCTGCAGTTGAGAAAGAGT CATAAATTGGCTAAGTCATGATGAAGCTCTGAGGAAATGTTAAGTCGAACCAGATTGAGTGTGGGAGGCTTGGAGTTTTG AGGCAGGTTGGATAGAGAAAGCTTCAACACTGAGACATGTTATCCTAAGTTTTAGGAAGGGCCAGGCAAATCGGTTAGCG AATAAGTTGAGGTCCAAGCACCATGAGTTCGAGGACAAGGTCAAGAAGTTCCACGATCCATACAACACACGATCACATAA CCTGGAAATTCCGCGCACGAACACCATGCACCCACGATGGTGGTAGTTACGGGACGTGGGAACAAAGGAATCAGCCCGAG TCAACGATCGAGTCTTGGATAAACAAACTCGAGGAACACAAGTCATGCAGAAAGAACAGCTTAGATTAAGGAAATTTCTT TTATAATCAGTCTTGTCCGTAGGATTAGTTTTTCAGTTTGAATGTAAGTAGTATAAATAGGCCAATGCAACTTAGATTCA GAGTTGGAAATAGCTTTTTGTTTATTTATCACGCTTGTATTTTAGTTTCTTATGATTTCAAACTTTGTTTCAATTAAAAC AACCACTTTTGATTGAAACACGAGTATGGGTTCACTGGAACCTTGATTTTTTAAGTTTTCATCGGATAGCTAGTCTTGTT CAACCCCAAAACTCTTTTCGAAGCACAAGTCTAGGTTAACCGGAATCTTGACTTTTTGAGTTATCACCGGTTAACTTGGT CGTTTTAATTTGTTTTGGCAAACATACCCTATATGGAACTACACTCCACACACTCAACGCATTCGTCATTGCTTGTAAAC CACCAAATAAAAAGAACCCATTCCCCAGGACCTGATCCAAGTCCTAGATTGCTCTTTGGATCCATTTGTTTGCAAGTGAG TTTTCCAGGCGTAAACACTATCCCAAAAACTTAAGTTGTCAGGTCAAATTCCATGAATATATTTTAAATCTGACATACAT GATGATGACTTTTTTCTAGTTTGCCCCACTTTATCTTTTGTGTTTATATGAAAATCACCTTTTAACTCGTTTAAGTTCTT GCAGTGGAAAGTCTAGGATTACTCTGTCAATGAAACAGCTAGAAGAAGATCCACTTCTAGAAACTCTGGACAAAGTAATA CCTCAGGTTTGTATAAACTATACGTATGCATACGTTGGGATGCAGGTATTTGTATGTGCATGTCTGGAATTTTTGTAATT GAAGCAATTTGATGTTGCAGGATGGTATAGCTGACTCTGATTCTATGAGTGATAGTGGTAGCAGTGGCATTGAGCCCCTT CCAGGGCTTGAATCAATCCTTGAAGAGCTTTTACAGGAAGATGGGTATGTTTCTATCACTGAGAAATATAACTACTTGAC ATACTCACAATGCAAGATACATCCATTCTCCTCCTTATATGGTTTAAATAATTCTTTTGATAAAATGGTAAAACATTATT AGAAAGAAAGGAGAGAAAGTATTTATGGGTCAGGATTAGAGGTCCTACTATTTAGAAATACAAAAACAAGGGCAAACGAA AGAGCTGCAGTTGAAAGTCTAGGATTTAAGGTCCTACTACATATTTCTTTTGCCATACAGGTTTATCTACAACTTGAAGG AATGAAATTTTTGGGCTGAAATAAAAAATACAAATAAAAACAAGTTTAACATATTACTGGCTCTTTAGATTTTGCATGTG ATAATAAGAATTAAAAAGGTCTGACTCATTGATTCTAGGGAATTAATGCTGGAAAGGAAAGAGTATTGTTCTAGATTACA ATGTTATGATGGTGATTGGTTATGATTGGCACACAAGGCAATATAACATTAGTAACAGATGTATTTATTTGATACCAATT ATTTGTAAGTAAAAAATTAGCCTCCCCTCTCTTTCCCTCTAAAAACCATCTCTCAAACTCCCATAGGAAAACTAACTGGG GAAGCACTTTTTGTTGAGAAGATAGTAGAATTGCAGGGTTGGTGGTTTAAGGCATCCGCAGAGAATATTTAAAAAGGTCT TGGTAGAGATAGTGGGTTATAATAAATATAGGTAAATAGTCTTATAGTTGGATGTAGAAAGAGTTCAAGCCAAATTATTA CCAAACTATTAAAGAAGGAATCGGATTTAAATGCTTGAATTGGATTTAAATGGTTTGTCTTAGAGATGATTAGAGATGAT