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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0171300 |
| Transcript ID | LotjaGi6g1v0171300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Actin-related protein 2/3 complex subunit 1; TAIR: AT2G31300.1 actin-related protein C1B; Swiss-Prot: sp|Q9SJW6|ARC1B_ARATH Actin-related protein 2/3 complex subunit 1B; TrEMBL-Plants: tr|J7GP89|J7GP89_LOTJA Actin-related protein component 1; Found in the gene: LotjaGi6g1v0171300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:45800341..45810675) extracted from Lotus japonicus Gifu genome v1.2.
ATTACTGAAATTCACCATCATCTCCCTGACACGCCAAGCAAAGTGTTTCTTTTTGCCTCAGTCTCGTTTCAACAGATCTC ACTCTGTTCGGCGGAGCAGAGCAGAGAGAACATGGCGGTGATGGCGGTTCATCAGTTCGCACAATGCATCACTTGCCACG CATGGAGCCCCGATCAATCCAGTAATATTCATTCCACCACTCTCCTTGTTTTTCTTCTGTTTACTTTTCCTTGTTTGGCT TCCGAGAAAATGCTACTTTTCGAGTTTTCATGGATGGCGATTTAGAGAAAATGGATCACGCTTTTTGATTTTTCTTCTTA GAGTTTTAGGAATTGTTTGATTTTTTTCGTTTTCTTCATTTCATTGACCATTTTTGGAGTTCTATATGCAATTATGATTG GATCTGATAAATCAAATCGTTTGTTTGTAGAAAAGGAAAGATGTATCACTCGTTTGATCATTTTGTTAATCAGTTTGAGT AAATTTGTTTCCATTTTGAGCTTGATTTGAATGTATTTGTTGTGCTGTTGAATTTTAGACGAACTAGTTTGCTTTGTAAT TTTAGGGGAGTGTTGAGTTTAAGGCGGAAAACAGTAGAAATGGTTAGCTTATTGTTCATGGGAATCCAGTATGTCTTGAA GAATTTGAGTGAGAGGAAGGTACTAGAAGTTCTGGACATTTAGCATTGTATAGGCTAATAATGTGTGGTTTGCGCGCATT GCGATGTATGGTAAGGGGAGAAATTGAGAGGTTTAAGTAATAAGTTTGAAGTTTCGTTCTGCTTGTTTTGTATGTTTGAA ATCTTCCTAATTGGGTTGGCTTAAAAATGTTCATATTAAATGGGGTAGTTTTCGGTAATCATCTTTTTTCGTCTCTGAAT TTGGATTCTCTCCGGCCATCTTATTTCCATCCTCACTCCATCCGAGGTTTGAGCGAGTGATTTTGTGTCTATCGGTCTAA AAAAGCTCGTAGTCCAAGCTCTACTTGGTGGTCTGAGCTCATAGTTTGAGCTCTGAGCTTTTTAAAACCCTTAGATATAA AATCAATAGCTCATATCTTGAATGGAGAGAAGTTGGATGGAGATGTTCCAAATGTTTTCCTCTCCTTATTTTATGAAATT CCCAAACAAGAGGAGACTTATCCTTCCTATCAACTGGTATCTCCTCCATCCAAACGTATCCAGCTCATGTAATTAGCTGA GGAAGAGAAAAGGCCTACAATAATGATGTTGCTTTAATTTAATTGTTATTTGTCTCAAATACTTTTCCTAACACAACATG TTTTCCCATTGGAAAAGAGTGACAGATAGTTATTGAAAATTTGCCTAAATATTGCACCTAGGTGGAACTTCTTGTCATGC ATATTGACCTTAGGTATCCATTTTTTGTTTCTGGACTAAATTAATGTGCAATCAATATATGTTAGAAGTTTCATCGCAAT TAGGAAAATAATAGTTTGATTGTTTTCTGATAGTAGTTGGGCATTGGTCACGTGTTAAACTGTTAATATTAGGTCATCTA TAAAAGTTGCTTTTTCGTGACCAAATTAAGGACTCTTCCCCACCAGTCCACCACATAATTGTTGAATATTTCATGTAATA CTAATAGTGGAAATAATTGAGATGTTTCAGTTTTTTTTTCTTTCTAATAATACATTTTTGTTTCATTAGATAAAAAAAAA