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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0139200 |
| Transcript ID | LotjaGi6g1v0139200.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Uridine kinase; TAIR: AT4G26510.1 uridine kinase-like 4; Swiss-Prot: sp|O65583|UKL4_ARATH Uridine kinase-like protein 4; TrEMBL-Plants: tr|V7BNR6|V7BNR6_PHAVU Uridine kinase; Found in the gene: LotjaGi6g1v0139200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:40439191..40444036) extracted from Lotus japonicus Gifu genome v1.2.
CTGAGGTCTGAATTCATGTTTGCAGTGAAAAGAAATACTTGAGCTTTTAACAATTTACATGAAATTAAATTACTTAGCAG TTTATAGAGGTGTTCATATGCTAACATCATAATTTCATTTCACCTTATATCCCATTACACTGTCATTTTATGCTACAAAT TCTGTCAACTTATATATCATCTTATGTTTATAAAGTAGAGCTTCCTGCACAATAAGTTAGGATGCCTTGTTTTCAATCTC ATAACTTGTTTCATCTTAATGATTCTAATTTTATTTTCTAATTTTTGTTTTATGCTACAGGTGTTGCTGGGGGTGCTGCA TCTGGCAAGAAAACAGTTTGTGACATGATTATTCAGCAACTTCATGACCAGCGAGTTGTCCTTGTTAATCAGGCAATGCA TTCTTCCTATTTATACTTGCTGGTGGTCTAATTGAGAATGTATTATGATTTACTGTTTGTGACTCAAAATGATCATCGAG GCAAACAATCAGTCGGTTAGTTCTTCAAGCCTCTAGCATCCTGTTCTCTAAGGAAAACAATCAGTCTTTTACTATCTTTA TTTTCAATTTTATGGTAAAATAGACACCTTGACACCATAATGCATCACCCTCTTTTTTTATGATTAGTTTTGATATTGTG TCTTGCTTCTGCCAAACCTCCTCTTGTATTAATAATATTTACCTCTTTTTCTCAAATTTCCCTTCAAAATGTCATAATAT GAAGTTTGTATACCTTTATTTTGGGTAACATAGTTGAAAAATATTCTGAATGTCTTTTCTTTATCATTCATTATATTTTC TTTTCTCCCCCCCCCCCCTGGTTTATCACTTCTATTAATTGTTTCTTTCTTCAGTTTGTGTTATTTATCTTTTCTGGATC ATATTTCAAAGTATGGACTAAATGTTTCTTATTGCACGTCCTGATACATTTGGGCTTAATAGATAAACTAATTTATTTAT GACAGGATTCCTTTTACAATAACTTGACTGAGGAGGAAGTTACAAGAGTGCAGGATTACAATTTTGACCATCCTGGTCAG TACAATTATACTTATTCTATTCTTATTCTTGACTTTCTCTTAATATCAAGATATTATGAACGATGTCCTCTTTCTTTAGT TCTATTTATTGGAAAAGTTGTGAATCTGTTTTTCCGAAAATGCATTTTGAGGATGAGGTTCCAAACCCTTTAATAGTTCT CATGTTCCAGCCAACCAATTATGAACACATTAGCACAGGATTGTACATAAAATTTGATGGTTTAGCAAGATAAGGAAGAA TGGAAGATATATAACATTTTAATTTTCTTAATGGCTATGTGATTGTTTTGTACTTCTGTTATTATATCATCAGATGCTTT TGATACTGAGCAATTGCTACTTGTTATGGACAAGTTGAAGCGTGGCGAAGCTGTAGACATCCCGAAGTATGATTTTAAAA GTTGCAAGACTGATGTGTTAAGAAGGGTATATCTCTAGACTTCCTTGTTTAATTATCTCTATACCCTTTGTTTCTTAAAA