TTATGATAGGTCATTATAACTTAAGGCAATTGGACTCCGAACATTCTCACGGATAAACTATTATTTTCTTCTTCGTCCCA CCCACGTGGGACTTCATTTTAGTTTCAACAATGCGGATTCATATCATGGTTGAATTAAAATCGGAATCAATTCTAACATT TAAAAGTTACTCACATAAGCTTCTTTTCAGAATCTATTTTGACTTTACAATCAATTGTAAAAGGATTTCTGAACATGCAC TATAAGAGCGGGACGTACTATATTTATTCGTAAATAGCGGATACTATGAAAATGTGTTTTTTTCCACCAAAACATGATCC TAAAACTTGTTAGGCTGGTCTCCTTTATCATTACATGTTGAACAATTGGAAAATTCATTGAAAGACTTTTGTGTGGTATG ATGATTCTCTGTGACAGTATATATGATGCAAGAATCAGCCGTCAAGGGTTTGAAAAACGAGTGGTCTCGCAAGACTTGCA ACTTTGGCTTTCTAATGTGAGTTTTCAAAATTCTGATAATTATTATTAATTTTTCTGAATTTTGTCATAGTTTTTTGTCC CCTAAAATTTGAGTCACTCTTTATTATAGGCACCTCCTACGAATCAAAGGTTTACCCTCCTTGCTCGGGCTGGTAGACAG GTAACACATTCACCGGAACTGAATCTAACTAGTTAAAACGAACGTTTTGAATGAATTTGGAAATGAATTACTGAACCGCA AAAGTGTTATATAGTACAAGGCTATATAATAACTGCTCTCATGACAAGACAAGTTATGATGATTAAGTGTAGGTTGGTTC AAATGCAAACATGATTTAACATATCTCAAAATATAACAAAGATGTTAAAATTTCACACGTTGAGTTGAAGGGAAATCCAA ACAGACACTTAGCATATCTATACTCTGCAAGGATCACTTAAACATCTTGGTCATAGTAATGTCATTTAGCATATCTCTAC GCTCTGGAAGGATCACTTTGACATCTTGATCATAGTAATGTCAGATAATTGACATTAATTAGGATAAGTAATTAACATTC AATAAGCATTTCCATTAGGCTTAACGTCATGGGGCCTCTTTATGCTCCTAAGCTGCAAAGCAGGATCATTTTGAATATGT TAATGAAGTTTTGTCCTATGATGTGATATGACACAGGTGCAGGAGATACATCTAACTACATCCCTTGATCAAGAAGGTAT CAAAAAGGCATTACAACGAGTATTGGAGCGGGTCCCCTGAGTTTGAGTTTGATAATCACTACGATTTTGTACAGTCATTC CTTTTTAAGGTTTGAAAAAGACATCACTCACATTCACCATATTTTGTAATGCATTTATATATCCAATGTGATTTGATTAA CTGCAAATAAGTTGTTGTAAAAACACTCTTAATTAGTAACAATTTGCTTTAATTCAGTCATTCAGAATGCCAATACCTTT ACACTAATTAAGATTCTACCAATCCTCTGCAAACTAGGGAACATAATCCGAGTACATGTGCATTTGTAAACACATTGAGG ATGATACATCTATATATTGTATAGCCAATAAAGGGTAGCCATAGGTAAGCAACCTTATATAATATGTCTAAATCATAGTC TGCTGAATGAGAGCTATTATTTTATTGTAAAATATGTCCTCCAAAGGGAGCTTATTATATTATATACAGACAGAAGTCAT AACATGTTATGTTCAAACGAAGACCCTTGTGGCGGATCTGGGAGGTTCATCATGCTTCAGTTCCACCTCCCTGAGTCGAG TCTCAAGGCCCTTACCACCTGCATTTGCCAAAGGGTGAATTCCATGTGTAGGCCCTGTCATGTATTCCCTGTCCTTTCTC TGTTTCTCAAAGTCCACCCCCATACGCTCCGCACAGCCTGCATAGATAGCAATTAAAATCAAAAGGAATGCCAAACATCC TTGCCCAATTAATCATTAAAGTTATAAATAGTTTTTGTCTTTAAGTCTTCTACATTAGTTAAGAATGAGTAATATGAAGA CCATAAAAGTAATGTGATTAATGCCTTAAATTTTAAGATAAATATTTTGTGTCCAAATCTTCTGTATTAGCTTATGATGG AACTTTGCAATCGCTTTCCCCCAACACATTGAAAATCAATTTTTGTTTCAATTATTTTTAAAATAGTCCTGAAATATGAT TTTGAGGACTTGTAAGTTCTCATTTTTCTCATTTCAGTCTTTAGGAATTGTATTCTTCTCTTGGGATTGGTCTTCTTAAT