GATATGCTAACATTTGAGCATTTTTATATATCACAATAAGTTCAAAAATACAGTTTATAGGTCTTACTATAACAAAACCA TTTATTGGTTGTCCATATGATTGCAGCTTTTATGACTTCTTAACATATAGTATATTTATCTCCTTTTGTAGTGGTCGCAT TATGTCCAAACAATAATGAAGTGCACATATATAGATTAGTGGAAGACAAATGGGAAAAGGTGCATGTTCTTCAAAAGGTA TTATCCTAGCATTTTTTCTCTTTTATCGATTTAAATAGATATTTATTCTATATTCTTTTATATCTTCTGGATGCAAGCAC AATTATAAAGATTTAAAACTGATATTTTTGGTGCTTACGAGTTGATCACTCATGTGAGAAGTTCTTGGACATGTAAGAAG AATGAAAGCAAGTGTTTCTGCAATAAGTTGAATTCTATTTTCAATGTATCTGATACTGTTCTATGAACTAATTTCTGAGT CTTGTAGCAGTCAATTTTGGCCATGAATTCATGTGGTGCTCAATCACTAATGGTGTAAAGGGAAAGATTAGTTAATTATG CACCCAGTCATGTTTGCTTGTCTTGGGTATGTTTAATTGTTAGCTTTTGCAATGCCGATCCCTCCTAGGATTATCTGAAG AATTTAGAAACTTGTGAGAGATTTGCCTGTCCTTTATTATTTGTTATCTTTTGACAACACAATTTCACTGTTCAAAATTT GTTGTGTTCTCACTTTCTAGAATCCACTTTTCCTAGATTTTCTGTTTTGTTGGAACCTGAAGGTCAGAGAGACTTAAATT GCAACCTTTACTCGCTACTTAACTTTGATATGTTGTTGAATAGCTTTCTATGCAGTTTTGTACTGAATTTGTCATCTAAC AAAAGAGTTTTTGTCATCCTGAATTGTCTTTCAAATTAAATCGAACTTGGGTGTCTCTTTAGTTTTATGTATGTAATCTC TAGCGCCGAACAATTAAGTCATAGCTCATGAGCCTCATGGCTAAGGTTGGACTAATCTGATGTTGTCTCATTTTATAGCA TCTACACATATTTCTATTTCTATAGTTTATTTATGCCTGACATGTTGAACAAACTTTCAATTTGCTTGTCTTTAGTCAAT ATCGTTTTCGTAAAGAAATGACAAGGAGAATTTATAGTACATGTCTTATCAATATGTAATGACATGCCAATCAACGTTGA CAAAATCATGATCTTACCTAGAATAGGAAAGGTGCAATACATGTAAGTTGTGTAATCATAACTTGGATTGTAAAATCCTA CATAAAATACAAAAATTGTTTTCAATTATTAAAACATACACATATGCACATAGGATTTATTGGAGTAATGTTCTATATAT TGACATTGTTGCCTTCGTGCATTGCGGCCGCATTCCTATATTACTATATATGTATCATTGTACTGAGCTACCCAACGTGT CATGACAGCTCTCAGTTAGTTAAGGAGTTGGGTTTGATTAATAGGACTTCTATTATCAGTTGTAACAGAAACAGTTGGGC TTGGAATCCTATAAAATATAAACACTGCTGTGATTTGTATTGATTATCAGAATTAAAAACAAAATACATTTTCAGATTTT ACTCAATTCCATCTCAGATTTTTTGCTTTCTTTTTTAATGCATTTTTGTTTTTGAAGGAACAAATTATTTTGTTGGAGAC TTTGTGAATAGTTTCTAAGCAATTTCTTGGTTTTATTTTTCACAGCATGACCAGGTAGTTTCTGGGATAGATTGGAGTAC GAGATCAAATAGAATAGTCACTGCATCACATGATCGAAATTCGTGAGTGCCTGTCTGGTTTAGAACATCAAAGTTATTAC CCTTGGTTTTGGTGATTTTTTAGCATTGCTAGTTTCTCCTTTATACATACATATTGATAACAAGTTAAAGTAGAAGCAAT CTGCTCTTTTTGTAGATATGTCTGGAATCTTGAAGGATCAGAGTGGGTACCCACTCTTGTTATCCTTAGGCTAAACCGTG CTGCTCTTTGTGTTCAGTGGAGTCCAAAAGGTATGAAGCACATTGACATGTCCTAGTTCCTCTCTTTTCTTGTGTGAAGT TCTTCTCTTCTCTTCTTATGTAATGATATGCTTATGAAGTCATGAAACTTTATGGTGTTGACGTGTTGTAATATTATATG TTATCATTTCTTTACTGGTTCAAGTCTTCTGAGTCTTGTTTGTAATGTTATTATTGGAGGTTTAATTTTTTTACCCTTCC CTAGCCAGACGCTTGCTCTTCCTATATGACATTTTTTCATTTGTATAAATATTGCCTGCTAATGATTCTATGAAATAATT