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LotjaGi6g1v0139200.3

Overview

Field Value
Gene ID LotjaGi6g1v0139200
Transcript ID LotjaGi6g1v0139200.3
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Uridine kinase; TAIR: AT4G26510.1 uridine kinase-like 4; Swiss-Prot: sp|O65583|UKL4_ARATH Uridine kinase-like protein 4; TrEMBL-Plants: tr|I1KYV2|I1KYV2_SOYBN Uridine kinase; Found in the gene: LotjaGi6g1v0139200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:40438553..40445732) extracted from Lotus japonicus Gifu genome v1.2.

GGTAGGTGAAAGTGATAAATTTGTAGAAAATAGTAAAATACAGGGTCCATTTATCCAATTTTCCAACCACGAGTAGATAT AAACCAAACCGATATAAAGAGACAACACATAAGCTTTCGTCAATGTAATGTGTACGTGTAGTTGACATGTACATACACTC CGTACTCTGTGTCTCTCTGCAATAACTCTCACCTTCTTCAATTTCAGTTTTCTTCTTCACACAAGTTCTTGTGTTCACTT CACCAGGTACGTTTTGGAACCAACACCCTTTGACTGTTCGGTACAGCAATCCTTACTATGCATTGCTTGGTTTTTGTTTG GGATTCTATTTTGATCAAATTTCCAATCTTTTTTATTTATTTTTCTGTTTCTTATTGGATCTGGAAAACCCATTTGAGTA CTAAGGTTGTGGTTGCTGGGGTGTGTGTTATTTGTAAAGTGTTGAAGTGGGTGAGCATAAAGTTGGATTTTTTGTAATTT CTCTTTTTGGCGTTCTAGTTGCATTTGAAGGAGCTTGCTGTTTTGTTTTTGTCTATGATGTTTTATTCACTTGGTTCTTG TAACTGGAAAATCATTGTGGACTACTACTTTGCTGGGAGGATTGTCATGAACTACTATGATCAATTGATAGTTGAATATA TCATATATGATGCTTTGGACTACTTTGTTTGATACTGATAGATAAAGGGAAAATGAAGTTGGGTTTAAATTTGTGTGTTT TACTTAAAGAATTTGAGTGTTTTGTCTAGTTGTAAAGTTGTGGTGAAGATTTAAGACTTGGGAGGTCTCAGAAGCCTTTG CAGTATTTCCTAATTCCTAGGTGTGCTTTGAGCAGCCTCATTTAATTTTTACCATAGCCTGTGACCATGTATTGTAAGAA AATTACCAGAGCTTGAATGGGTTTTCCACAATATCTCAATGTGCAATGGCTCCGGAAGACAAAGAAGTAGCATGCTACTT CAGGCTAGTTTAGTCAATGTCAATGAATGGTTGTTTATCAGAACTGAATTGTAACCTAAAGCACGAAAGAGTGAAATGTT TTACTTGATTCAATCAAACACATTGGCAAGCTGTGTATGAACTCTCCGTAATGTGAATGCTTTTACATGGTTCCAAGCTA TGTATGAACTCTCTGTATCCAGATTTATTTCTCTTATCTTCATGATTTTTAACCGTTTTATTTCCAGGTCTTTGCCAATG AATGCTAAGTCAGCTTTAGATTTAATGGAGTCTTCATCAGAAGTTCATTTTTCGGGATTTCACATGGATGGTTTTGAGAA AAGAGAGGCCAACACTGAACAACCAACAACATCGGCAACTGACATGTATAAACAACCTTTCATAATAGGTGTGTTTTCTT ATGGCTAGCAGCTAAAGTATTAGTAGTAGTAGTAAAGTCACCACCAACTACCTATTTGGGTCCTTAGAGGTGCTAGAGAC TATAAATCATAAATGGATTGGGTTCTGTTCTGCCAAAGAAAATGTTACCAGCTCTGTTCTTTTTCACTTTGGATGTATTT CACATGAGCCATTAAGTTGTGTTGACTGTTGAGTGTACTTGAATAAAATTCCTGTTGAAGAGCACCACAGAAAAATAACC TAACCGAGGTCTGAATTTATGTTCAACACAAGTTTAGTTGAAATAATAGAATTTATTTGCTGGAAATATATGTTTCTTTG