GACAGAAAGATGAAATATTTTGAAAATACAGAGAATGGAGTAAAAAATAAAAACCAAACAAATAATGTAGGGACCTTACA TATTATTTAGAATGGTACCAATATTCACTTTGTCGAAATTGGAGTTCATGTTTGTCGCACGAAATAACTGAAAGTAGGAC TCGAGATGAATATCAACAAATGAAAGTGATATACCAGGAGTATGTTAGTATTTTTCAGAATATATTTAAGTTAAGCCAAA AAAGGAGTGCCAACACCACTTACTATAACACTCTTTTTAGGATTTTCTTTTGGGGACCCAGATTTTTAATGTACTCCATG AGAATGTTTGAAATGGAGTGTTATTTAAGCCATATAGCGTGTAAATAGTTATAGAAAAGCATGGAAAAGGGAATATGTAA CGTACTTTGGACGAGGTGATCATAAACCTGGCCATCTCTAGTGAGAGCCATCATGAGTTGAGGCAACCCGAGTGGGAGAG CATCCCCTTTATCGACTTGCCAGAAATGGTAGACTTTACCATAAGTCTTGCACACTGTCTCCATGTCCTGACGCTCTATG GGGCCGGGGACTTTCGGCATGAAGAGGATGCCGCTCTTGACCTCGTACAAGTGAGAGTGCCACATGCGCTTCTCCTCGTC CGGCAGGGTCAAGAACAGGTTCTCTGAGATGATGTACTCGAGCCCGATGAGGCGTGCGTTCTTGTTCGGGCTGTCGTAGA TGAGGCACTGCCTCATCTCCTCATTCTGGTGGCTGCAGTAGTGGTGTGCCTCCACTTGCCGGGTCATGTCGTGAGAGTAA AAGTGAAACCTATATTAAAGCAATTAGTGGAACATTTTTCCTTCACACCCCGTGAAATAATAGAAACGGATGACATGAAC ACATAATTAATTCACTTTGTCTGTCTAAAAACTGTACAGGAGACATTCTTAACAATCCAAATTTTGGAATAAACCAACCA ACCCAAGTACCCAACCGCACATAATTAATTCACTTTGTTTGTCTATCTCTCTTATATTATACTAGTGTGATGACCCGTGC AACGCACGGAGATTTTAGGTTGTTCAATTTTTATATATATGAATGAATTAAGTTAATTTCATTTAAATTGTGATAGTATG TATCTTTTTTTGTTGTCGAGAAAAACATGATAGTATATATCTTACATGTTAGTTATGTTGTTTAATAGTAAATATTTTCA AGATGTAAACTGGATAATTTACTTAGTGAAAAAGAATAAGTAAATACATGTTCGTTCAATAAAACAAACGTTAATTTTCC TATGCACAAAAAATATACAACAAACATTATCAAAAACTTCCCTTATACATACTTCATTCAAGGTAGAAACTCTATCAAAT TCTTTCATATGTGAGTTTTGTTTCTCTATCTCTCCTTATCTTTCATTTATATCTTAAATTTTCTTATGTTCATTTATTTC ATAAATTTGCGTTAGACACTCAAAGCATAAAACAATTTAAAAATCAGAATTGGTAGGCATTTCTTTTTTATAAATAACTT GGTAGGCAGTTGAATATAAGGTATTTAATTACTGTCTCTCCGTTCCTATATATAAATTCATTTGTATGAAAAACAATTGC TCATAATTAAGTTATTTTAAAATATCAATGGATCATTCTATATTTTTTTTCCAAAATTTTGAAATAATAATTTGGAGAGA CAAATTCATAAAAAATTAAATAAGAG
CDS sequence (LotjaGi6g1v0102800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCATCTTCTGTGCTACACTCGGCTCCTTCACTTCCATCTCCTTCGTCTCACCTTCACAATCCCAATCCGACCCTTC TTCTTCTTCTTCTTCTTCATCTTCGTCTTCTTTGTTCAGTTTTCGAAAATGTCCCCACAAGTTCACTGTAAAAACTCCAT GGCTATGGCAGCATCCTCATCATCACCACTTCCACACCGCTAAAACCTCCGTCTCTGGCAATACCCAGATTGATCAAAAC CCGGAAACTGGAATTCTTCGACGCCCTTCTGTTTCAGACCCACTGCAGGATGACCCTCGTCAAGCTCGGAAATTGTCGGA TTGGAAGGCGGCAAAGGCATATAAAGAAAGTGGACTTGTTTATAGTGGCAGGGTTGAAGGTTTTAATGGTGGAGGCCTGC