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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0151400 |
| Transcript ID | LotjaGi6g1v0151400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sodium/hydrogen exchanger; TAIR: AT5G55470.1 Na+/H+ (sodium hydrogen) exchanger 3; Swiss-Prot: sp|Q8S397|NHX4_ARATH Sodium/hydrogen exchanger 4; TrEMBL-Plants: tr|G7J1F4|G7J1F4_MEDTR Sodium/hydrogen exchanger; Found in the gene: LotjaGi6g1v0151400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:42799717..42805133) extracted from Lotus japonicus Gifu genome v1.2.
AACTACTTACATATTAATAGGTGGTGTTGAAACAACTTTGTGTTTGTGCAGACGCTTCATTTTCATCAAACATCATATTT AGCTAGTTAACAATGGCGGCTATGGTGGCGGCACTGAACTTGACAGATGGTGAGGCGGCGAGCAATCTTGCTCACGACCA TGCACAGGTGGTTCCTATCTCAATCTTCGCCGCTGTTCTCTGCCTCTGTTTGCTATTTGGTCACTTGTTCGAAGGAAATC GATGGCTTAATGAATCCATTGTCGCCATTGTAGTGGTAATTGACACACAATTCACTTTCTTCTTCCTTTACATTACTCAA ATCCATGGCACCAATTTGTTTGGATAGTTTTATTAGGATTAAGGCAAACCTTGTACTACAAACCTCCTTTATGAGGTTCA AGAGGTCAAACCCACTTGTGAATTTAATGTAAACAGTTTTTTATCTTGCAATGCAAGAGGCTGATTCCACGACTCGAACA TGTTCGCAATGTTTTATGGCAGCAACTGTACCGTTGCATCGAGCACTTTTTATTAGGAAGGATTATAAAAAGAAAAATTA ATTTGAATACAAACTATCATTTAGGCCTCTCAATAATTAACTGAGATATCCCATGCTTCATAGTCTTAACATTCTCCTTT GTTTGTAGGGATGCATTGCTGGAATTATACTCTTACTACTTACAAAGGGGAAGAGTTCTCACATCCTTATATTTGATGAA GAATTTTTCTTCTTATATCTCCTTCCTCCCATAATATTCAATGCAGGGTAAAAGCTTCTGTCTTGTGTTTAGAAGCTCTT GTGTGTCCAATTTTTTTAATGATTTTAATATATTTATCCTTGCTAACAGATTTCAGGTGAAGAAGAAACAGTTCTTTCAT AACTTTCTAATCATCATGTTATTTGGGGTGATTGGTGTTTTCATTTCATCTTTAATTATCACAACCGGTAATGACTAAGC TCCTAGTTTTCCTTTCCTGAAATTAATTGTAGCACTATCACTGAAAATTTACATGGGATTCATTATTCACCTATTAAGCA TTTGCATTTGGTTCACCTAGGCAGCTGGTGGATATTCCCCAAGTTGAACTTCCTTGGCTTGACTGTGAGAGATTATCTTG GTGAGATCATTGCATCATCTCAATTTACACAAATAGATACTATATTTATAATGTTTCATGACCTATATATATCAGATTTT GATGGTAATTAACCTATTTTAATTTTAATCAGCTATAGGAGTGATTTTCTCATCCACCGACACAGTTTGCACGCTACAGG TTGGTTAGATTGGTACATGACTTTCCTTAAAAAAATAAAATTTATTTTTCAAATAACGTACCCCGCAACTCTTTTTTTAT GGCTTACCAGCTTTGCTTTTAGTTTGAAGAAGTTTACTTGCAATTTGGTATTAATGTTTAATAGGTTGCAAAAATGTTAG AAGGGGCAATGTGTAACATACAGAGTAATTAACATTTTTTGTGTTTGGATACCAGTTATGTACAAGACGAAAGATTCATA AGAAGAGTTTCATTCACTTTTTAAAGTGTTTGCTAGTGTCCATCCATTTACACTTGAGCCAACGGATATCTAAACATAGA AATTAATGTTAACTAAAGTTTAATGTTTTCATTTTAAAACAAAGTTGAGGTTAAGTAACTTTATTTTGAGGTTGTTATTT