TGCTTAACAGCTTAAGATTGAAATTCTAATTTTGAAGTTGTGAATATCATGCAAAAGAATAAATTTGTTATTTTTTTCTG CATATAGAAAGTATAAAATATATGTGCATGATTATCCAAATGCATATCTCAAACACAGTGTTGCATGCGAAATTGTTGTC ATTATCATTACATTTTATATTCCTTTAACCTGTTTTCAGGTAAACCCTTCAGATGTTATAATTTTGGAAGGGATCCTTGT TTTCCATGATCCACGTGTTCGGGAGTTGATGAGTATGAAGATATTTGTTGACACAGGTCCTTTATTGTTGTTGCTCTACC TTTGGCTCGGAATTAATTTTATTATATGTTCGAGATTTTTGTTAGATTCATTTTCTTTCATCTCTTTGAACTAGTTCACC CTCCCCCTTCTTTTCATAAGCCACATTGTGATATAAGAAAATCACATGCTGAATTGTTCCTTGTTATTTAAAAAAAAAAT GATTTTTTTGTTTGCATGGGTTGGGGTGGATATGCTATTGAGTCTATGACACTTTGACCCTATATCTTCAAATTTGTTAC TTTTTTTTCATTTATTTGTCAGTTCTATATTATTATTAAATTGTTTCTTATGCGTACCTTCTATAATAAATTTATAAGCC TGTTCATTTTCTGTGTTGTTGTTGGCACACTAAGTTAAGCTGTCACTTACCATTTCTAAAAAATCAGTGCAGATGCTGAT GTTCGTTTGGCAAGAAGAATTAGGCGTGATACTAATGAGAAGGGTCGGGATATTGGAACTGTTCTTGATCAGGTAGCAAT TTTTTGCCACACCATTTGTGCCACCATTAGCATGCTTTGATTATCTCTTGCTTCTTTTTCAGATTGATCATATTTACTTC ATTGCATGACTTGAGAAATGTTATTGTAGTTTCACGCTGTTGATCCGCTACTATTTAAATTCCTTAAAGATGAAACCTAT GATTATTCAGTATTTTTGTGGAATTAAATCATTAAGGATTGATTTGTATAATATCGGTGAAACACACATATTTTTATCAG ATTTCAGTAGTTAATTTATTTGATCTTGATAGATATGGCAGCTGATTCTTATGTTATACTTGTTTCAGTATTCAAAATTC GTGAAGCCAGCTTTTGATGACTTTATTCTTCCAACAAAGAAGTACGCTGATATAATTATACCCCGTGGAGGAGATAATCA TGTGGCCTGTGATTTGATTGTACAGCATATCCGCACAAAGCTCGGTCAGCATGACCTTTGTAAAATATATCCAAATTTGT ATGTAATTCAGACAACTTTTCAGGTACCCATTTCACTTGCAACTTTTTTAACTTTCCAGTTATCCCACCAATAGCTTCAA ACTTGGAATCATCATTATAATGCTTCTATGTAGATACGGGGAATGCATACTCTGATCCGTGATGCTCAAATAACAAAGCA TGATTTTGTATTTTATGCTGATCGTTTGATTAGATTGGTAAGTAAACGCAGCTCATTTGAACACGGAAACTTTCTTACAT TATTAATAATCATAATTCGCACGATTGACTAGGTTGTAGAACACGGCTTGGGGCATCTTCCCTTTACAGAAAAGCAAGTT ATCACTCCCACGGGTAACCTTTTCTTTTCCAGTACTTGCCTTGTAAGATTATTTTGATATGCAAGTTTTGTGTGCTGTTT CCTATGCTGATCCTAGCAGCTAAAGGTTTTAACTGAATGAGCTAAATACCTTAGTTTGTATCATATTGCCTTGACAGATG ATTTGTCCAAAATTTTCACTGTATATATCTTGGATAATGTGTATATTGGGTACCTAGTTTCTTGCATTCTGTCATCTTGT TCCCAAATTTGAGAAATACAAGAGTTACACGTTCTTAGTCATGCACTTTTTTAACTTCCATGTCAAGGAGCTTTTCTTGA TAGATTGGGTACCAAATGTTTATTATGTTATAGAACTTGAGAGAGAAAATATTTGCTTTCCATGTTGTTAATTACAGCAA TTACCATGCTGAACTAAGCTTTTACATCTGTCTCCATGTAGTTTTCATTCTTATTCTTCAACTTATATAATAGAGTTACT