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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0150600 |
| Transcript ID | LotjaGi6g1v0150600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein; TAIR: AT3G18670.1 Ankyrin repeat family protein; Swiss-Prot: sp|A2CIR5|NPR4_ORYSJ Ankyrin repeat-containing protein NPR4; TrEMBL-Plants: tr|I1N0F2|I1N0F2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0150600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:42645429..42651256) extracted from Lotus japonicus Gifu genome v1.2.
CTTGAAGGGGACCTAAAATAAACCCACTTGAATTTTTTCAAAAGAAAAAATACTTATTTTCTTAAAAAAAAATTGTAATA CAAGATCTACAACAAATTACAGCACTTTTTAATGTGAAGCCTTTCTGCTTTCAAGTGAGTAGAATTGCTTATTATGAAGA ATCAGAAGCCAAAGCACCACTCTGAGGTACCCTATTGATCGGTTCTCAACTCTTCGTATCTGCACATTAACGTTAACGCT CAAACTCAACGGTATGTATTGTTCCATTGATAAATCCTCACATCTTAGAATTCATAGTGAAGCTAAATTCTTAGTTTCGT TGTTTCCTGATTCCCATTCATTTTTAAATGCACCCCACCTGTTTGATGAAATGCCTCATTGTTATCTTATTTTTGTTTTC ATTTATTATTACAGTGACATTCATAATTATGATCATCAATGTGTTAAGTTTATTGCCACTGAACTCAAACACACAATTTT GTATCACTGATCAATGGTGTCTTCTTTTGTGATAGGTGGTTTAGCAAATGGTGGTGTGTTTTCCATCAACACCAAAGAAA CTGGCCATGACCATTGCGTGCTTCCTCTGTGGTGGTGCAGGTTTAGCTGTTGGGGCGCACCTCTCTTACGTCAATGTTGC TCCCCAGCGGGATCGAACCTTAGCTCGCGATGATTTTGTTAGAGAAACGTTGAGGAAGAAGTATGGTTACATTCCCCCGA TGCAGGCTCGAAACATGGCTCGCAGTGATTCCACCAAACAACAGTGAATGACTTTTGAGTTTTAAATCACTTCATCAAAT GAAGAATAAATGCTTATTGCCTATGCTTTTCACCCTATTTATCAATGTTTATAGTTGTGCCCTTCTTGAGTTTCTGCAAC TTTATAGTTGTGTACTCTTGATATCAAATGTGTGTATGGGTAGTGTATTTTAGAGATTATTATTATTGTTGTGAAATAGC TGCACTAATGTTGCAGACATCAACTCGATCAGATGAAGCCATTAGTTTGATTCCTTATGGATATGTCACCGTGGATAATT CATTAGTACTCACTCAATGAGATTCTGTTCTATTGAAGTAAAAAGGCTAGTAACTAACTTGAAAATAGGGATGTTAGGAG TTAGGACGGTTTAAAAGGAAAGACCAAATTTGAAACTACTTGAGGAAGAAAAGTGCCACAACTAAATGAAGCCAGCTAGG GAAGTACATTGTAATGAGTATGACCATCATGCAGCAGATAAACAATTGTTAGTACTGCACAATTGTACACTTCCAATTGA AATATAATTTGTCATCTTCAGCTTCTTATTTTCTTTCTGGTAAAGCATAGGATAGATATGGAGATATACAAAATATTGCA GTTCAAAATTAGGATTTCAAGTAATTTTGCATAGCCTACAAAGAAAGCATCTCCAGCTCCTATATCTTGAAGAGTTTAAT GAGTGTTCTTGTGTATATTTTCCTTCATCTTCTGCAGCTGCTCATGATTATCCATTGAATCAGATTTTAGCTTCCAAAAC CAAGATAATTTTATTGTAGAAATGTCATTTGCAGGATGATACATGTTACATGGTCTAAAATGAGGAAATGGGGTTGAATA AAATGAAGAATGTAAGAGGGGCATGCAATAACAGTGAGAAGGAGGAAGGAGGTTCAAAGAAGAAAGATGCAAGGAAACAA