AAAGAAAAATAACCTACTGAGGTCTGAATTCATGTTTGCAGTGAAAAGAAATACTTGAGCTTTTAACAATTTACATGAAA TTAAATTACTTAGCAGTTTATAGAGGTGTTCATATGCTAACATCATAATTTCATTTCACCTTATATCCCATTACACTGTC ATTTTATGCTACAAATTCTGTCAACTTATATATCATCTTATGTTTATAAAGTAGAGCTTCCTGCACAATAAGTTAGGATG CCTTGTTTTCAATCTCATAACTTGTTTCATCTTAATGATTCTAATTTTATTTTCTAATTTTTGTTTTATGCTACAGGTGT TGCTGGGGGTGCTGCATCTGGCAAGAAAACAGTTTGTGACATGATTATTCAGCAACTTCATGACCAGCGAGTTGTCCTTG TTAATCAGGCAATGCATTCTTCCTATTTATACTTGCTGGTGGTCTAATTGAGAATGTATTATGATTTACTGTTTGTGACT CAAAATGATCATCGAGGCAAACAATCAGTCGGTTAGTTCTTCAAGCCTCTAGCATCCTGTTCTCTAAGGAAAACAATCAG TCTTTTACTATCTTTATTTTCAATTTTATGGTAAAATAGACACCTTGACACCATAATGCATCACCCTCTTTTTTTATGAT TAGTTTTGATATTGTGTCTTGCTTCTGCCAAACCTCCTCTTGTATTAATAATATTTACCTCTTTTTCTCAAATTTCCCTT CAAAATGTCATAATATGAAGTTTGTATACCTTTATTTTGGGTAACATAGTTGAAAAATATTCTGAATGTCTTTTCTTTAT CATTCATTATATTTTCTTTTCTCCCCCCCCCCCCTGGTTTATCACTTCTATTAATTGTTTCTTTCTTCAGTTTGTGTTAT TTATCTTTTCTGGATCATATTTCAAAGTATGGACTAAATGTTTCTTATTGCACGTCCTGATACATTTGGGCTTAATAGAT AAACTAATTTATTTATGACAGGATTCCTTTTACAATAACTTGACTGAGGAGGAAGTTACAAGAGTGCAGGATTACAATTT TGACCATCCTGGTCAGTACAATTATACTTATTCTATTCTTATTCTTGACTTTCTCTTAATATCAAGATATTATGAACGAT GTCCTCTTTCTTTAGTTCTATTTATTGGAAAAGTTGTGAATCTGTTTTTCCGAAAATGCATTTTGAGGATGAGGTTCCAA ACCCTTTAATAGTTCTCATGTTCCAGCCAACCAATTATGAACACATTAGCACAGGATTGTACATAAAATTTGATGGTTTA GCAAGATAAGGAAGAATGGAAGATATATAACATTTTAATTTTCTTAATGGCTATGTGATTGTTTTGTACTTCTGTTATTA TATCATCAGATGCTTTTGATACTGAGCAATTGCTACTTGTTATGGACAAGTTGAAGCGTGGCGAAGCTGTAGACATCCCG AAGTATGATTTTAAAAGTTGCAAGACTGATGTGTTAAGAAGGGTATATCTCTAGACTTCCTTGTTTAATTATCTCTATAC CCTTTGTTTCTTAAAATGCTTAACAGCTTAAGATTGAAATTCTAATTTTGAAGTTGTGAATATCATGCAAAAGAATAAAT TTGTTATTTTTTTCTGCATATAGAAAGTATAAAATATATGTGCATGATTATCCAAATGCATATCTCAAACACAGTGTTGC ATGCGAAATTGTTGTCATTATCATTACATTTTATATTCCTTTAACCTGTTTTCAGGTAAACCCTTCAGATGTTATAATTT TGGAAGGGATCCTTGTTTTCCATGATCCACGTGTTCGGGAGTTGATGAGTATGAAGATATTTGTTGACACAGGTCCTTTA TTGTTGTTGCTCTACCTTTGGCTCGGAATTAATTTTATTATATGTTCGAGATTTTTGTTAGATTCATTTTCTTTCATCTC TTTGAACTAGTTCACCCTCCCCCTTCTTTTCATAAGCCACATTGTGATATAAGAAAATCACATGCTGAATTGTTCCTTGT TATTTAAAAAAAAAATGATTTTTTTGTTTGCATGGGTTGGGGTGGATATGCTATTGAGTCTATGACACTTTGACCCTATA TCTTCAAATTTGTTACTTTTTTTTCATTTATTTGTCAGTTCTATATTATTATTAAATTGTTTCTTATGCGTACCTTCTAT