Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0165400 |
| Transcript ID | LotjaGi6g1v0165400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein; TAIR: AT5G04700.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q9GKW8|AND1A_MACFA Ankyrin repeat and death domain-containing protein 1A; TrEMBL-Plants: tr|K7LA24|K7LA24_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0165400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:44951734..44957394) extracted from Lotus japonicus Gifu genome v1.2.
CTGTCATTGATCCTTGTTCTTGTTTTCACTCATCCGGTTCAAGTTTCAACTCTGCAAAACCATGTCTATGATGGATATAT ATGGTAAGTCCAAAATGGTATATGAGAATATGAGAATATTTATAAACTAGTTTTCTAATTTGCCAACTCTAGGCTTATAT TCGTTAGGCTCTTTTGATATATATTGACATCAAAATTTCTCCACAATTTTTTAATAATCTCTCTGTTTTACGCTAGAATG CATAAGCATCAATTTTTTGTCAAATTATTATATTAGTGTGAAACTTATTCATAGCGTCAACGTTTAGATCTTTTTTGAGA TGGTCAACGTTTAGTTATTAAATATTTAAACTGTCATGTATTGAATAGAAAGTGAGAATATAAACAACCATTTTTTTTGT TTTATGCCAAATAAAAAATTGTAACTTTTGAATGATTTGTTTGATGGATTAATTATATTCTAAACTTTGTTGTTTGTCAA TAACTCTAATAAGGTAAAAAGACCTTATATGCTTTTTTTCAGTTTGGGTTACCTATTTTTCTTTAAGAATTTGGTAAAAT CACCCGAGATTTACCTTAGGAAAATCACTCTTGTTGTTTGTTAATAATTTGCATCTTTTAGAGATTGATTCCCTGAAACT TTCTCTCCCAAATTCAGATATCACCCAACTCTTACAAGTTATTATTCAGGCGTCAATTCATTGTTGCTTGACAATGATTT GCATCTTGTTTTAAAATGAGTTTAATCCTTAGTTTTTTTTTTATATGCAAATGTTAGTTTTTAGTAAATTAGTACAAATT ATCCCTTCTCAGGTTTCGAATCATATCCCTTCACCTATAACTACCCTTCACTCACTTCAAGTAAATATGAGCAAAACCAC TCCAGGTTTTTGTTTTTTTAGACAAATGTTAGTTGTTAGTAAATTAATCTCTCCTTATAATTCGAACTCCAGACCATTCA CACATCATCTCATCCAACTCTTAGCTAACCCTTGGGGACACTAATTTTTAGTGGTATGGTAATATTTTGATATGTATGGT GAAATTTTATGCACAAAATATCATTAGAGTTAGAGTAATTTTTTTTGGTACATCGGAAAATGGAGCTAGAGTAATTTTAT ATCAAAATATGTACTTTCATAATGATTACAAGTAAAACAAAAATGTTACTAAATTTAATATATCTAGAAGTAAAAAGGTA ATAATTTTATGAGTGTGTTACAGTGAATAAAGAGCAAAAGAGAAAGTTCAGGGAGGCAGTAATCGAAGGCCAATGGACGC AACAAGTGATTCCGATGTTCGAACAAAGCAATTCCTACCACAAGACCCAAATCAAAGGCAAAGGCACGGCGTTGCACGTG GCGGTGAACAACGGCAACGCCGACGTTGTGCGGAGGCTCGTGGAAGCGGTGGTGCAGCACGAAGGAGCAGCATCTGGAGG AGAAGAAGGAACCAGCGCCTTAGCAACGAGGAACGAGCAAGGGGCGAGTCCTCTGCACCTCGCTGCGCGGCGAGGGTTCG ATGAGATCTGCAAGTGCATCATCGGAGCCGGTGGCGAAAGGAGGAGTTTGATGTGTGTTAGGAATGAGAAAGGCGAGACG CCTCTCTTCTCCGCCGTGAAAACACGGCAGTTGAAAACGTTTGCCTTGCTCTATCAGTTGTTTCCCAATGATACCAATCT