TTGTTTCATGTATAACCATCTTATGGTAACTGTTGATGCATGTCCTCAAAATGCAGGTTCTGTATACACTGGTGTGGATT TTTGTAAGAGATTGTGTGGTGTCTCTGTCATCAGGAGGTATTAGCCAGTCCAAAGCTGGAGTTACAACTCACATGGCCAT TTGAATATTAGATTAAACATTTTTATCCATGCTTCAAAGTATTGAATAACATGTCTTCTCTTAATAGATAATTAGATATG ATATAATTCAATAAATAAAGGAAAGATCCATTGTTGATTTGGATTTAGAAGTACCAAATTCATTAGATTGCATATGGTGG CATTTTTTTTTTGCCTCGGAATTGTAATAAACCTATCCTTGTTAACTAGATCCTTCCTCCTCCCTCCTTGGTTTGATGTG AAGTTACATCTCTGCAGTTTATAATTTATTGTTTAGCAAAACACTTTCCTTTATCCTATATGATATTCTACAAATTTCAG TGGGGAGAGTATGGAGAATGCTTTAAGAGCTTGCTGTAAAGGTATCAAGATTGGGAAAATTTTAATTCACAGAGAAGGTG ACAATGGTCAGCAGGTTTGTCCATCTGCACGTATGCTTTGATGCGTATCATGTTTCATTTTTTCATCACTGACTTCTTAT CCTTTAATCAAATGAACAGCTAATATATGAAAAGTTACCAATGGATATCTCAGACCGGCATGTGTTGCTGTTGGACCCTA TCCTCGGCACAGGTTTGTTATTCTCTTGTTTGTCGTCACCCTTGTTCTGAAGTTTCAAGTGTCTGCAGACTATTGCAACT TTATTATAGCTACAAATTAATTAGTATAATGAGAGTGGATTGAAAATTGTTTTTTTGTTTGCTGATTTTCATGTTTAGGT AATTCGGCTGTTCAAGCAATTTCTTTGCTTATAAGAAAGGGTGTACCAGAGTCCAACATTATATTTCTTAATCTCATATC TGTAAGTTGACAGTGCCTTAATCTCTCTATATGTCTTGCTCTTTTATTGAATTATGAATGTTTTTCCCTTGCTTCTTTTT TTGATGAGTTGCATTTATCTTCTCATGTTCAGGCTCCTTTAGGTGTGCATGTGGTATGCAAAAAATTTCCAAAAATTAAA ATAGTGACATCTGAGATTGAGATAGGTTTGAATAAAGATTTCCGTGTCATACCGGGCATGGGCGAGTTTGGCGATAGGTA CTTTGGAACAGATGATGATGAACAACTGGTGGTTCCTTCCCAGTAG
CDS sequence (LotjaGi6g1v0139200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTATTCAGCAACTTCATGACCAGCGAGTTGTCCTTGTTAATCAGGATTCCTTTTACAATAACTTGACTGAGGAGGA AGTTACAAGAGTGCAGGATTACAATTTTGACCATCCTGATGCTTTTGATACTGAGCAATTGCTACTTGTTATGGACAAGT TGAAGCGTGGCGAAGCTGTAGACATCCCGAAGTATGATTTTAAAAGTTGCAAGACTGATGTGTTAAGAAGGGTAAACCCT TCAGATGTTATAATTTTGGAAGGGATCCTTGTTTTCCATGATCCACGTGTTCGGGAGTTGATGAGTATGAAGATATTTGT TGACACAGATGCTGATGTTCGTTTGGCAAGAAGAATTAGGCGTGATACTAATGAGAAGGGTCGGGATATTGGAACTGTTC TTGATCAGTATTCAAAATTCGTGAAGCCAGCTTTTGATGACTTTATTCTTCCAACAAAGAAGTACGCTGATATAATTATA CCCCGTGGAGGAGATAATCATGTGGCCTGTGATTTGATTGTACAGCATATCCGCACAAAGCTCGGTCAGCATGACCTTTG TAAAATATATCCAAATTTGTATGTAATTCAGACAACTTTTCAGATACGGGGAATGCATACTCTGATCCGTGATGCTCAAA TAACAAAGCATGATTTTGTATTTTATGCTGATCGTTTGATTAGATTGGTTGTAGAACACGGCTTGGGGCATCTTCCCTTT