CTTGAATAGAATTTCTGCAAACTCAATTAAGGTCTTCTATATGTGTCAACAAAATCAAATTTCTATCCGGTCACTGTTTA TGCCGATTATTTCGGATTCAAAATTTAGCCACAGTTAAAGCTCTTCATCCCTCCCCATGGGTGTACTCAGCTTGCGTTGC CAACTGAACTGATTCTCGTGAGTAAAATTAAATTTCTATGCTATTAAATAACATGACAAGTAATTATATTGAAATAGAGG TGTTCTGAGGGTTAATAAACATAAAAGCCAAATTAGAAACTTAATGAGGAAGGGTAACATGAGATGCATTGCTTTTACTT TTTTCTAGGCAAGTGCATTATTCTCACCAGTGAAAGGGAATGAAAAGTTCAGCAATAGTGGAAACGAGAATCAGCACTGT GCTCCCCATGTCTTTAAAAAAGCAAAAAAAGGAATATTTAAGTTAATACTGCACAAATAACAATACACACAAAAATGTAA GAAAAGAAAAGAGAAAAAAAATGCAAAAATGTAGTGTTCTTTCCGTTTGAAGTATTACTCATCCTCCTCAGCTTGTTCTT ATGTTCTTTCCATCAAAGGAAAGAAGAGTTTCAACTTTGCGTTGTGAACACGGAAAGCAAAGCATATACATGTCCAGCTC TTATAACTGGAACAGCTGAATGAGTGTTTTTGCATGTTTTCCTTCATCTTCTGCAGTGGTTGATTATCCATTGAAGCTTT CAAATTTGCAGAACAAATGTTACTAAAAGAATCAAGTTCACTGATGCCTGACGATGATGTCAAGGCTGCTATTACTGAGT TTGGTATGTCATTTCCTATCCATTATTACAAAGAAAAAAGCATCATCTGCTTCAGTATATATAGGATTGTGCTCTATGAT TCTTGTTTTTCTTAAGAAAAAGGGATTCTGAAACAAACCATGGGATTCGTAGAAATAAAATGATTTCTAGATTGGGATAG TAGGCAGTAGGCTTCAAAATTTTGTGACTTTGCGGTCACAGCTTCGAGTTGTGGAATCAGTCCATTGCAAAGCTTAGCAA GAGAATTTAAAGTCTAATCTCTTTTATTTTTGTGTAAAGCTTAGCACTTCTTGATTTAAGTTTGCTATAGATTATGACAT ATTCAAATGTACATACTTGATTCAGATTGAGATCACATGAGACATTTTTACTAAGTGCTGTTTTGCAAAGAAATGTTGTC TTTTCCATATTACAATTTCCCATTTCCATACAACTAATGTTGTTACTAACCATTGGCAAAAGCTAGGGGATTCAACCACA GTTACTACCAACCCCTGCACATAGCAATACTAAAAGGCGATTGGAAATCTACAAAGGCTTTCCTTGATAGAGATCCAAGT GCATTGACAGCAAAGATTACCATGATTGGCAGGACTGCACTTCATGTTGCGGCGCTCGGAGGTCAGTGGCGGCTTGTTGA GAAGCTGGTGCAACATGTGCCGGCACATTTACTTGGAGAACTTGACTTGATGGGTTGTACTTGCCTACACTATGTTGCAA TGGGTGAAAGCATAATGGCAGCCAAAGCATTGGTGGCTAAAAATCCTTCTCTGACACAAATTATAGATTTCAGAGGTTCC ACACCACTCATCTATAGTATTACCTCTACCAGATGTAAGGAGATGGTGTGGTATCTTGTCTTGAACACTACAGATGAGAG ACCTGGTTCTCCATTCTCTGGTCCTTCTGCTGGTCTGCTTGTGGCTTTGCTTACTGCTGCCGGATTGCATGGTAATCCAA ATGCTTTGCTGAATAGTATATGCAACTATGCAAGTGCGTGTTTAGAAACTCGTTCGAAAATCACGGTGAAGCTAAATGGT GGACAGAAGCAAAAGATAAGTAAAGTTACTTATTTCTGTCCACCATGATGATTTTTTGTTTCACTGTGGTTTCCGAACGA GTTTCCAAACATCCAGCAAATGCTGAATAACTTAGCACTTAGAACAAGCTAATAACCATGTTTCTACCCCTTCAATATAT CCTTTTATAACTTCTTTCTTTTTGGGGGGCTCTCCCATCATCCTATGTACAGATATCACCATGTATCTTCTTCAGCAGTA CCCTAACTTGGCCACTATTTCTGATTCAAATGGAAGCACAGTGCTCAATGTATTGTCGAAACTGCCCTCGCATTTCCAAG GTGGAAATAAGCTTAGGTTTTGGGGGAAATGCCTTTACCATTGTAAGTACCTTTTTCTATAGGCGTGATTCTTTTCTCCT