Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0139200 |
| Transcript ID | LotjaGi6g1v0139200.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Uridine kinase; TAIR: AT4G26510.1 uridine kinase-like 4; Swiss-Prot: sp|O65583|UKL4_ARATH Uridine kinase-like protein 4; TrEMBL-Plants: tr|I1KYV2|I1KYV2_SOYBN Uridine kinase; Found in the gene: LotjaGi6g1v0139200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:40439191..40444538) extracted from Lotus japonicus Gifu genome v1.2.
CCAATGAATGCTAAGTCAGCTTTAGATTTAATGGAGTCTTCATCAGAAGTTCATTTTTCGGGATTTCACATGGATGGTTT TGAGAAAAGAGAGGCCAACACTGAACAACCAACAACATCGGCAACTGACATGTATAAACAACCTTTCATAATAGGTGTGT TTTCTTATGGCTAGCAGCTAAAGTATTAGTAGTAGTAGTAAAGTCACCACCAACTACCTATTTGGGTCCTTAGAGGTGCT AGAGACTATAAATCATAAATGGATTGGGTTCTGTTCTGCCAAAGAAAATGTTACCAGCTCTGTTCTTTTTCACTTTGGAT GTATTTCACATGAGCCATTAAGTTGTGTTGACTGTTGAGTGTACTTGAATAAAATTCCTGTTGAAGAGCACCACAGAAAA ATAACCTAACCGAGGTCTGAATTTATGTTCAACACAAGTTTAGTTGAAATAATAGAATTTATTTGCTGGAAATATATGTT TCTTTGAAAGAAAAATAACCTACTGAGGTCTGAATTCATGTTTGCAGTGAAAAGAAATACTTGAGCTTTTAACAATTTAC ATGAAATTAAATTACTTAGCAGTTTATAGAGGTGTTCATATGCTAACATCATAATTTCATTTCACCTTATATCCCATTAC ACTGTCATTTTATGCTACAAATTCTGTCAACTTATATATCATCTTATGTTTATAAAGTAGAGCTTCCTGCACAATAAGTT AGGATGCCTTGTTTTCAATCTCATAACTTGTTTCATCTTAATGATTCTAATTTTATTTTCTAATTTTTGTTTTATGCTAC AGGTGTTGCTGGGGGTGCTGCATCTGGCAAGAAAACAGTTTGTGACATGATTATTCAGCAACTTCATGACCAGCGAGTTG TCCTTGTTAATCAGGCAATGCATTCTTCCTATTTATACTTGCTGGTGGTCTAATTGAGAATGTATTATGATTTACTGTTT GTGACTCAAAATGATCATCGAGGCAAACAATCAGTCGGTTAGTTCTTCAAGCCTCTAGCATCCTGTTCTCTAAGGAAAAC AATCAGTCTTTTACTATCTTTATTTTCAATTTTATGGTAAAATAGACACCTTGACACCATAATGCATCACCCTCTTTTTT TATGATTAGTTTTGATATTGTGTCTTGCTTCTGCCAAACCTCCTCTTGTATTAATAATATTTACCTCTTTTTCTCAAATT TCCCTTCAAAATGTCATAATATGAAGTTTGTATACCTTTATTTTGGGTAACATAGTTGAAAAATATTCTGAATGTCTTTT CTTTATCATTCATTATATTTTCTTTTCTCCCCCCCCCCCCTGGTTTATCACTTCTATTAATTGTTTCTTTCTTCAGTTTG TGTTATTTATCTTTTCTGGATCATATTTCAAAGTATGGACTAAATGTTTCTTATTGCACGTCCTGATACATTTGGGCTTA ATAGATAAACTAATTTATTTATGACAGGATTCCTTTTACAATAACTTGACTGAGGAGGAAGTTACAAGAGTGCAGGATTA CAATTTTGACCATCCTGGTCAGTACAATTATACTTATTCTATTCTTATTCTTGACTTTCTCTTAATATCAAGATATTATG AACGATGTCCTCTTTCTTTAGTTCTATTTATTGGAAAAGTTGTGAATCTGTTTTTCCGAAAATGCATTTTGAGGATGAGG TTCCAAACCCTTTAATAGTTCTCATGTTCCAGCCAACCAATTATGAACACATTAGCACAGGATTGTACATAAAATTTGAT