TGCCATTAGAAACAAGGATGATAGCATCCTTCACATTGCAATTCGAAGAGAATTTTTAGGTAACTTTTCTCAACTTGAAT GTTTAAAGCAAATAATTGATTTTCAATTAAAGCTGTTTTGGTTTTCAGTTTGGAAGTCTGTTTGAGACATTGGAATTCGA GATCACACATTCCAATGCCGCGAATGTGAAAGAGGCTTTGGACCTCTGTAGGTGAAAACACTTTCAAACTGAAAACCAAA CATGCACTGGTTTTTGTCATTTGACCAGTTTGACCGATGGCATGGGCCGTCTGCGTGTAGGTTTTATCTGATGTGGATTT TTTAAATGTTTTTAAATTCTTATGTAGCACTTGGAATAATTGTCCACTTAGAATTCCAATGAAGCATTAATTAATGTATT TCCATATACTTGAAACGGAGGGAGTACTTGTATTTAGTTTACTCATGTTTAATCTCAAGTGGTAAGAGTTGGGGACGCAT GGATTGGGGAGAGGAAAGTTCAGGGATCGATCATTGGAGGTGCAATTTATTGACAAAAAAATTCACTCCATCTAGCATGT TTACCATTGCCATCCCTAATTGCATTGTAATTGTTCAAACTTGATAATGTAAATTAAGCATTCATGATTTTTGCAACAGA TATGGCAGTTATAATAGTGCATTGCTATCCTGTACTTTTGGACTTGCGGAACGGTGATCAAGCCACTCCTCTTGAAATTA TTGCAGCTAGGCCTTCTGCGTTCAAGAGTGGAACTTATCTCACTTGGGGGAAGCGAATTCTGTATCACTGTAAGTGCAAA TGTTTTGATCTTATTAAAAAGGATTTTACATTGAGTTATTTTTCTTGTTACAATCCAGAATGTTATTTAACTTCGCCCTA ATTGAGTATTGAGTATTAATATTATCCATTCAAAAGCTTAACTATTAAGTCATGGAATAGAAAAGCTTAACAACTATGTT TGCAGCCAATGCTTAGTTTTATCTAGTATTAGATTTATCTACATGGTCAAAGAGGCAAAACTTATCAATCGGATATTAGA TTTGTTGGTAAATTTGATACGGCAATGTTACCTATGTAGAGAATCGAGTGTGTGCCAAGTTCATATACTTGAGCACTCAT AAGGTGCAAATGAAAGCACCAGAGTGTGAGGTTAGAGTAGATTAAGGAAGCTTGAGTTGTGTTATTTTTGTGTAAGTAAT ATGGTTTTTAACAAACATAAAGTTATGTGTAATAAATTTAGTGTTCACTCATCCCGTCATTTTTTTTTCTCGATCCTACA TTATTTATAATAAAAAGTTATGAAATTTCTGACTGAGTTATCTGAAATTCTATTAATCCATCTAGGATAGAGTTAAATCA CACTCATAAATCATTTAGTCAACACAAAAATTAATTATAGTAAAAGTGAATTTTACCGTGCTTGTCCACGTGTGTGAACC TTGTATGAGAAAACATGTTTGATCATTGATGGGCTCTCCTTTTTACTTCTGCTGATGTATTGGCGTCTGTGTCAATTTCT TCTTAATGATTGAAGTATGTTTAAAAACAAAACTAGAGAATCTTTAAAGGTGAAAAAATTTGAAGGACCAATGATTCAAT ATTATGAAATTTATATATATTCTGGTTGGTGGCATAAGAATCTTATTTGTGTTAAAATGAAAAAATCCATCAAAAACACC ATTCTAATGTTCTTTTTTAATAATTTTTTTGTAAAAGGTATATATGTAAAACCTCTGGATGCAAAGACTGCAATGAAACG GTATTTGACGTCTGAGGGCGTTGGAAAAAATCGTAACAAAGCAAGCTCCTCCATTATAGAGAAAGATAAGAGTCAAGTAG CAATACAACTAGGCCCAGTTGATACCTCCCAAGCAATATCAGAAAAAGAAGACTGTGCACGATATGCAGATATTAATGTC CTCTGTTTTCAGTTTGCAGACATAATTCAAAAGTTAGTGTTCATATTCTGTCTTCCTTGGCTATCACTATTGGGCATCTC AATAGCAGGTACACTTGTATATATGCCCCTCCTCGTGCAATTTGCTTGGTTTTTCTCTACTTACACAATTGCTGATCTCT CTTTGCTTTGAAGACTTGGTGGCAATATATAAGTTGAAGCAGAAGCACACATGGGCTAGTCAGCTGTTGAACAAATTTAT