ACCATCCTTGATTGTAATCCTCTTCCACCATGTTGAAATTTTGACATTTCCTCTTCTTCAACTATGTAAGTTGTTCCCGT GGAACTTGATTACTTACCACCCAATCAGTTGAGAGGAGATTTAAAAGATTCTTATGGGCAAAAATCAAGCCATACCCATT CTCATTTTGGAAGTACAATATGCAATGCACTTCAAAATCTTGGTATGTTGTACATCTAACCTCTAACTCCCTAACATGCT TTTTCTCTTAGTTTCTGTTTCTCTTCAAAAATAAGTAACCTTATTTGCAGTTCCTGGTATAAAGCTAGTTCGAGATGCAA AGTTAAGACAAGAATCTGCTGTGAGATTGGTAGAATTTGTTTGCTCACAAGTTTCAGCCATGAACGACTCTCAATTCTGG CAGACTTTTGTGAGTGCAGGCATTATCTTCAATGCCGCATCATCTGGCATAGTTGAAATCTTAAGGATTTGTTGCCAATT TTTTCCTGATTTAGTTTGGACTCACATGCCAAATGAAGGGTACATAGCTCAAATAGCCATCAAGAACCGGCAAGAAAAAG TTTTCAGTTTTCTGTGCAAGATGCCAATCATTTGCAAGTTTTTAGTCTTAGCTTTAGATGAATCACAGAACACCACATCA CATCTGGCAGCAAGGTTTACTTCTCCTAAACTAGCATCAATTTCTGGTGCAGCATTTCAAATGCAGAGAGAGTTACAGTG GTTCAAGGTTTGTTCAATCTCACAATCGCCTTCTTAGTGCAGGTTTGGAAACTCGTTCCAAAACCAAAGTGAAGATAAAA TCATGGAGGACAGAAGCAAAAACTAAGAGAAGTTGTTTCTGCCCACCAAGATTTTGGTTTCACCATGGTTTTAGAACGAG TTTCCAAACATGCTAATTGTGAAGTACAATTCGGAAAAGATGTTGATAGGATGGGATGATGTCCAACAGGAAGTAGAGAA ATGGGATCACCCTCTCCATAAAGAAGTAAAAGACCAAGATGGTAAAACAGCTTGGCAATTGTTCAGGGAAGAGCACAAAG CATTGCTTGAAGAAGGGAAGAATTGGATGAAGGACACATCAAACTCTTGCATGATAGTGGCAACTCTTATTGCTACAGTG GCTTTTGCTGCTGCTATCACAGTACCTGGAGGCAACCAACAGGACAAAGGATTCCCAATATTCTTGCCACATAACACATT TTTAGTGTTTATTGTGTCGGATGCATTAGCTTTGTGTTCCTCAATGGCTTCTCTTCTGATGTTTTTAGCAATCCTGAATG CGCCCTATGCGGAGGAGGATTTTCTTAACGCATTACCCCATAGATTGATAATTGGTTTGGCATCTCTGTTCTTTGCCATA GTGACCACAATGATAGCATTTAGTGCAGCCCTGTCTTTGTTGCTCCAGGAGAGACTAAAATGGGTGCCAATTCCTATTGT TCTTCTGGCTTGTGTTCCGATCACTTTATTTGCAAGGCTTCAACTTCCATTGTTCATACAAATGATCATATCAACATATG GATCTCCCATTTACCATCATCAGAGACTTTGGTAAGGCGCTTCTGGTCTATTCTATAGCTCATAAGAAACAAGACAGCAA GGAAAACAAGACAAAATCAAGTTGCTATGTCTCTTTTGTAAAGCACCCTGTCTCGTCTATTAAATTTGTGTCAAATATAT ACACATCAAATTTAAATTTTCCCATTCATTCTTTTATCTGTTAAACCTTCCCATTTACCTATTCCAAAAGCATCCAAGGC TCTCTCTCTCTCTCTCTCGCTGGTCTGTGTTTCTCTAAGTTTAACATTATTGAATACCAAAACCTTGCTCTACACCATTG GATAAACAGATAATCAGGGAATACAAATGCTGATACTAAATGTCTCTTATCAAATAAGTATATGCAAG