GAAAAGGTGTGGAACTACTGGGACCTGTTAGGTTTCTTGATTATTATAGTCCCTAAAGGACTATTCATGTAATTATACAC ACATGGTCAACAATGTATCTGCAATCTGCTGTAGGTTCTCCATCAAGATGAAACACCTTTACTATACAGCATAGTCTTTG GGGAAGGAGTGGTAAATGATGCAACATCAGTTGTTCTCTTCAATGCAGTGCAAAAGATTGATGTTTCAAAGCTTAATGGA AAGACGTTCGGCGTTCTTGGAAATTTCTTGTATCTATTCTCAGCAAGCACTTGCCTTGGAGTTGTAGTGAGTTCCAGTGA TGAACATTGCATGCAGATATTTTTATGTGTGTTATCACATGACTTTACATATTTCAATAAATCCTCTAGTTTAGTTGATA GCACTGCCTTCACATAAAAGAGCATTCATGACTGAAGTTTACTAGTTTTTGTTTTGCTTCTATTATATAGTTTGTCCTTG GGAGTTGGGAATTCATATTAGGTTCAAAATATTGTTTGCATTTTCAACTCAGATTATTATTATGGATTTTCTTGCTGACT TGTAATGAATATCAATCATGGAATTTGTACTATTTGTTTCTTATAGAAAAATAAGTTTCCTTAGAGAAAAGATAAGGAAA GTTCAATTAGGGTGAACATAAAGTATCCTCTTAAACAAAAGGCCTAAACCAGATAGAGAAAAACAAGAAACTAAGGGTCT GATTGATTTAAGGAAATGATTTTTGTTTTTATTTTCAGTTTTTACTGATAATTACAAAAAATACTAGCTTCTTCTCACTT TCTATGCTGCTTGCAGAAATTTGTATAAGAAATGATACAAATCCTTTAAATCAGGATAGAAGAGAAATTAAGGTGATAAA TTGGATTTCTAAATGGTCTTTCAGGGAGAAAATTATTAAGGTTAGGGGAATTAGTATGGAACTTAAAAGGATTTGCAAGA AAATTCTCCAGAAGAATCCAAAGTTTCCTATTTGAATTACTAGAAAGTGTCAAGTAACCACTTATCCCAAAAAGCTTAAG TTTTTGGGTAAGGGTCATATCAATGGTTTTACATTATATTCTAACACGCCCCCTCGCGCAAGAGCCCTTTGGGCTTGAAG CGTGGAGAAATGCACAGGCCCACCTACCATGTGCTTAATTAAATTCCACTTTTTAATTAGAAAGTGAGGAGAGCAAGGAT CGAACTCTAGACCTTTCAGCCATAGAGGCTCTGATACAATGTCAAGTAACCACTTATCCCAAAAGCTTAAGCCCTTGGGT AAGGGCCATATCAATGGTTTTACATTATATTCTAACAGAAAGGTAGTGGAATTAAGAAGAGCAAAGTGTTAGTGAATTGA AAATGCATTCATTTATTTTAAACTAATTTTCAAACATTGTTATTAGTCCAATGCAACTGAATGGATGGTCCTTCTTCCTT TTCTTCTACTATCATTTCTTTAAATCAATTAATGCATATTTCATGCAGGCTGGACTTCTCACATCATATCTCTTGAAAGC CTTAAGCTTTGGAAGGTTTGTATTATTGTTCTCTAAAAATTCTCCATGATGGTATTTTCAGAATGATCTGAAATGTGAAT ATCAAAGTTTAATGATTTCATTTCAGATTCTGGAATTAATGTGGAGAAATTTTAAGTACATGTTAATAAATTTATCCCTG CTTATGCCTGCAGACATTCAAGTGTTCGTGAAGTTGCATTGATGGTGTTAATGGCATACCTATCCTACATGTTGGCAGAG GTATTGTAAAATTGTACTTATGATAAAGTTCAAACTAAAACCTTCTATATTTAGTTAATAAATAACTACCCTTTTTGTCA TCCATCTTATCTGAAAATTCTAACACAGCTACTCGAGCTAAGCGGAATCCTTACTGTTTTCTTTTGTGGAATATTTATGT CACATTATGCATGGCATAATGTTACCGAAACTTCACGAATCACAACGAGGTATTGATTGATCCATCAAAGATTTAGTAAT TTCCAGATTCTATGTCTGAGATTTCTGACTTGGTTTCCCTTCTCCAGATATGTGTTTGCAGCAATGTCGTTTATCGCAGA AACCTTCATATTTCTGTATGTGGGCATGGATGCACTTGACTTGGCGAAGTGGAAGATGACAGAATTGAGGTCCTAATCCT