AATAAATTTATAAGCCTGTTCATTTTCTGTGTTGTTGTTGGCACACTAAGTTAAGCTGTCACTTACCATTTCTAAAAAAT CAGTGCAGATGCTGATGTTCGTTTGGCAAGAAGAATTAGGCGTGATACTAATGAGAAGGGTCGGGATATTGGAACTGTTC TTGATCAGGTAGCAATTTTTTGCCACACCATTTGTGCCACCATTAGCATGCTTTGATTATCTCTTGCTTCTTTTTCAGAT TGATCATATTTACTTCATTGCATGACTTGAGAAATGTTATTGTAGTTTCACGCTGTTGATCCGCTACTATTTAAATTCCT TAAAGATGAAACCTATGATTATTCAGTATTTTTGTGGAATTAAATCATTAAGGATTGATTTGTATAATATCGGTGAAACA CACATATTTTTATCAGATTTCAGTAGTTAATTTATTTGATCTTGATAGATATGGCAGCTGATTCTTATGTTATACTTGTT TCAGTATTCAAAATTCGTGAAGCCAGCTTTTGATGACTTTATTCTTCCAACAAAGAAGTACGCTGATATAATTATACCCC GTGGAGGAGATAATCATGTGGCCTGTGATTTGATTGTACAGCATATCCGCACAAAGCTCGGTCAGCATGACCTTTGTAAA ATATATCCAAATTTGTATGTAATTCAGACAACTTTTCAGGTACCCATTTCACTTGCAACTTTTTTAACTTTCCAGTTATC CCACCAATAGCTTCAAACTTGGAATCATCATTATAATGCTTCTATGTAGATACGGGGAATGCATACTCTGATCCGTGATG CTCAAATAACAAAGCATGATTTTGTATTTTATGCTGATCGTTTGATTAGATTGGTAAGTAAACGCAGCTCATTTGAACAC GGAAACTTTCTTACATTATTAATAATCATAATTCGCACGATTGACTAGGTTGTAGAACACGGCTTGGGGCATCTTCCCTT TACAGAAAAGCAAGTTATCACTCCCACGGGTAACCTTTTCTTTTCCAGTACTTGCCTTGTAAGATTATTTTGATATGCAA GTTTTGTGTGCTGTTTCCTATGCTGATCCTAGCAGCTAAAGGTTTTAACTGAATGAGCTAAATACCTTAGTTTGTATCAT ATTGCCTTGACAGATGATTTGTCCAAAATTTTCACTGTATATATCTTGGATAATGTGTATATTGGGTACCTAGTTTCTTG CATTCTGTCATCTTGTTCCCAAATTTGAGAAATACAAGAGTTACACGTTCTTAGTCATGCACTTTTTTAACTTCCATGTC AAGGAGCTTTTCTTGATAGATTGGGTACCAAATGTTTATTATGTTATAGAACTTGAGAGAGAAAATATTTGCTTTCCATG TTGTTAATTACAGCAATTACCATGCTGAACTAAGCTTTTACATCTGTCTCCATGTAGTTTTCATTCTTATTCTTCAACTT ATATAATAGAGTTACTTTGTTTCATGTATAACCATCTTATGGTAACTGTTGATGCATGTCCTCAAAATGCAGGTTCTGTA TACACTGGTGTGGATTTTTGTAAGAGATTGTGTGGTGTCTCTGTCATCAGGAGGTATTAGCCAGTCCAAAGCTGGAGTTA CAACTCACATGGCCATTTGAATATTAGATTAAACATTTTTATCCATGCTTCAAAGTATTGAATAACATGTCTTCTCTTAA TAGATAATTAGATATGATATAATTCAATAAATAAAGGAAAGATCCATTGTTGATTTGGATTTAGAAGTACCAAATTCATT AGATTGCATATGGTGGCATTTTTTTTTTGCCTCGGAATTGTAATAAACCTATCCTTGTTAACTAGATCCTTCCTCCTCCC TCCTTGGTTTGATGTGAAGTTACATCTCTGCAGTTTATAATTTATTGTTTAGCAAAACACTTTCCTTTATCCTATATGAT ATTCTACAAATTTCAGTGGGGAGAGTATGGAGAATGCTTTAAGAGCTTGCTGTAAAGGTATCAAGATTGGGAAAATTTTA ATTCACAGAGAAGGTGACAATGGTCAGCAGGTTTGTCCATCTGCACGTATGCTTTGATGCGTATCATGTTTCATTTTTTC ATCACTGACTTCTTATCCTTTAATCAAATGAACAGCTAATATATGAAAAGTTACCAATGGATATCTCAGACCGGCATGTG TTGCTGTTGGACCCTATCCTCGGCACAGGTTTGTTATTCTCTTGTTTGTCGTCACCCTTGTTCTGAAGTTTCAAGTGTCT