CDS sequence (LotjaGi6g1v0150600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCAAAAATCAAGCCATACCCATTCTCATTTTGGAAGTACAATATGCAATGCACTTCAAAATCTTGCTAGTTCGAGA TGCAAAGTTAAGACAAGAATCTGCTGTGAGATTGGTAGAATTTGTTTGCTCACAAGTTTCAGCCATGAACGACTCTCAAT TCTGGCAGACTTTTGTGAGTGCAGGCATTATCTTCAATGCCGCATCATCTGGCATAGTTGAAATCTTAAGGATTTGTTGC CAATTTTTTCCTGATTTAGTTTGGACTCACATGCCAAATGAAGGGTACATAGCTCAAATAGCCATCAAGAACCGGCAAGA AAAAGTTTTCAGTTTTCTGTGCAAGATGCCAATCATTTGCAAGTTTTTAGTCTTAGCTTTAGATGAATCACAGAACACCA CATCACATCTGGCAGCAAGGTTTACTTCTCCTAAACTAGCATCAATTTCTGGTGCAGCATTTCAAATGCAGAGAGAGTTA CAGTGGTTCAAGGAAGTAGAGAAATGGGATCACCCTCTCCATAAAGAAGTAAAAGACCAAGATGGTAAAACAGCTTGGCA ATTGTTCAGGGAAGAGCACAAAGCATTGCTTGAAGAAGGGAAGAATTGGATGAAGGACACATCAAACTCTTGCATGATAG TGGCAACTCTTATTGCTACAGTGGCTTTTGCTGCTGCTATCACAGTACCTGGAGGCAACCAACAGGACAAAGGATTCCCA ATATTCTTGCCACATAACACATTTTTAGTGTTTATTGTGTCGGATGCATTAGCTTTGTGTTCCTCAATGGCTTCTCTTCT GATGTTTTTAGCAATCCTGAATGCGCCCTATGCGGAGGAGGATTTTCTTAACGCATTACCCCATAGATTGATAATTGGTT TGGCATCTCTGTTCTTTGCCATAGTGACCACAATGATAGCATTTAGTGCAGCCCTGTCTTTGTTGCTCCAGGAGAGACTA AAATGGGTGCCAATTCCTATTGTTCTTCTGGCTTGTGTTCCGATCACTTTATTTGCAAGGCTTCAACTTCCATTGTTCAT ACAAATGATCATATCAACATATGGATCTCCCATTTACCATCATCAGAGACTTTGGTAA
Protein sequence (LotjaGi6g1v0150600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKNQAIPILILEVQYAMHFKILLVRDAKLRQESAVRLVEFVCSQVSAMNDSQFWQTFVSAGIIFNAASSGIVEILRICC QFFPDLVWTHMPNEGYIAQIAIKNRQEKVFSFLCKMPIICKFLVLALDESQNTTSHLAARFTSPKLASISGAAFQMQREL QWFKEVEKWDHPLHKEVKDQDGKTAWQLFREEHKALLEEGKNWMKDTSNSCMIVATLIATVAFAAAITVPGGNQQDKGFP IFLPHNTFLVFIVSDALALCSSMASLLMFLAILNAPYAEEDFLNALPHRLIIGLASLFFAIVTTMIAFSAALSLLLQERL KWVPIPIVLLACVPITLFARLQLPLFIQMIISTYGSPIYHHQRLW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 6 | 24 | 19 | - | – | |
| Phobius | 25 | 210 | 186 | - | – | |
| PANTHER | 30 | 356 | 327 | 3.4E-175 | – | |
| PANTHER | 30 | 356 | 327 | 3.4E-175 | – | |
| Pfam | 202 | 313 | 112 | 1.2E-30 | ||
| TMHMM | 210 | 232 | 23 | - | – | |
| Phobius | 211 | 229 | 19 | - | – | |
| Phobius | 230 | 248 | 19 | - | – | |
| TMHMM | 247 | 269 | 23 | - | – | |
| Phobius | 249 | 278 | 30 | - | – | |
| Phobius | 279 | 289 | 11 | - | – | |
| TMHMM | 290 | 312 | 23 | - | – | |
| Phobius | 290 | 316 | 27 | - | – | |
| Phobius | 317 | 321 | 5 | - | – | |
| TMHMM | 322 | 344 | 23 | - | – | |
| Phobius | 322 | 341 | 20 | - | – | |
| Phobius | 342 | 365 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0150600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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