TTCTACAAGTTCGGTTTGCATTATCTACTTAATGTTGTATTTCTGAAATCTTCTTAAGAATAAATTGTGAGATACATTGC ATCATATCACCTTAGCACCCATCCGTAATAGCTCTGTTTCAGTAATCAAGATTCTCCTGACAATTTCTTCTTCTCTGCAG TTTTGGAAATTTGATGGGAATTTACAGCAGCTTAATCTTTTTGATATTGCTTGGACGCGCCGCATTTGTTTTCCCTCTCT CTGCGTTTTACAATTATATGAATAGGCGTTCCGAACAAACACCAAGTATCACATTCCAACATCAGGTTATTAAACAAGTT TTGTGTGATATTCTCAGACTGCTGGTGTTACAGTTAATTGAGAAAATATTCTGAAATTATTTATTGGCATCGTGACGTTG ATACATCATACAGATAATCATTTGGTGGGCTGGTCTAATGAGGGGAGCAGTCTCCATTGCTCTGGCTTTCAAACAGGTAT GTGTATGAAATTTAAATTTATAGACATTACAATTGGGAAGAAATTTTTTGTTAAATAAGCATGTTATACAAAAGACATGC TGAAAAGTGTTTCTCAATCCATTATCTAGTTTTGGAGATTTCTATGGAAACCTTAAGTAATTTACAATTGGATTATGTAC GGTGATGCATTAATGAATAATACCACGGTACCTTAAGAAGGAAGCAACATTGAATTATCCTCTTGTTTTTGCAGTTCACG TATTCTGGGGTTACTTCTGATCCAGTTAATGCAACAATGATTACCAACACTATTATCGTTGTCCTTTTCAGCACGCTGGT GAGTTAACGCATTTCTCTTAATCTTGAAAATAAGTACAACTTGGAATGTTTCATAGTGAAATGATTTCATGCAAATCCTG TTATCCATCTTGGTATAGTTTAATCTTATAATTTGGTCTAAGATTTAAGTTATTGATATAGCATCAATATCATTTCAGGG GTTTGGTTTTCTCACAAAGCCACTGATTAGATATCTGCTTCCCCACACTACCACAAGGAGAAACATCAGCCGCGAAGAAT CCGGTCCACCCGTTGTGGATTTAAACCTACCTTTGCTATCCTTTGAAGAGTCGACAGCAACCAACATCAGCCGCGCAAAG GAGAGTTTGTCCATGTTAATAGAAAGCCCTGTGTACACCATACATTACTATTGGAGGAGGTTTGATGATTCCTACATGAG ACCGATATTCGGGGGACCGCGTCGTAACAACTCAGTTTGCTAGCCAGAAAGCAAATCATGTACACTCGGTGATGATGCAG TTGGAAAGCAAGTGGTAATCCATGTGAATCCAGTTTTGAAAAATGAACTAGCTTCCTTGAGCACTGTTTTGTGTACATAC TCAGGTGAAGAATACAGTAGAATCAGGAACCTGTTGTATTTAGAATCTAACACTGTAGGGTGAAGGTGAACTAACTTGAA ACTTTTGAGGAATTTAATATTTTCCTAACAGTTATGATAGTTGCAGCAAGTTGGCAACAGCAACTTTTGAGTCTATGCAT GCTATGGAAAATTTTGTGATTGGTTAATACAGTCCAGTTGAGATAATTTCATGAGCA
CDS sequence (LotjaGi6g1v0151400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGCTATGGTGGCGGCACTGAACTTGACAGATGGTGAGGCGGCGAGCAATCTTGCTCACGACCATGCACAGGTGGT TCCTATCTCAATCTTCGCCGCTGTTCTCTGCCTCTGTTTGCTATTTGGTCACTTGTTCGAAGGAAATCGATGGCTTAATG AATCCATTGTCGCCATTGTAGTGGGATGCATTGCTGGAATTATACTCTTACTACTTACAAAGGGGAAGAGTTCTCACATC CTTATATTTGATGAAGAATTTTTCTTCTTATATCTCCTTCCTCCCATAATATTCAATGCAGGATTTCAGGTGAAGAAGAA ACAGTTCTTTCATAACTTTCTAATCATCATGTTATTTGGGGTGATTGGTGTTTTCATTTCATCTTTAATTATCACAACCG GCAGCTGGTGGATATTCCCCAAGTTGAACTTCCTTGGCTTGACTGTGAGAGATTATCTTGCTATAGGAGTGATTTTCTCA TCCACCGACACAGTTTGCACGCTACAGGTTCTCCATCAAGATGAAACACCTTTACTATACAGCATAGTCTTTGGGGAAGG AGTGGTAAATGATGCAACATCAGTTGTTCTCTTCAATGCAGTGCAAAAGATTGATGTTTCAAAGCTTAATGGAAAGACGT