Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi6g1v0112900.2

Overview

Field Value
Gene ID LotjaGi6g1v0112900
Transcript ID LotjaGi6g1v0112900.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Villin; TAIR: AT2G29890.1 villin-like 1; Swiss-Prot: sp|O81643|VILI1_ARATH Villin-1; TrEMBL-Plants: tr|I1N029|I1N029_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0112900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:26925599..26935005) extracted from Lotus japonicus Gifu genome v1.2.

TTGGATTCCGCATTCCAAACTGCCGGAGCAAACCCGTATCCTTTCAATAATTTTCTTTCAAGTTGTCTTATAATTTGTTA GTCTATTTACTAGGTAATAGTTATCTTCAGGTTTTTTTTTCTTATGCCAGAGAAAATAAGTGGTCAACTTGCATTAGTCC AACCTCAGTCATTGTATGAATGTGTTATCGCTTATAAGAGACAAGAGATCAAGAAGCAATTTCATGTATAACATTGAAAC ACATATCACATTTCTTTGTTCAAGTTCTCTCCTTTACACTTAGCTCTATATTCTTAGAGGCCTAGAAGTTTGGTGTATTG AGAACCAGCTGTTAGTTCCAGTGTCAAAGTCAAACCATGGAAAATTCTATACTGGAAGTGCATACATAGTTTTGAATGTA AGATATTGCTCACTTTATTTCCCTGTTGATCTTTTTAAACACATTATGAAGTTGATGACTGCATCTTAATTAAAGTCCAA AATTTCAAGGAATATCATCATCATCTCTTTTAGAGTTACACTATCCACTTTTGATGTTGATCCTGTTACTTTTGGAGCCA CCTTCACCAGAATAGAGTTTTAGTAATTCCCTATCAGTATGAGCTTCATTTTCATCTAAATTCTCTTGACGTACAATTGA TCTAGACATTTTTACATGTTTGTGGAAACAGGCCGTTTTTCCCAAAAATAGCCCTCCTCAGTATGACATACATTTTTGGT TGGGAAATGATGCAAATAAGGTTAGTATTATTTCTTGTTTTACTGTCTTGATTGCGGTGGTAACTGTTTATTGATGCTAA TTCTCTACAGCAAAGTTTTAAGCTTCATATTCCATTAGTCGGTTAGTCCATTACTTTTTTTTGTCCCATTTGGTTCCCTG TTTTTTGTACTCCTAATGTGGTCCTCCAATTTCCCTAAAACCATTTCATGTCTTATTTTTCCTCCCCTTTATTCTAGTTG TGGTCTAGTTTTTTCCCCTTTTTGTTCTCTCTTGTATTTGGGATTGGAGTACCCCTTGTACTCCCCTTTTAATATTACTT TGGCTTACCCAAAAAAAAAGTCTTATTTTTCCTCATGTTTATTGCAACCGATTTTCCTCTAATTTGAGAAGCAAGTGGAA CTGCATAGAACTGTTGCCTATAAATTGAAGCACATGAGACTGAAATGACTAATTTATTGTTCTTAGATTTGTAAAACTAA ACTTGCTTGATGTGTAATTTCTTTTCATCCAACAGCAAAACAAACATTATGGTTGTGGGTTTGTATTGGCTTATCTAAGA ATTGCTTAACGATTTGAATGTTGTTAAATAGACCAAGGAAGGGTGCTTGAAATATCGGAACAAATATCTATCCACAACAT TTGACTTAAGAGATACATTAAACAATGAACATATATAGTATTTGGTAAAAGTATGAACATTGAAAAATATGATCTGCATT GTTTCACTGGTGAGTTCTGTATTTGCAGGTGGACTCAGGCTTGGCATCAGACAAGGCACTTGAGTTGGATGCAGCCTTAG GATCATGCAGTGTTCAATATAGGGAAATTCAAGGCCAAGAATCACAGAAGTTTCTGTCATACTTCAAGCCTTGTCTTATA