TGGTTCGCTTTTATTCTATATTGGGGTTTCTCCCATACCCACAATTGAGCCCAATGCACTCATGTAAAGAACCAGAAAAA ACTATCCAAGAAATAGCAAAAGGCTTAGTTGGTTCAGTCATGCCAGTGAAGGTAATTCTAGCAGATGACGATAAGACAAA ATTGATCTTCTCTGAAAAGGAAGCTGCCTACTCAAAATTTTCAAAACAGGTCAAGGTCGGGGACATTTTTGAAGCAAAAG TTGGTTCTGTTGAGGACTATGGTGCTTTTGTTCATTTGCGCTTCCCCGATGGTCTTTATCACCTAACTGGACTAATACAC ATCTCAGAAGTGTCATGGGATCTAGTTCAAGATGTAAGAGACTTCTTAACAGATGGTGATGAAGTGAGGGTCAAAGTTAT CAATATTGATAGTGGAAAGTCTAGGATTACTCTGTCAATGAAACAGCTAGAAGAAGATCCACTTCTAGAAACTCTGGACA AAGTAATACCTCAGGATGGTATAGCTGACTCTGATTCTATGAGTGATAGTGGTAGCAGTGGCATTGAGCCCCTTCCAGGG CTTGAATCAATCCTTGAAGAGCTTTTACAGGAAGATGGTATATATGATGCAAGAATCAGCCGTCAAGGGTTTGAAAAACG AGTGGTCTCGCAAGACTTGCAACTTTGGCTTTCTAATGCACCTCCTACGAATCAAAGGTTTACCCTCCTTGCTCGGGCTG GTAGACAGGTGCAGGAGATACATCTAACTACATCCCTTGATCAAGAAGGTATCAAAAAGGCATTACAACGAGTATTGGAG CGGGTCCCCTGA
Protein sequence (LotjaGi6g1v0102800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSIFCATLGSFTSISFVSPSQSQSDPSSSSSSSSSSSLFSFRKCPHKFTVKTPWLWQHPHHHHFHTAKTSVSGNTQIDQN PETGILRRPSVSDPLQDDPRQARKLSDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEK TIQEIAKGLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGAFVHLRFPDGLYHLTGLIH ISEVSWDLVQDVRDFLTDGDEVRVKVINIDSGKSRITLSMKQLEEDPLLETLDKVIPQDGIADSDSMSDSGSSGIEPLPG LESILEELLQEDGIYDARISRQGFEKRVVSQDLQLWLSNAPPTNQRFTLLARAGRQVQEIHLTTSLDQEGIKKALQRVLE RVP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 3 | 14 | 12 | - | – | |
| Phobius | 15 | 22 | 8 | - | – | |
| MobiDBLite | 17 | 37 | 21 | - | – | |
| PANTHER | 19 | 403 | 385 | 1.4E-171 | – | |
| Phobius | 23 | 403 | 381 | - | – | |
| MobiDBLite | 66 | 103 | 38 | - | – | |
| MobiDBLite | 68 | 86 | 19 | - | – | |
| Gene3D | 108 | 201 | 94 | 5.3E-8 | – | |
| SMART | 116 | 193 | 78 | 0.0018 | ||
| SUPERFAMILY | 117 | 193 | 77 | 1.34E-6 | ||
| ProSiteProfiles | 118 | 193 | 76 | 11.944 | ||
| Gene3D | 202 | 290 | 89 | 4.8E-27 | – | |
| Pfam | 204 | 281 | 78 | 4.1E-17 | ||
| SUPERFAMILY | 205 | 294 | 90 | 2.24E-21 | ||
| SMART | 205 | 281 | 77 | 1.4E-20 | ||
| ProSiteProfiles | 207 | 281 | 75 | 20.134 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of LotjaGi6g1v0102800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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