TCGGCGTTCTTGGAAATTTCTTGTATCTATTCTCAGCAAGCACTTGCCTTGGAGTTGTAGCTGGACTTCTCACATCATAT CTCTTGAAAGCCTTAAGCTTTGGAAGACATTCAAGTGTTCGTGAAGTTGCATTGATGGTGTTAATGGCATACCTATCCTA CATGTTGGCAGAGCTACTCGAGCTAAGCGGAATCCTTACTGTTTTCTTTTGTGGAATATTTATGTCACATTATGCATGGC ATAATGTTACCGAAACTTCACGAATCACAACGAGATATGTGTTTGCAGCAATGTCGTTTATCGCAGAAACCTTCATATTT CTGTATGTGGGCATGGATGCACTTGACTTGGCGAAGTGGAAGATGACAGAATTGAGTTTTGGAAATTTGATGGGAATTTA CAGCAGCTTAATCTTTTTGATATTGCTTGGACGCGCCGCATTTGTTTTCCCTCTCTCTGCGTTTTACAATTATATGAATA GGCGTTCCGAACAAACACCAAGTATCACATTCCAACATCAGATAATCATTTGGTGGGCTGGTCTAATGAGGGGAGCAGTC TCCATTGCTCTGGCTTTCAAACAGTTCACGTATTCTGGGGTTACTTCTGATCCAGTTAATGCAACAATGATTACCAACAC TATTATCGTTGTCCTTTTCAGCACGCTGGGGTTTGGTTTTCTCACAAAGCCACTGATTAGATATCTGCTTCCCCACACTA CCACAAGGAGAAACATCAGCCGCGAAGAATCCGGTCCACCCGTTGTGGATTTAAACCTACCTTTGCTATCCTTTGAAGAG TCGACAGCAACCAACATCAGCCGCGCAAAGGAGAGTTTGTCCATGTTAATAGAAAGCCCTGTGTACACCATACATTACTA TTGGAGGAGGTTTGATGATTCCTACATGAGACCGATATTCGGGGGACCGCGTCGTAACAACTCAGTTTGCTAG
Protein sequence (LotjaGi6g1v0151400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAMVAALNLTDGEAASNLAHDHAQVVPISIFAAVLCLCLLFGHLFEGNRWLNESIVAIVVGCIAGIILLLLTKGKSSHI LIFDEEFFFLYLLPPIIFNAGFQVKKKQFFHNFLIIMLFGVIGVFISSLIITTGSWWIFPKLNFLGLTVRDYLAIGVIFS STDTVCTLQVLHQDETPLLYSIVFGEGVVNDATSVVLFNAVQKIDVSKLNGKTFGVLGNFLYLFSASTCLGVVAGLLTSY LLKALSFGRHSSVREVALMVLMAYLSYMLAELLELSGILTVFFCGIFMSHYAWHNVTETSRITTRYVFAAMSFIAETFIF LYVGMDALDLAKWKMTELSFGNLMGIYSSLIFLILLGRAAFVFPLSAFYNYMNRRSEQTPSITFQHQIIIWWAGLMRGAV SIALAFKQFTYSGVTSDPVNATMITNTIIVVLFSTLGFGFLTKPLIRYLLPHTTTRRNISREESGPPVVDLNLPLLSFEE STATNISRAKESLSMLIESPVYTIHYYWRRFDDSYMRPIFGGPRRNNSVC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 1 | 15 | 15 | - | – | |
| Phobius | 2 | 10 | 9 | - | – | |
| Phobius | 11 | 15 | 5 | - | – | |
| Phobius | 16 | 24 | 9 | - | – | |
| PANTHER | 17 | 522 | 506 | 4.6E-221 | ||
| PANTHER | 17 | 522 | 506 | 4.6E-221 | ||
| TMHMM | 24 | 46 | 23 | - | – | |
| Phobius | 25 | 43 | 19 | - | – | |
| Gene3D | 29 | 454 | 426 | 7.1E-12 | ||
| Pfam | 31 | 446 | 416 | 4.6E-58 | ||
| Phobius | 44 | 54 | 11 | - | – | |
| TMHMM | 51 | 73 | 23 | - | – | |
| Phobius | 55 | 73 | 19 | - | – | |
| Phobius | 74 | 78 | 5 | - | – | |
| Phobius | 79 | 102 | 24 | - | – | |
| PRINTS | 87 | 98 | 12 | 4.2E-9 | ||