CCCATTGAAGGAGTGTTTACTTCAAAGCAAGGAAACTTGAATGGTGAATACCAAGTCATCCTGTACACATGCAAGGGAGA CTATGTTGTCCGTGTGAAAGAAGTTAGTTGTCTCTATGTTTAACTGCTTTTGTTATCTGATAGTATGAATCTCCTTATCT TTATACTTCTCTTCCAGAAAAGTATAGTTATAAACTAGAGCTTATTGTATCTCTGCATAATAGTGTATGCCTTTCTAATA TTTTCAAATGTTTTTTTTATGCCCTGATTTTTACAAAGGGATGGAAAGTTATTGCAAATTTTAGATGATGATGATTTTTT TATGCCAAGACATCAGCCCACATTGTTCTTTTTTCTAGACTTAGCTTTTGGTTGTTTGATATATTACATGTGTTTCTTAT AATCTGTGTCAATGTGTCTTTATGTTCGATTGAAGTTTATCAGTGTAGTATGCCTGATGTGCTTGTATACTTTATTAGGT TCCTTTTCTGAGGTCATCATTGAATCATGAAGATTTATTCATACTTGACACTGCATCAAAAATATTTCTCTTCAGCGGAT GCAACTCTACCATTCAAGAAAGAGCCAAAGCTTTGGATGTTGTCCAGTATATAAAGGAAAATAGGCATGGTGGAAAATGT GAGGTGGCCACAATAGGTTGGAACATGTTCTACTTTTATTAGTTCATATACCTGTTTTATGAGGTAAAGATGTTGCTGAT CACAATTATACTATTGTTGTAGAGGATGGGAAATTTGTAGGCGATTCTGAAGTGGGTGAATTCTGGAGTTTATTTGGAGG TTATGCTCCCATTCCTCGGGAGTCGCCTTCTGTTCAGGAATCTGAGGCTCCATCCATAAAGCTATTTTGGTGAGGCTCAT ACATCTGTCTTTGTAAATGCATCACGACATGTGTTGATATGATAATCCATTTTTGCCCAACTTTATTTCTCTCTTCAACA TCCAGGAAATTTGTATTTGATCAATAATTTAAACTGATTTTTTTTAATGATTTAAAATCTAACTTAATAGCTTCACGATT ATTTGACTAACCTAAGTTATTTTGTTAGTTGGTATATGTTGAGATCCCACATCAATTCGAGTTAAGGTCAAAGTTGAGCC TATACAGACTTTGACAATCCTCACCTTACAAACTAGCTTTTGCTGTTAAGTCAGACCCAATCCAAATCAAGATTGTGTCA AAGCTTATCCTAGATCCGATATTGGGCCACCCACCATTAAGATCCCACGTCGATTAGAAATAAGGTCATAGTAGAATTTA TAAAGGCCCAAGCCAAATTCAATAGTATAAATGGAAAGTGATTTGCTTCAGGCAATGTGTGAGGGAGATATAGCCAAATA GATTTGTTTATCCCAAGAAATACTTTAGTTCCTCTTAGCTGAGGATTTATTGTTTTCACTTCCTTCACAGGATAAATTTA CAGGGAAAACTTTGTCAAACTGGAAGCAATGCCTTGAGCAAAGAAATGCTCGAGACAGATAAGTGTTATATGTTGGACTG TGATGGTGAGATTTTTGTCTGGATGGGCAGGCAGACTCTGTTGACGGAAAGAAGAACAGCAATCAAAGCTGTAGAAGTAA GATTCTCTTGTTTCCTTATGTTTCATGGAAGCTGAGCTTCAGTAAATATCTTAGCTTTACATAGCTCCAAAAGAATGAGC CTTATGCTGATCTACTTATCCCAAACTTTGAGTTATTAACCAAGATCCCACTTACAATCTTCCTTAGAAGTTTTTCCATA TGCTTTGAAGCCAAACTTCTTTCTAGTTTATAGGAATGAAGCCCATTTAATTCTTAGAAAACATAACTGTATAAAAGGGC AGTTACAGAAATTCATGGATTCAATTGTGCTTGTTCATAATGATAGAATAGGATATGCATATATTCATTTCCTGTAATTA AGCAGTTAGATCCCTATAATTATGCATAGATCCCTATACAGGAAATGAATATATGCATATCCTATTCTATCACATAAGAA TTGCATTAAGGGCAATGCCTATGCTCACTACCATCTTCCATTTTATAGGAATTTGTCAGAAATGAAGGCAGATCAATCAA AACTCATTTGACATTTTTATCTGAGGGATTAGAAAGTACCATCTTTCAGTCATACTTTACTAATTGGCCTAAAACAGTGG