GGTTTAGCAAGATAAGGAAGAATGGAAGATATATAACATTTTAATTTTCTTAATGGCTATGTGATTGTTTTGTACTTCTG TTATTATATCATCAGATGCTTTTGATACTGAGCAATTGCTACTTGTTATGGACAAGTTGAAGCGTGGCGAAGCTGTAGAC ATCCCGAAGTATGATTTTAAAAGTTGCAAGACTGATGTGTTAAGAAGGGTATATCTCTAGACTTCCTTGTTTAATTATCT CTATACCCTTTGTTTCTTAAAATGCTTAACAGCTTAAGATTGAAATTCTAATTTTGAAGTTGTGAATATCATGCAAAAGA ATAAATTTGTTATTTTTTTCTGCATATAGAAAGTATAAAATATATGTGCATGATTATCCAAATGCATATCTCAAACACAG TGTTGCATGCGAAATTGTTGTCATTATCATTACATTTTATATTCCTTTAACCTGTTTTCAGGTAAACCCTTCAGATGTTA TAATTTTGGAAGGGATCCTTGTTTTCCATGATCCACGTGTTCGGGAGTTGATGAGTATGAAGATATTTGTTGACACAGGT CCTTTATTGTTGTTGCTCTACCTTTGGCTCGGAATTAATTTTATTATATGTTCGAGATTTTTGTTAGATTCATTTTCTTT CATCTCTTTGAACTAGTTCACCCTCCCCCTTCTTTTCATAAGCCACATTGTGATATAAGAAAATCACATGCTGAATTGTT CCTTGTTATTTAAAAAAAAAATGATTTTTTTGTTTGCATGGGTTGGGGTGGATATGCTATTGAGTCTATGACACTTTGAC CCTATATCTTCAAATTTGTTACTTTTTTTTCATTTATTTGTCAGTTCTATATTATTATTAAATTGTTTCTTATGCGTACC TTCTATAATAAATTTATAAGCCTGTTCATTTTCTGTGTTGTTGTTGGCACACTAAGTTAAGCTGTCACTTACCATTTCTA AAAAATCAGTGCAGATGCTGATGTTCGTTTGGCAAGAAGAATTAGGCGTGATACTAATGAGAAGGGTCGGGATATTGGAA CTGTTCTTGATCAGGTAGCAATTTTTTGCCACACCATTTGTGCCACCATTAGCATGCTTTGATTATCTCTTGCTTCTTTT TCAGATTGATCATATTTACTTCATTGCATGACTTGAGAAATGTTATTGTAGTTTCACGCTGTTGATCCGCTACTATTTAA ATTCCTTAAAGATGAAACCTATGATTATTCAGTATTTTTGTGGAATTAAATCATTAAGGATTGATTTGTATAATATCGGT GAAACACACATATTTTTATCAGATTTCAGTAGTTAATTTATTTGATCTTGATAGATATGGCAGCTGATTCTTATGTTATA CTTGTTTCAGTATTCAAAATTCGTGAAGCCAGCTTTTGATGACTTTATTCTTCCAACAAAGAAGTACGCTGATATAATTA TACCCCGTGGAGGAGATAATCATGTGGCCTGTGATTTGATTGTACAGCATATCCGCACAAAGCTCGGTCAGCATGACCTT TGTAAAATATATCCAAATTTGTATGTAATTCAGACAACTTTTCAGGTACCCATTTCACTTGCAACTTTTTTAACTTTCCA GTTATCCCACCAATAGCTTCAAACTTGGAATCATCATTATAATGCTTCTATGTAGATACGGGGAATGCATACTCTGATCC GTGATGCTCAAATAACAAAGCATGATTTTGTATTTTATGCTGATCGTTTGATTAGATTGGTAAGTAAACGCAGCTCATTT GAACACGGAAACTTTCTTACATTATTAATAATCATAATTCGCACGATTGACTAGGTTGTAGAACACGGCTTGGGGCATCT TCCCTTTACAGAAAAGCAAGTTATCACTCCCACGGGTAACCTTTTCTTTTCCAGTACTTGCCTTGTAAGATTATTTTGAT ATGCAAGTTTTGTGTGCTGTTTCCTATGCTGATCCTAGCAGCTAAAGGTTTTAACTGAATGAGCTAAATACCTTAGTTTG TATCATATTGCCTTGACAGATGATTTGTCCAAAATTTTCACTGTATATATCTTGGATAATGTGTATATTGGGTACCTAGT TTCTTGCATTCTGTCATCTTGTTCCCAAATTTGAGAAATACAAGAGTTACACGTTCTTAGTCATGCACTTTTTTAACTTC CATGTCAAGGAGCTTTTCTTGATAGATTGGGTACCAAATGTTTATTATGTTATAGAACTTGAGAGAGAAAATATTTGCTT