GGAAAACCCTTATCAGTCATACATGGGAATCGACGGTAATAATCCACTGCATTATACGGAAGATCATGATGAAGAAAAAG ATGATGAAGAAGGGAAACTCTGGGATGTTATAAACCAAATACGTGAACAAAGTAAGGAACAAATTATATCAAAGTGGAAT ATTTCGAATTTGGATTCACTGCAGCAGATATCTTCTCATAATTATAGCCATTAATTTTTTCGGTTCACGGTTTAAATCTT TCTAAAGAAAAATAGATTATTAAATTAGAAAAATTTATGGTCAATTGTCTGGTGCAGAGGCTGGATCCAAATTCGAGTAT GACAATACAAGTGTATAACTATCCACATATCACCTCTCCTTTTTAATTTTTTTTATATTTGCAGGGGATTCTCTAAATAA GGTGCCAGGTAGCTCAAAGCAGAAGGCACAACAAAGTGGAAAAAAGGAAAATTATTCTGAGGCACCACAAGAAAATGAAA AGATAGAAAAATATGTGGATTCACAAAATAAGGAGTCAGGTAGCTCAAAGCAGAAGGCACCACAACAAAATGAGAAGAAA GAAAAATATGACCCAAAAGAAACAGCATTTTTGGCTGCGGCGAAAAATGGCATAGTTGAGATTGTGCTTGAACTTCGGAA TAATATAGAAAGTGTTGTCCATGACACTAACTCTAACAAGCAGAATGTATTGCTTGTGGCAGTGAAGAACAGGCAACCCT ATGTTGTTGTGGAACTGAGGAGAAATTTAAAGTCAAACGGTCATATTAGACAGTTTGATAGCCTAACTTTCGAAACAGAT AATGAAGACAACAATGTGCTACACATGGCAGCAGGTTCAGTGAGCAACAAGGAAAAAACTTGGCAAATAGCTGGCGCTGC CATGCAAATGATGTGGGACATAAAGTGGTATCAGTACATCAAATCGCTAGCGCCGGAGCATTTGGCGTGTAGGACCAACA AAGATGGCAAAACCCCTGGAGTAGTCTTTCAGGAGCAACACAGAGAACTCGTGAGCGAGGGTTCTGGGTGGCTCAAGGAC ACGGCGGAGTCCTGCTCTGTCGTGGCGGCGCTCATAGCAGGTGTCTCCTTCGCGACCGCGAGCACTGTCCCGGGCGGAAA CAACCAGGACTCCAGCCACCCTGACTTGAATGGCCGACCTGCATTGGAAGGAAAACCTGCATTCGACACGTTCGCCATAG CTTCCTTGGTTGGACTCTGCTTCTCAGTCACTGCACTGGTCATGTTCCTCGCCATACTCACTTCTCGGAAACAAGTTGAG GACTTCCGAAGAAGTATACCGGTGAAGCTCCTCGTGGGATTTAGCTCTCTGTTTGTGTCCATTGCTGCGATGCTTGTTGC TTTTTGTGCTGGGAATTTCTTCCTGCTCAAGGACAAGTACAAGGAAAGTATCATATTCCCTATCTATGTTGCTACTTGCT TGCCCGTGACTCTCTATGCAATTGTGCAGTTTCCACTTTATGCTGATCTTGTTAAAACTATTCTCAAGAAGGTGCCACAG CCCAGTGGCAGGGGAGTCAATTTTTAGTACTATAGACTCTTGATAGTGTGTGTGATCTCATGACTTTGGATTTTTTAGTA CCTTTAATTGAATTGTGTGTGCTGTGTTGTATGCTACCTGTGTTTAGAGTTCATAATAAGTATGTATTTCATTGTTTTCA AATAATATATTGATTTTTGTACTGCAGTGTCATAGTTTTTGTATCATCATTATCTATTGACAATTGATTCTTCAAATCAC CTTGAGACAATTTTTAGTATAGATGTGTTCTTACTTTGTTCTATTGATAGTGTGATCTCAC