AGCCTAGGCTTTATGAGGAAGGGCGTGAAAAAGTGGCAGGTTAAATACCTTGTACAAAGTTTTGCTTAAGAAGTGTACAA TAAAAAATCATTCATAGTTCATTTCTTTATATTTGTTTTTTCTGCCTCAGCAATATTCAAGCATCAGGGTTATGATGTGA AAGAGCTTCCTGAAGAAGAGAACGAGCCATCTATAGACTGCAGTGGCACAATAAAGGTAGCTTGCTCGAAACCTAGCTGT TTCTTGTTGTCCTTTGAAAATATTTTCCTTTACCTCTGTTACCTATTGGCTGACTACTGCAATTTCAGGTTTGGCGGGTG GATGGTGAAGAATTCTCCCTTCTTTCTATTACAGAATCTACAAGACTTTACAGTGGAGACTGCTACATAGTACAGTATAC ATTTCCAGGAAATGGAAGGGATGAAACTCTGTTATATGCTTGGATTGGCAGTAGATGTGTAATGGTAAGCACTTGACAAA TATTCTAACATTTATCTTCCATGTTGTACTAGGTTGTTCAATTTTTGTACTCATTGATAAACTCATATTCTAATCTAGTG GGATTAGGCTTGGTTGTTGTTGTTTATAACTTTGAAGTCTCAACACATTACTCCCTTTTTCTCTATGATTTTGGCTTGCA GGAGGATAAAACAGCTGTCATTTCTCACGCGAATACCATGGCTGATTCAGTCAGAACTAATCCAGTTGTGGTTAGTGCTG TTCTTGCTATATACCAACTCTTTCATAATATGTTGATTGAATGTGTGCAATTATCAAATTACTGGTTTAGGAAATATCCG TACAATTTTTATCTTCTCAATATGTGCTAGCTTCTTATTTCCACATTTTGCATCTTAAGCACATTATATAAATGATATTA CATAACTTTCCTGCTTTACTCAATTTACCTCTCATGTATGTCTGTTCAGGCTCAAATTCACGAGGGTAAGGAGCCGGCTC AATTTTTCTCAATACTCCAAAGACTAATCATATTCAAGGTATGTTTCTGTTATAATCTCATTTAAAGGTTTGCATTTAAT ATTAAAAAAGTAGCATGTTCAAAACCCTTTCATTTTCTTCTTGATGTAAGGGGAGAAACAGTCCACAGTATAGGAAGTTT ATAGAAGAAAAAGGTATGGTGGATGAAACTTACAATCAAGACCAGGTTGCTCTGTTTCGAGTTCAAGGTACAAATCCAGA TAATATGCAGGCCATCCAAGTTGATCAAGTATGTTTCACGATTCTGACATTTTATCCGCGGTGGAGCACTTTTTACCTTC ATTTTATATTGTCTCTAATTACAAGAAATATGGACACCACGGCTTTTAGCAAAGCTGTTGAAGCCTTTTAAATATTTTTA ATTAATTGGATCAGTAATTTGTAATTACTGGAAAAATGAACATTCAAACCTGAAAAAGCTCTTGCCACAGTTGGAGTTCC TATTATTTTTCTTTACTAACTGTTTCTGATTGAATATGAATTAAATACTGAAGTCCAACCTATTTTTTGCTACTGTTCTC TATTACGGAAGATCTATTGGCAGTAATATATTCAAGAAATCCTTAGTAATCTTCAATTGTTCATCTATTGGCTGGAAAAA AATAGATGATAATTAGAATAATCCCTTGAAAATAAAATTTCCCATCTGTTTTAGTTGAAACAGTTGGTTAATATTAAGAC ATTTGTGTTGTGTGTATCCCATTTTACTTTTTGATGTACATTTTTGTATAGTTTGTAAGCTTTTATTGACTACGAATTTA AATTGTCATAGGTTGCCACTTCTCTGAATTCATCCTATTGCTACATTCTGCAAACCAAAGAATCTATTTATACTTGGATT GGGATCCTATCTTCAGCTAGAGACCATAATCTTCTTGATAGAATGGTGGTGCTGCTTAATGTATGTCATTTCAATTGATG CCTAAAATTTTTATGCAAATGATGGTCTCTGTGAAGAAAGCATTTAATATTAATTTTGGGTATTTGCATTCATATTAAAT TATATGATAGGATGTGAATGCTTTCTACTTGAGATATTTCTTCTAAAAATTTTAAATTGTATATTATTTCTTCATGCAAC