| TMHMM | 88 | 102 | 15 | - | – | |
| PRINTS | 101 | 115 | 15 | 4.2E-9 | ||
| Phobius | 103 | 113 | 11 | - | – | |
| TMHMM | 109 | 131 | 23 | - | – | |
| Phobius | 114 | 139 | 26 | - | – | |
| PRINTS | 116 | 124 | 9 | 4.2E-9 | ||
| Phobius | 140 | 150 | 11 | - | – | |
| Phobius | 151 | 171 | 21 | - | – | |
| PRINTS | 156 | 166 | 11 | 4.2E-9 | ||
| Phobius | 172 | 177 | 6 | - | – | |
| TMHMM | 178 | 200 | 23 | - | – | |
| Phobius | 178 | 200 | 23 | - | – | |
| Phobius | 201 | 219 | 19 | - | – | |
| TMHMM | 220 | 242 | 23 | - | – | |
| Phobius | 220 | 241 | 22 | - | – | |
| Phobius | 242 | 252 | 11 | - | – | |
| Phobius | 253 | 270 | 18 | - | – | |
| Phobius | 271 | 275 | 5 | - | – | |
| TMHMM | 272 | 294 | 23 | - | – | |
| Phobius | 276 | 294 | 19 | - | – | |
| Phobius | 295 | 305 | 11 | - | – | |
| Phobius | 306 | 325 | 20 | - | – | |
| TMHMM | 306 | 328 | 23 | - | – | |
| Phobius | 326 | 344 | 19 | - | – | |
| TMHMM | 343 | 365 | 23 | - | – | |
| Phobius | 345 | 369 | 25 | - | – | |
| Phobius | 370 | 388 | 19 | - | – | |
| TMHMM | 388 | 406 | 19 | - | – | |
| Phobius | 389 | 409 | 21 | - | – | |
| Phobius | 410 | 420 | 11 | - | – | |
| TMHMM | 421 | 440 | 20 | - | – | |
| Phobius | 421 | 441 | 21 | - | – | |
| Phobius | 442 | 530 | 89 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Vacuolar membrane | The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell. | ||
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Biological process | Sodium ion transport | The directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Biological process | Regulation of pH | Any process involved in the maintenance of an internal equilibrium of hydrogen ions, thereby modulating the internal pH, within an organism or cell. | ||
| Biological process | Response to salt stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Molecular function | Sodium:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Potassium ion homeostasis | Any process involved in the maintenance of an internal steady state of potassium ions within an organism or cell. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0151400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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