CDS sequence (LotjaGi6g1v0165400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTATGATGGATATATATGTGAATAAAGAGCAAAAGAGAAAGTTCAGGGAGGCAGTAATCGAAGGCCAATGGACGCA ACAAGTGATTCCGATGTTCGAACAAAGCAATTCCTACCACAAGACCCAAATCAAAGGCAAAGGCACGGCGTTGCACGTGG CGGTGAACAACGGCAACGCCGACGTTGTGCGGAGGCTCGTGGAAGCGGTGGTGCAGCACGAAGGAGCAGCATCTGGAGGA GAAGAAGGAACCAGCGCCTTAGCAACGAGGAACGAGCAAGGGGCGAGTCCTCTGCACCTCGCTGCGCGGCGAGGGTTCGA TGAGATCTGCAAGTGCATCATCGGAGCCGGTGGCGAAAGGAGGAGTTTGATGTGTGTTAGGAATGAGAAAGGCGAGACGC CTCTCTTCTCCGCCGTGAAAACACGGCAGTTGAAAACGTTTGCCTTGCTCTATCAGTTGTTTCCCAATGATACCAATCTT GCCATTAGAAACAAGGATGATAGCATCCTTCACATTGCAATTCGAAGAGAATTTTTAGATATGGCAGTTATAATAGTGCA TTGCTATCCTGTACTTTTGGACTTGCGGAACGGTGATCAAGCCACTCCTCTTGAAATTATTGCAGCTAGGCCTTCTGCGT TCAAGAGTGGAACTTATCTCACTTGGGGGAAGCGAATTCTGTATCACTGTATATATGTAAAACCTCTGGATGCAAAGACT GCAATGAAACGGTATTTGACGTCTGAGGGCGTTGGAAAAAATCGTAACAAAGCAAGCTCCTCCATTATAGAGAAAGATAA GAGTCAAGTAGCAATACAACTAGGCCCAGTTGATACCTCCCAAGCAATATCAGAAAAAGAAGACTGTGCACGATATGCAG ATATTAATGTCCTCTGTTTTCAGTTTGCAGACATAATTCAAAAGTTAGTGTTCATATTCTGTCTTCCTTGGCTATCACTA TTGGGCATCTCAATAGCAGACTTGGTGGCAATATATAAGTTGAAGCAGAAGCACACATGGGCTAGTCAGCTGTTGAACAA ATTTATGGAAAACCCTTATCAGTCATACATGGGAATCGACGGTAATAATCCACTGCATTATACGGAAGATCATGATGAAG AAAAAGATGATGAAGAAGGGAAACTCTGGGATGTTATAAACCAAATACGTGAACAAAGGGATTCTCTAAATAAGGTGCCA GGTAGCTCAAAGCAGAAGGCACAACAAAGTGGAAAAAAGGAAAATTATTCTGAGGCACCACAAGAAAATGAAAAGATAGA AAAATATGTGGATTCACAAAATAAGGAGTCAGGTAGCTCAAAGCAGAAGGCACCACAACAAAATGAGAAGAAAGAAAAAT ATGACCCAAAAGAAACAGCATTTTTGGCTGCGGCGAAAAATGGCATAGTTGAGATTGTGCTTGAACTTCGGAATAATATA GAAAGTGTTGTCCATGACACTAACTCTAACAAGCAGAATGTATTGCTTGTGGCAGTGAAGAACAGGCAACCCTATGTTGT TGTGGAACTGAGGAGAAATTTAAAGTCAAACGGTCATATTAGACAGTTTGATAGCCTAACTTTCGAAACAGATAATGAAG ACAACAATGTGCTACACATGGCAGCAGGTTCAGTGAGCAACAAGGAAAAAACTTGGCAAATAGCTGGCGCTGCCATGCAA ATGATGTGGGACATAAAGTGGTATCAGTACATCAAATCGCTAGCGCCGGAGCATTTGGCGTGTAGGACCAACAAAGATGG CAAAACCCCTGGAGTAGTCTTTCAGGAGCAACACAGAGAACTCGTGAGCGAGGGTTCTGGGTGGCTCAAGGACACGGCGG AGTCCTGCTCTGTCGTGGCGGCGCTCATAGCAGGTGTCTCCTTCGCGACCGCGAGCACTGTCCCGGGCGGAAACAACCAG GACTCCAGCCACCCTGACTTGAATGGCCGACCTGCATTGGAAGGAAAACCTGCATTCGACACGTTCGCCATAGCTTCCTT GGTTGGACTCTGCTTCTCAGTCACTGCACTGGTCATGTTCCTCGCCATACTCACTTCTCGGAAACAAGTTGAGGACTTCC GAAGAAGTATACCGGTGAAGCTCCTCGTGGGATTTAGCTCTCTGTTTGTGTCCATTGCTGCGATGCTTGTTGCTTTTTGT GCTGGGAATTTCTTCCTGCTCAAGGACAAGTACAAGGAAAGTATCATATTCCCTATCTATGTTGCTACTTGCTTGCCCGT GACTCTCTATGCAATTGTGCAGTTTCCACTTTATGCTGATCTTGTTAAAACTATTCTCAAGAAGGTGCCACAGCCCAGTG GCAGGGGAGTCAATTTTTAG