TTGCAGCCAACATGGCTACCAGTATCTGTGAGGGAAGGGAATGAACCTGATATTTTCTGGGATGCTCTTGGTGGAAAGGC AGAATATCCAAGAGAGAAAGAAATTCAAGGATTCATAGATGATCCACATTTGTTTGCATTAAAAATAACCAGAGGTAAGA AAAACACCCTTTTCAGAAAAAGGAATCTAATTCTCACTTGGTTTAGTATTATCCTGGGTGAAATGACAGGAAAGCATGTC TAATTGATGGTTCTGTTTCTCATGCAAATTTATTGGAATTTCAACTCAGCAGACTTCAAGGTATGTAATAATTTAACTAC CTACTATATTCTAGCAACCTTTTAAGAGTCTGTTAACAAAAGTTTTATTGATGATGAAGACAAAGATGAGCTCCAATGTG TGTAGCAATCATAAAAAACATTATCTGCAATGAAAAGCCAAAAGCATCAAGTAGAATTGAGGCCCTTGATTGTTTTTCAA ATAATTTTATGAACTTTGTATTTTGGCTTTTAATTTAACTTTTTCAAGTGCATATATGTGTTGTTGAAAGGGATCAGTTA ACTGTGCTCTTAAATTAATATTTCAGGTGAAAGAAATATACAATTATACACAGGATGACTTAATTACTGAAGATGTTTTA TTGCTTGATTGCCAAAGAGAGATTTATGTTTGGGTTGGCTTACATTCGGTTGTCAAATCAAAACAAGAAGCTCTCAATCT TGGCTTGGTAAATCATCTGCTTTCCTCCTATATTGATCTCCCTAGCCTGTACACTAATTTTCTCATCATGATATCATCAA CACTAGGTCATTTCGCTCATACCGTCCTCATGCCATTTTTTTCAGTATGAGACTTTTTCACTCACATTTGAATTCTGGGC ACTATATATGTGATAACTACTTTGTAGTTTGTACTTTTACTTTTTTTTTTTCCTGCATGATTGGATCTCAGACTCTCTAG AACTCTTTTTTTCCACTGAATCCATTGTTGTTTAATCACTTCACTAGAAATGCCTCTACGCATGTGAAAAAGTCATTGTT TGTGGGTCTAACTGTAATTTAAGAAGAATCAAGTTTGATGATTATTTCTCCATAATTCAATATTCACTAATGGTTTGATA GCAATATGTTTTTTGCTACAATATGTTTTTTCTTACAAATGAAAATTTTAATGAGCAGAAATTTCTGGAAATGGATATCC TCGTTGAAGGTCTATCCCTTGAAATCCCTATTTATGTTGTGACGGAAGGTCATGAGCCACCATTTTTCACTCGTTACTTT TCATGGGATCACTCAAAAGCAAAGGTACTTCTCTTCTCCCTTCAAAGTATTAAAAATTGATCACCATTCTTTGATGCTTA ATTTCAAGAATTATTCAGTGTGATAGTAATGGAATTTTTTAGAGACTAGATTCAAGCCTTTGCCCCCACCTTCCCCAAAA AAATATAGATTGATAGAAGAACTTCTGTCAATAAATTTTTGTTTTGTTATGTCCATCATTTGTTGATTTACCTGTATCTG TTGTGTAACTTGTGCCTTTTTTCAGTTATTGTGTTGTTTGGCTGCCTTTTTGTCACTTCATTTTATAGCACATAATGCAT TAATGCTTTTAAATTAATATGGTAAGTGGAATTTTGTTTAATATAATTTTGCTTATCTGTGATATGAATATTTCAACATG CTGTATCACATGGATACAAAATCATGCCAAAGAAATTTGGAGGGGGATTTGTCACCTTTCTGGTGTTCCCACTTCTCAAT TATAATTGTCATCCATCTTATAATCTATTTTAAGTGAAATGGTATTGTTGCAGATTCTGGGTAACTCCTTTGAGAAAAAG CTTGCAATTCTGAAAGGAGAATCGAAAATTCTAGAAGTAAGTGACTACCTTGGGAGTATTGAGGTTATTTTGAAGTGGCC TATACATGGTTTATCATGTTTCTGGGTGGATTTTGGTCTGATTATTAGAATTTACACAATAATAGTTTCAGAAAGTTTTC AGTTTTGTTCCTTTGTCTTCCATCATATTCTGATCTTTTTATTCAGGGACATAGTAGAATCGCATTGAAAGCAAACTCCA GGGACTCAACTCCTAATGGTCCCAGAAGCTATTCTGTTATGTTCAATGGCCGTGGAAGAAGTAGTTCACCTGTACCTAGT