ACAGAAAAGCAAGTTATCACTCCCACGGGTTCTGTATACACTGGTGTGGATTTTTGTAAGAGATTGTGTGGTGTCTCTGT CATCAGGAGTGGGGAGAGTATGGAGAATGCTTTAAGAGCTTGCTGTAAAGGTATCAAGATTGGGAAAATTTTAATTCACA GAGAAGGTGACAATGGTCAGCAGCTAATATATGAAAAGTTACCAATGGATATCTCAGACCGGCATGTGTTGCTGTTGGAC CCTATCCTCGGCACAGGTAATTCGGCTGTTCAAGCAATTTCTTTGCTTATAAGAAAGGGTGTACCAGAGTCCAACATTAT ATTTCTTAATCTCATATCTGCTCCTTTAGGTGTGCATGTGGTATGCAAAAAATTTCCAAAAATTAAAATAGTGACATCTG AGATTGAGATAGGTTTGAATAAAGATTTCCGTGTCATACCGGGCATGGGCGAGTTTGGCGATAGGTACTTTGGAACAGAT GATGATGAACAACTGGTGGTTCCTTCCCAGTAG
Protein sequence (LotjaGi6g1v0139200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIIQQLHDQRVVLVNQDSFYNNLTEEEVTRVQDYNFDHPDAFDTEQLLLVMDKLKRGEAVDIPKYDFKSCKTDVLRRVNP SDVIILEGILVFHDPRVRELMSMKIFVDTDADVRLARRIRRDTNEKGRDIGTVLDQYSKFVKPAFDDFILPTKKYADIII PRGGDNHVACDLIVQHIRTKLGQHDLCKIYPNLYVIQTTFQIRGMHTLIRDAQITKHDFVFYADRLIRLVVEHGLGHLPF TEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPMDISDRHVLLLD PILGTGNSAVQAISLLIRKGVPESNIIFLNLISAPLGVHVVCKKFPKIKIVTSEIEIGLNKDFRVIPGMGEFGDRYFGTD DDEQLVVPSQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 403 | 403 | 1.2E-253 | – | |
| CDD | 1 | 180 | 180 | 9.20981E-91 | ||
| Gene3D | 1 | 183 | 183 | 9.6E-53 | – | |
| PANTHER | 1 | 403 | 403 | 1.2E-253 | – | |
| SUPERFAMILY | 6 | 173 | 168 | 1.45E-32 | ||
| Pfam | 11 | 168 | 158 | 2.6E-39 | ||
| PRINTS | 12 | 23 | 12 | 6.8E-19 | – | |
| PRINTS | 57 | 72 | 16 | 6.8E-19 | – | |
| PRINTS | 112 | 122 | 11 | 6.8E-19 | – | |
| PRINTS | 126 | 137 | 12 | 6.8E-19 | – | |
| PRINTS | 148 | 161 | 14 | 6.8E-19 | – | |
| SUPERFAMILY | 183 | 400 | 218 | 1.79E-58 | ||
| Gene3D | 184 | 399 | 216 | 8.0E-82 | ||
| Pfam | 198 | 399 | 202 | 1.2E-70 | – | |
| CDD | 257 | 372 | 116 | 2.05126E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Nucleoside metabolic process | The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine). | ||
| Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. |
Expression pattern of LotjaGi6g1v0139200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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