TCCATGTTGTTAATTACAGCAATTACCATGCTGAACTAAGCTTTTACATCTGTCTCCATGTAGTTTTCATTCTTATTCTT CAACTTATATAATAGAGTTACTTTGTTTCATGTATAACCATCTTATGGTAACTGTTGATGCATGTCCTCAAAATGCAGGT TCTGTATACACTGGTGTGGATTTTTGTAAGAGATTGTGTGGTGTCTCTGTCATCAGGAGGTATTAGCCAGTCCAAAGCTG GAGTTACAACTCACATGGCCATTTGAATATTAGATTAAACATTTTTATCCATGCTTCAAAGTATTGAATAACATGTCTTC TCTTAATAGATAATTAGATATGATATAATTCAATAAATAAAGGAAAGATCCATTGTTGATTTGGATTTAGAAGTACCAAA TTCATTAGATTGCATATGGTGGCATTTTTTTTTTGCCTCGGAATTGTAATAAACCTATCCTTGTTAACTAGATCCTTCCT CCTCCCTCCTTGGTTTGATGTGAAGTTACATCTCTGCAGTTTATAATTTATTGTTTAGCAAAACACTTTCCTTTATCCTA TATGATATTCTACAAATTTCAGTGGGGAGAGTATGGAGAATGCTTTAAGAGCTTGCTGTAAAGGTATCAAGATTGGGAAA ATTTTAATTCACAGAGAAGGTGACAATGGTCAGCAGGTTTGTCCATCTGCACGTATGCTTTGATGCGTATCATGTTTCAT TTTTTCATCACTGACTTCTTATCCTTTAATCAAATGAACAGCTAATATATGAAAAGTTACCAATGGATATCTCAGACCGG CATGTGTTGCTGTTGGACCCTATCCTCGGCACAGGTTTGTTATTCTCTTGTTTGTCGTCACCCTTGTTCTGAAGTTTCAA GTGTCTGCAGACTATTGCAACTTTATTATAGCTACAAATTAATTAGTATAATGAGAGTGGATTGAAAATTGTTTTTTTGT TTGCTGATTTTCATGTTTAGGTAATTCGGCTGTTCAAGCAATTTCTTTGCTTATAAGAAAGGGTGTACCAGAGTCCAACA TTATATTTCTTAATCTCATATCTGTAAGTTGACAGTGCCTTAATCTCTCTATATGTCTTGCTCTTTTATTGAATTATGAA TGTTTTTCCCTTGCTTCTTTTTTTGATGAGTTGCATTTATCTTCTCATGTTCAGGCTCCTTTAGGTGTGCATGTGGTATG CAAAAAATTTCCAAAAATTAAAATAGTGACATCTGAGATTGAGATAGGTTTGAATAAAGATTTCCGTGTCATACCGGGCA TGGGCGAGTTTGGCGATAGGTACTTTGGAACAGATGATGATGAACAACTGGTGGTTCCTTCCCAGTAG
CDS sequence (LotjaGi6g1v0139200.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGCTAAGTCAGCTTTAGATTTAATGGAGTCTTCATCAGAAGTTCATTTTTCGGGATTTCACATGGATGGTTTTGA GAAAAGAGAGGCCAACACTGAACAACCAACAACATCGGCAACTGACATGTATAAACAACCTTTCATAATAGGTGTTGCTG GGGGTGCTGCATCTGGCAAGAAAACAGTTTGTGACATGATTATTCAGCAACTTCATGACCAGCGAGTTGTCCTTGTTAAT CAGGATTCCTTTTACAATAACTTGACTGAGGAGGAAGTTACAAGAGTGCAGGATTACAATTTTGACCATCCTGATGCTTT TGATACTGAGCAATTGCTACTTGTTATGGACAAGTTGAAGCGTGGCGAAGCTGTAGACATCCCGAAGTATGATTTTAAAA GTTGCAAGACTGATGTGTTAAGAAGGGTAAACCCTTCAGATGTTATAATTTTGGAAGGGATCCTTGTTTTCCATGATCCA CGTGTTCGGGAGTTGATGAGTATGAAGATATTTGTTGACACAGATGCTGATGTTCGTTTGGCAAGAAGAATTAGGCGTGA TACTAATGAGAAGGGTCGGGATATTGGAACTGTTCTTGATCAGTATTCAAAATTCGTGAAGCCAGCTTTTGATGACTTTA TTCTTCCAACAAAGAAGTACGCTGATATAATTATACCCCGTGGAGGAGATAATCATGTGGCCTGTGATTTGATTGTACAG CATATCCGCACAAAGCTCGGTCAGCATGACCTTTGTAAAATATATCCAAATTTGTATGTAATTCAGACAACTTTTCAGAT