GCAGACTATTGCAACTTTATTATAGCTACAAATTAATTAGTATAATGAGAGTGGATTGAAAATTGTTTTTTTGTTTGCTG ATTTTCATGTTTAGGTAATTCGGCTGTTCAAGCAATTTCTTTGCTTATAAGAAAGGGTGTACCAGAGTCCAACATTATAT TTCTTAATCTCATATCTGTAAGTTGACAGTGCCTTAATCTCTCTATATGTCTTGCTCTTTTATTGAATTATGAATGTTTT TCCCTTGCTTCTTTTTTTGATGAGTTGCATTTATCTTCTCATGTTCAGGCTCCTTTAGGTGTGCATGTGGTATGCAAAAA ATTTCCAAAAATTAAAATAGTGACATCTGAGATTGAGATAGGTTTGAATAAAGATTTCCGTGTCATACCGGGCATGGGCG AGTTTGGCGATAGGTACTTTGGAACAGATGATGATGAACAACTGGTGGTTCCTTCCCAGTAGTTACACCTTGGGGGCGAA TTCCACAATATTTTAGGTTGATTGTTATTATTATTAATGAGAGATTCCTATGGAAGTATGATAGAATTTGCTCAATCACT ATTATGCTGGACATCTGTCTTTTAGTTCAAAATCAATTTTTACTCTATGGAGCCTTGGATCACCATTTCATTATCCTTTT GTTGTGTATTTTATAAAATGGCATGTGGATGCTCCAATGATTATTTCATCTTACCTTTTACTTCCACAATTGTTCTATGG TGGGAAGTTCCATAATCATTTCTTGAGAGAAGTTTCGGAGTATCACTTATGGGGTTACCATGTTTAAGATTATGTACTCA CCTCCAATCTAAACACTAGAAGAGGATGGTGGGTTAGAGCTTTCGACAAAATGGTTGATTAGTATTAATGAGGTGGCTGA AATATTATTAATAAGCAATAAGCTACTACTCGCTACTGAGAGGGATTTTTCTATGCAAGGGTGATATTAAGCCTTCATTA GAGTTACCCCCTTGACACCTATTGTCTGTAACTTGAAACAAAGTCTCTGATGTATATTTCTTAAAATTCATGCTAAGCTT AACCCTACTTTAAAAAGCTTGGTTTAGGGTTGATTTACCCTTTTATTAAAACTTCGGTCA
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0139200.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAATGCTAAGTCAGCTTTAGATTTAATGGAGTCTTCATCAGAAGTTCATTTTTCGGGATTTCACATGGATGGTTTTGA GAAAAGAGAGGCCAACACTGAACAACCAACAACATCGGCAACTGACATGTATAAACAACCTTTCATAATAGGTGTTGCTG GGGGTGCTGCATCTGGCAAGAAAACAGTTTGTGACATGATTATTCAGCAACTTCATGACCAGCGAGTTGTCCTTGTTAAT CAGGATTCCTTTTACAATAACTTGACTGAGGAGGAAGTTACAAGAGTGCAGGATTACAATTTTGACCATCCTGATGCTTT TGATACTGAGCAATTGCTACTTGTTATGGACAAGTTGAAGCGTGGCGAAGCTGTAGACATCCCGAAGTATGATTTTAAAA GTTGCAAGACTGATGTGTTAAGAAGGGTAAACCCTTCAGATGTTATAATTTTGGAAGGGATCCTTGTTTTCCATGATCCA CGTGTTCGGGAGTTGATGAGTATGAAGATATTTGTTGACACAGATGCTGATGTTCGTTTGGCAAGAAGAATTAGGCGTGA TACTAATGAGAAGGGTCGGGATATTGGAACTGTTCTTGATCAGTATTCAAAATTCGTGAAGCCAGCTTTTGATGACTTTA TTCTTCCAACAAAGAAGTACGCTGATATAATTATACCCCGTGGAGGAGATAATCATGTGGCCTGTGATTTGATTGTACAG CATATCCGCACAAAGCTCGGTCAGCATGACCTTTGTAAAATATATCCAAATTTGTATGTAATTCAGACAACTTTTCAGAT ACGGGGAATGCATACTCTGATCCGTGATGCTCAAATAACAAAGCATGATTTTGTATTTTATGCTGATCGTTTGATTAGAT TGGTTGTAGAACACGGCTTGGGGCATCTTCCCTTTACAGAAAAGCAAGTTATCACTCCCACGGGTTCTGTATACACTGGT