AGTGCAGGCTCAGATTTTAGGCAATCAGGTGATCGGCTTCTATCGAGCCCTTCTCCAGTTGTCAAGAAGCTCTTTGATGG ATCTCCTGCCAATAGCAGTGCTGGTAATAAGATTCCTTTTCATCAACTTATGATTTGAAATTTACTTAGTTGGACAGTTA ACTATAGATCTGTTAATGAGTTCCTCTTTGGAGTTATCTACTATAGAGTTAGGATAGTTGGACAATGTATTCCCCTAGCT CTTGTATCAGTTTGGAACCTAAGTAAGATTGCAATATTAGTCAATGATTCTCTTCGATATCCAAAGTTTAGGGCTAAAAT AACTACCTGAAAAATGGAACTTAATGTGGAGCACTGGATTCTGTTAAGTATCTAGAGTACTGGGTATTGTTTTCTTCAAA GTCGTTCAGTTTTTCATTCTTTTTATAACCTGATCACAGTGGTTCTTTTCATCATTTTCTTGTTATTTTTCTTTAACACC TTTTTTTTCCCAGAACAAACATTGCCACAAGCTGATTCTCCAGCAACAGAACTGAGTTCATCAAATGAGCGTGAAAGTTT CACTCAGAAAGATAGAAATGTGGATGGTGAGAATTTGTTGGTATACCCTTATGAGCACCTGAGAGTGGTTTCTGCTAATC CAGTAACTGGCATCGATATAACCAGAAGAGAGGTACTTCCTGAACTGAAAAAAATCTATCCGCCAGTTTTCTCTCATTCA CTTTGATTTTTCTTTCTGCTGGATGATCATTGAGTAAGACCAATAAATGAAATTGCCAACTCTAGGATAGACAATTATAT TTATGGTCAAGCACCAAACTATGATTTGATAGTTACATGATCCACAAATGTCAGCTACAAACCACATGTAAATTTGATTC TTAAACATAAAGTCAGTGTTTTAGGTCCTATAAGAAGTTTGAGTGGTTTGGTTTATCCTAAGCCTCATTAAATCCATAAG ATTACATGTTGAGTCTGAATCTCACTATATTTAGTTTCAAATTTAATTCTTAACAAACAAATTAAACATCAGATAGAGAA GAGTTCCACATGCAATTGTCGCTTTCTTCTCATGGTGGTGGCTTACTCTCCCAGTCTCCCTTAAGAAACACGTAAGCAAA CACAATCTAACAACTGCAAGTAGTGAGGTTAATTTCATTGCTTCATCAAAATTAAAGAAGTCTGTAATTCATAGATGTTC TAATCATTCCAACATCTTATTTATGTTACTATATATAATATTCTTTCTTTATCTGTACATTTGACTGGAATCTGCACTTT CTGATGAAACCAGACATATTTATCTAATGAAGAGTTCCATGAGAAGTTTGGAATGCCAAAATCTGCCTTCTACAAGCTTC CCAGATGGAAACAAAACAAGCTAAAGATGTCACTTGATCTATATTAG
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0112900.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTCGAGACAGATAAGTGTTATATGTTGGACTGTGATGGTGAGATTTTTGTCTGGATGGGCAGGCAGACTCTGTTGAC GGAAAGAAGAACAGCAATCAAAGCTGTAGAAGAATTTGTCAGAAATGAAGGCAGATCAATCAAAACTCATTTGACATTTT TATCTGAGGGATTAGAAAGTACCATCTTTCAGTCATACTTTACTAATTGGCCTAAAACAGTGGAGCCTAGGCTTTATGAG GAAGGGCGTGAAAAAGTGGCAGCAATATTCAAGCATCAGGGTTATGATGTGAAAGAGCTTCCTGAAGAAGAGAACGAGCC ATCTATAGACTGCAGTGGCACAATAAAGGTTTGGCGGGTGGATGGTGAAGAATTCTCCCTTCTTTCTATTACAGAATCTA CAAGACTTTACAGTGGAGACTGCTACATAGTACAGTATACATTTCCAGGAAATGGAAGGGATGAAACTCTGTTATATGCT TGGATTGGCAGTAGATGTGTAATGGAGGATAAAACAGCTGTCATTTCTCACGCGAATACCATGGCTGATTCAGTCAGAAC