ACGGGGAATGCATACTCTGATCCGTGATGCTCAAATAACAAAGCATGATTTTGTATTTTATGCTGATCGTTTGATTAGAT TGGTTGTAGAACACGGCTTGGGGCATCTTCCCTTTACAGAAAAGCAAGTTATCACTCCCACGGGTTCTGTATACACTGGT GTGGATTTTTGTAAGAGATTGTGTGGTGTCTCTGTCATCAGGAGTGGGGAGAGTATGGAGAATGCTTTAAGAGCTTGCTG TAAAGGTATCAAGATTGGGAAAATTTTAATTCACAGAGAAGGTGACAATGGTCAGCAGCTAATATATGAAAAGTTACCAA TGGATATCTCAGACCGGCATGTGTTGCTGTTGGACCCTATCCTCGGCACAGGTAATTCGGCTGTTCAAGCAATTTCTTTG CTTATAAGAAAGGGTGTACCAGAGTCCAACATTATATTTCTTAATCTCATATCTGCTCCTTTAGGTGTGCATGTGGTATG CAAAAAATTTCCAAAAATTAAAATAGTGACATCTGAGATTGAGATAGGTTTGAATAAAGATTTCCGTGTCATACCGGGCA TGGGCGAGTTTGGCGATAGGTACTTTGGAACAGATGATGATGAACAACTGGTGGTTCCTTCCCAGTAG
Protein sequence (LotjaGi6g1v0139200.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNAKSALDLMESSSEVHFSGFHMDGFEKREANTEQPTTSATDMYKQPFIIGVAGGAASGKKTVCDMIIQQLHDQRVVLVN QDSFYNNLTEEEVTRVQDYNFDHPDAFDTEQLLLVMDKLKRGEAVDIPKYDFKSCKTDVLRRVNPSDVIILEGILVFHDP RVRELMSMKIFVDTDADVRLARRIRRDTNEKGRDIGTVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVACDLIVQ HIRTKLGQHDLCKIYPNLYVIQTTFQIRGMHTLIRDAQITKHDFVFYADRLIRLVVEHGLGHLPFTEKQVITPTGSVYTG VDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPMDISDRHVLLLDPILGTGNSAVQAISL LIRKGVPESNIIFLNLISAPLGVHVVCKKFPKIKIVTSEIEIGLNKDFRVIPGMGEFGDRYFGTDDDEQLVVPSQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 16 | 468 | 453 | 2.6E-274 | – | |
| PANTHER | 16 | 468 | 453 | 2.6E-274 | – | |
| SUPERFAMILY | 36 | 238 | 203 | 1.86E-43 | ||
| Gene3D | 43 | 248 | 206 | 7.2E-64 | – | |
| TIGRFAM | 45 | 245 | 201 | 1.1E-70 | ||
| PRINTS | 47 | 64 | 18 | 3.4E-28 | – | |
| Pfam | 49 | 233 | 185 | 2.0E-44 | ||
| CDD | 49 | 245 | 197 | 4.55346E-104 | ||
| PRINTS | 77 | 88 | 12 | 3.4E-28 | – | |
| PRINTS | 122 | 137 | 16 | 3.4E-28 | – | |
| PRINTS | 177 | 187 | 11 | 3.4E-28 | – | |
| PRINTS | 191 | 202 | 12 | 3.4E-28 | – | |
| PRINTS | 213 | 226 | 14 | 3.4E-28 | – | |
| SUPERFAMILY | 248 | 465 | 218 | 2.62E-58 | ||
| Gene3D | 249 | 464 | 216 | 1.2E-81 | ||
| Pfam | 263 | 464 | 202 | 1.7E-70 | – | |
| CDD | 322 | 437 | 116 | 7.82231E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Nucleoside metabolic process | The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine). | ||
| Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. |
Expression pattern of LotjaGi6g1v0139200.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…