GTGGATTTTTGTAAGAGATTGTGTGGTGTCTCTGTCATCAGGAGTGGGGAGAGTATGGAGAATGCTTTAAGAGCTTGCTG TAAAGGTATCAAGATTGGGAAAATTTTAATTCACAGAGAAGGTGACAATGGTCAGCAGCTAATATATGAAAAGTTACCAA TGGATATCTCAGACCGGCATGTGTTGCTGTTGGACCCTATCCTCGGCACAGGTAATTCGGCTGTTCAAGCAATTTCTTTG CTTATAAGAAAGGGTGTACCAGAGTCCAACATTATATTTCTTAATCTCATATCTGCTCCTTTAGGTGTGCATGTGGTATG CAAAAAATTTCCAAAAATTAAAATAGTGACATCTGAGATTGAGATAGGTTTGAATAAAGATTTCCGTGTCATACCGGGCA TGGGCGAGTTTGGCGATAGGTACTTTGGAACAGATGATGATGAACAACTGGTGGTTCCTTCCCAGTAG
Download CDS Sequence

Protein sequence (LotjaGi6g1v0139200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MNAKSALDLMESSSEVHFSGFHMDGFEKREANTEQPTTSATDMYKQPFIIGVAGGAASGKKTVCDMIIQQLHDQRVVLVN QDSFYNNLTEEEVTRVQDYNFDHPDAFDTEQLLLVMDKLKRGEAVDIPKYDFKSCKTDVLRRVNPSDVIILEGILVFHDP RVRELMSMKIFVDTDADVRLARRIRRDTNEKGRDIGTVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVACDLIVQ HIRTKLGQHDLCKIYPNLYVIQTTFQIRGMHTLIRDAQITKHDFVFYADRLIRLVVEHGLGHLPFTEKQVITPTGSVYTG VDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPMDISDRHVLLLDPILGTGNSAVQAISL LIRKGVPESNIIFLNLISAPLGVHVVCKKFPKIKIVTSEIEIGLNKDFRVIPGMGEFGDRYFGTDDDEQLVVPSQ
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10285
16 468 453 2.6E-274 –
PANTHER
PTHR10285:SF149
16 468 453 2.6E-274 –
SUPERFAMILY
SSF52540
36 238 203 1.86E-43
IPR027417
Gene3D
G3DSA:3.40.50.300
43 248 206 7.2E-64 –
TIGRFAM
TIGR00235
45 245 201 1.1E-70
IPR000764
PRINTS
PR00988
47 64 18 3.4E-28 –
Pfam
PF00485
49 233 185 2.0E-44
IPR006083
CDD
cd02023
49 245 197 4.55346E-104
IPR000764
PRINTS
PR00988
77 88 12 3.4E-28 –
PRINTS
PR00988
122 137 16 3.4E-28 –
PRINTS
PR00988
177 187 11 3.4E-28 –
PRINTS
PR00988
191 202 12 3.4E-28 –
PRINTS
PR00988
213 226 14 3.4E-28 –
SUPERFAMILY
SSF53271
248 465 218 2.62E-58
IPR029057
Gene3D
G3DSA:3.40.50.2020
249 464 216 1.2E-81
IPR029057
Pfam
PF14681
263 464 202 1.7E-70 –
CDD
cd06223
322 437 116 7.82231E-11
IPR000836

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0009116
Biological process Nucleoside metabolic process The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).
Subterm of
GO:0016301
Molecular function Kinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0139200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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