Protein sequence (LotjaGi6g1v0165400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSMMDIYVNKEQKRKFREAVIEGQWTQQVIPMFEQSNSYHKTQIKGKGTALHVAVNNGNADVVRRLVEAVVQHEGAASGG EEGTSALATRNEQGASPLHLAARRGFDEICKCIIGAGGERRSLMCVRNEKGETPLFSAVKTRQLKTFALLYQLFPNDTNL AIRNKDDSILHIAIRREFLDMAVIIVHCYPVLLDLRNGDQATPLEIIAARPSAFKSGTYLTWGKRILYHCIYVKPLDAKT AMKRYLTSEGVGKNRNKASSSIIEKDKSQVAIQLGPVDTSQAISEKEDCARYADINVLCFQFADIIQKLVFIFCLPWLSL LGISIADLVAIYKLKQKHTWASQLLNKFMENPYQSYMGIDGNNPLHYTEDHDEEKDDEEGKLWDVINQIREQRDSLNKVP GSSKQKAQQSGKKENYSEAPQENEKIEKYVDSQNKESGSSKQKAPQQNEKKEKYDPKETAFLAAAKNGIVEIVLELRNNI ESVVHDTNSNKQNVLLVAVKNRQPYVVVELRRNLKSNGHIRQFDSLTFETDNEDNNVLHMAAGSVSNKEKTWQIAGAAMQ MMWDIKWYQYIKSLAPEHLACRTNKDGKTPGVVFQEQHRELVSEGSGWLKDTAESCSVVAALIAGVSFATASTVPGGNNQ DSSHPDLNGRPALEGKPAFDTFAIASLVGLCFSVTALVMFLAILTSRKQVEDFRRSIPVKLLVGFSSLFVSIAAMLVAFC AGNFFLLKDKYKESIIFPIYVATCLPVTLYAIVQFPLYADLVKTILKKVPQPSGRGVNF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 308 | 308 | - | – | |
| Gene3D | 2 | 220 | 219 | 5.9E-23 | ||
| PANTHER | 14 | 773 | 760 | 6.4E-146 | – | |
| PANTHER | 14 | 773 | 760 | 6.4E-146 | – | |
| SUPERFAMILY | 41 | 208 | 168 | 1.14E-17 | ||
| SMART | 46 | 75 | 30 | 50.0 | ||
| ProSiteProfiles | 46 | 165 | 120 | 14.265 | ||
| Pfam | 51 | 151 | 101 | 3.7E-9 | ||
| SMART | 93 | 122 | 30 | 0.13 | ||
| ProSiteProfiles | 93 | 119 | 27 | 9.084 | ||
| SMART | 130 | 160 | 31 | 89.0 | ||
| SMART | 165 | 194 | 30 | 590.0 | ||
| Phobius | 309 | 332 | 24 | - | – | |
| TMHMM | 309 | 331 | 23 | - | – | |
| Phobius | 333 | 661 | 329 | - | – | |
| SMART | 360 | 398 | 39 | 1700.0 | ||
| Gene3D | 393 | 603 | 211 | 6.0E-7 | ||
| MobiDBLite | 394 | 455 | 62 | - | – | |
| MobiDBLite | 394 | 416 | 23 | - | – | |
| MobiDBLite | 417 | 434 | 18 | - | – | |
| Pfam | 607 | 724 | 118 | 3.5E-29 | ||
| TMHMM | 615 | 637 | 23 | - | – | |
| Phobius | 662 | 684 | 23 | - | – | |
| TMHMM | 662 | 684 | 23 | - | – | |
| Phobius | 685 | 703 | 19 | - | – | |
| Phobius | 704 | 727 | 24 | - | – | |
| TMHMM | 704 | 726 | 23 | - | – | |
| Phobius | 728 | 738 | 11 | - | – | |
| TMHMM | 736 | 758 | 23 | - | – | |
| Phobius | 739 | 759 | 21 | - | – | |
| Phobius | 760 | 779 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0165400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…