TAATCCAGTTGTGGCTCAAATTCACGAGGGTAAGGAGCCGGCTCAATTTTTCTCAATACTCCAAAGACTAATCATATTCA AGGGGAGAAACAGTCCACAGTATAGGAAGTTTATAGAAGAAAAAGGTATGGTGGATGAAACTTACAATCAAGACCAGGTT GCTCTGTTTCGAGTTCAAGGTACAAATCCAGATAATATGCAGGCCATCCAAGTTGATCAAGTTGCCACTTCTCTGAATTC ATCCTATTGCTACATTCTGCAAACCAAAGAATCTATTTATACTTGGATTGGGATCCTATCTTCAGCTAGAGACCATAATC TTCTTGATAGAATGGTGGTGCTGCTTAATCCAACATGGCTACCAGTATCTGTGAGGGAAGGGAATGAACCTGATATTTTC TGGGATGCTCTTGGTGGAAAGGCAGAATATCCAAGAGAGAAAGAAATTCAAGGATTCATAGATGATCCACATTTGTTTGC ATTAAAAATAACCAGAGCAGACTTCAAGGTGAAAGAAATATACAATTATACACAGGATGACTTAATTACTGAAGATGTTT TATTGCTTGATTGCCAAAGAGAGATTTATGTTTGGGTTGGCTTACATTCGGTTGTCAAATCAAAACAAGAAGCTCTCAAT CTTGGCTTGAAATTTCTGGAAATGGATATCCTCGTTGAAGGTCTATCCCTTGAAATCCCTATTTATGTTGTGACGGAAGG TCATGAGCCACCATTTTTCACTCGTTACTTTTCATGGGATCACTCAAAAGCAAAGATTCTGGGTAACTCCTTTGAGAAAA AGCTTGCAATTCTGAAAGGAGAATCGAAAATTCTAGAAGGACATAGTAGAATCGCATTGAAAGCAAACTCCAGGGACTCA ACTCCTAATGGTCCCAGAAGCTATTCTGTTATGTTCAATGGCCGTGGAAGAAGTAGTTCACCTGTACCTAGTAGTGCAGG CTCAGATTTTAGGCAATCAGGTGATCGGCTTCTATCGAGCCCTTCTCCAGTTGTCAAGAAGCTCTTTGATGGATCTCCTG CCAATAGCAGTGCTGAACAAACATTGCCACAAGCTGATTCTCCAGCAACAGAACTGAGTTCATCAAATGAGCGTGAAAGT TTCACTCAGAAAGATAGAAATGTGGATGGTGAGAATTTGTTGGTATACCCTTATGAGCACCTGAGAGTGGTTTCTGCTAA TCCAGTAACTGGCATCGATATAACCAGAAGAGAGACATATTTATCTAATGAAGAGTTCCATGAGAAGTTTGGAATGCCAA AATCTGCCTTCTACAAGCTTCCCAGATGGAAACAAAACAAGCTAAAGATGTCACTTGATCTATATTAG
Download CDS Sequence

Protein sequence (LotjaGi6g1v0112900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLETDKCYMLDCDGEIFVWMGRQTLLTERRTAIKAVEEFVRNEGRSIKTHLTFLSEGLESTIFQSYFTNWPKTVEPRLYE EGREKVAAIFKHQGYDVKELPEEENEPSIDCSGTIKVWRVDGEEFSLLSITESTRLYSGDCYIVQYTFPGNGRDETLLYA WIGSRCVMEDKTAVISHANTMADSVRTNPVVAQIHEGKEPAQFFSILQRLIIFKGRNSPQYRKFIEEKGMVDETYNQDQV ALFRVQGTNPDNMQAIQVDQVATSLNSSYCYILQTKESIYTWIGILSSARDHNLLDRMVVLLNPTWLPVSVREGNEPDIF WDALGGKAEYPREKEIQGFIDDPHLFALKITRADFKVKEIYNYTQDDLITEDVLLLDCQREIYVWVGLHSVVKSKQEALN LGLKFLEMDILVEGLSLEIPIYVVTEGHEPPFFTRYFSWDHSKAKILGNSFEKKLAILKGESKILEGHSRIALKANSRDS TPNGPRSYSVMFNGRGRSSSPVPSSAGSDFRQSGDRLLSSPSPVVKKLFDGSPANSSAEQTLPQADSPATELSSSNERES FTQKDRNVDGENLLVYPYEHLRVVSANPVTGIDITRRETYLSNEEFHEKFGMPKSAFYKLPRWKQNKLKMSLDLY
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11977
1 633 633 7.1E-277
IPR007122
SMART
SM00262
1 70 70 0.0015
IPR007122
Gene3D
G3DSA:3.40.20.10
1 78 78 1.9E-19
IPR029006
PANTHER
PTHR11977:SF25
1 633 633 7.1E-277
IPR030010
Pfam
PF00626
2 40 39 2.2E-4
IPR007123
SUPERFAMILY
SSF55753
2 82 81 3.6E-15 –
PRINTS
PR00597
49 70 22 1.6E-44
IPR007122
SUPERFAMILY
SSF55753
107 249 143 1.96E-23 –
CDD
cd11293
107 206 100 1.70918E-35 –
Gene3D
G3DSA:3.40.20.10
110 222 113 1.2E-22
IPR029006
SMART
SM00262
113 210 98 4.5E-12
IPR007122
PRINTS
PR00597
132 148 17 1.6E-44
IPR007122
PRINTS
PR00597
157 175 19 1.6E-44
IPR007122
PRINTS
PR00597
190 210 21 1.6E-44
IPR007122
SUPERFAMILY
SSF55753
232 333 102 5.38E-19 –
Gene3D
G3DSA:3.40.20.10
237 332 96 2.3E-19
IPR029006
CDD
cd11288
238 329 92 1.24861E-33 –
SMART
SM00262
240 327 88 1.2E-17
IPR007122
PRINTS
PR00597
253 273 21 1.6E-44
IPR007122
PRINTS
PR00597
313 332 20 1.6E-44
IPR007122
SUPERFAMILY
SSF55753
316 438 123 2.01E-22 –
Gene3D
G3DSA:3.40.20.10
333 458 126 1.0E-27
IPR029006
CDD
cd11291
342 440 99 3.75113E-35 –
SMART
SM00262
343 439 97 2.8E-16
IPR007122
Pfam
PF00626
359 433 75 1.3E-7
IPR007123
PRINTS
PR00597
365 387 23 1.6E-44
IPR007122
PRINTS
PR00597
394 413 20 1.6E-44
IPR007122
MobiDBLite
mobidb-lite
475 519 45 - –
MobiDBLite
mobidb-lite
475 566 92 - –
MobiDBLite
mobidb-lite
533 557 25 - –
SUPERFAMILY
SSF47050
564 635 72 1.18E-22
IPR036886
ProSiteProfiles
PS51089
570 635 66 19.705
IPR003128
Gene3D
G3DSA:1.10.950.10
573 635 63 1.0E-19
IPR036886
SMART
SM00153
600 635 36 2.6E-13
IPR003128
Pfam
PF02209
600 634 35 2.0E-14
IPR003128

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003779
Molecular function Actin binding Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
Subterm of
GO:0007010
Biological process Cytoskeleton organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures.
Subterm of
GO:0051014
Biological process Actin filament severing The process in which an actin filament is broken down into smaller filaments.
Subterm of
GO:0051015
Molecular function Actin filament binding Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0112900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…