ATTTATATCTATGTTTTAATGCATTTTCTAATTGTGTTTTGATAGAAAACAAATTCGCGGTGGGAAGTGGAGCCAAAACT GTTTGTATATGCTATTATGAGCAGGAGAACAACTGGTCTGTCAGCGTTCCTTGCACTTTATTTTCTATGTTTATTTGCAT CCTGGCAATATGTTGGTTATGCATAGTTTTTTTCCCATTTTTTTTGTGTTTTCACTTCGGATGCACTTTAGATTTGCTTA GACCATAGTTTTGAGTCTTGACTGTATGAAGGCACCTAGTGCCACAATGCAATATAATCTTTTTTTATTGGAACAGCTGG TTCATATCTTTATCTCTCTGAAAAAAAGTAAATTGAGACTGAGTGTCTAGAATTCAACATGGAGGACCTTTTCCTGCAAA ATAAAAAATGAATGTTTTATAAGATATAGGGAATATCAAAATATAACTTTTGTGTTCAACATGGCTATTTCTTATCAAAA GTAAGTGAGACTGCGACTGAATAAAATAGAGATGAGAAATTGATGCAGCATCTGATGGACCATTCACCATTGTAATCAGA AACTGATGGTTCATTTAGATGACAAGTTCTGTGCAAAATTAACAATGAAGTCAATGATTACAGCAACCCATATACTGTCT GTGATGATACTAATTTCAATTAGCTTACATGATCAATTGTTTATTGCTTTTGAGACTTGTTATGATACATTAGTTCATTT GACATTCATGTTTATTTTAGACTTGCCATGGGCCACTTCAGTCTTTAGTTTGTTTAAGACTTATGTAAGTTTGTTTAAGA CTTGATATATCACTTTTTAGTTCATCTGAAAATTGAGTGCTATGATGATTATAGTCAAGACTTCTTATATTTAATGAATT TTCCATTTCTTATCTCACCATTATATTTGTATGTGAAACTTCCCTCCACTTATGACAGACCTACAGATTCACCCGAACTC AACCCATTCATTATTTGGTTGGGTTGTATTAGGTTAAGGCGGAATCTCATGGCGGGCTTTTGGCAATCCGCCATAGTCTG CCATCTGCCATTAACAACATTTTTTGAAAGAAAACATATTTCCTTAACTCTGCCCCCTCCAATCCACTGCTTTATGAGCT GTTTGGATCGTAAAGTGACCCTAAACTCAATCCAATCCATAGACCCCGTCCCCTAGTTGATATAGTTGGAACATAAGTTT AAAATTTCAACACACTGCATTGCTTTTTTTTAATTGTTAATTTTATATAGTTGTATCTCTTATGCAGGTGGGTCAGCAAA CTTATAAGGAAAAGACATGACTCTTCAGTGACAAGTGTTTCATGGCATCCCAATAATGTTAGCATTCTATATATTGAGTG TTTTTTGTTATGTGATCATAGTTAGCAAAAGCCTATTTTTATACTATAGGTTAGCTCGTAGGATGCACTTGCTTGGCATG TTGTAAGATTCACCATAATGATTGATAAATTTTGTTTATGGCTAGAAAACAACGAAAGTTTCTTTGCTTGTGGATTTTCA TTATATATATACATATATATATATATATATTATCTCGACATTTCTAATATATAATTCTTGTTTTTCCTCTGTTTATTTTC TAAATATTCTTTTTGTATATTATTTCAGTTAGATCATGTTTGGTCTGTTAAATAATTTTAGCTTCACGATCAAGTAAATA AGATTATTAGAGAGAAATTTGGAGTAGCTCCCATTGTAGAAAAGATGGTAGAGTCTGACTATCTGTGGTTTGGCATGTAA TGAGAAGACCCATAAAAACACTAGTTTGGAGGGCTGCCCAGATTGAGGGCGACCATTGCTTGATTTAGAGAGAGACAAAG GAATATTGTAGGCCAAATCATTAAGAGAAATTTATTGATAAACCTTTAATTTTTAAAATTTAATGCATGGCATAGCTTTA TTATGGCATCGTCACATGATCTGTCATCCATGTAACCGACCCCATCTAGTGAGAAAAAACTTGGCTTTTGTTGTTGATCA AATGTTAGATAAATGCTCTTAAAAATATATTTGTCGGTTTGTCCTATATGATGTAAATACACTTGATGCACAACATATGT TTTTCTTTTCTTTATCAATTGCAGATTCTTCTTGCAACAACATCCACGGATGGGAAATGCCGAGTATTTTCCACCTTTAT AAAAGGCGTAGATGCAAAGTATGATGAAGCAACTCTAAATATGGTTGACTTTTTCTGTTTATGTTTTATGATTATGTTAT ATAATTCACGTTTGCATGTTGAATGGGCACAGGGATTCAATAAAGGGTACTTTATCAGATTCAAAATTTGGAGAGGTTAA TTTTTAACTCTAATTCCTCATGTAAATTCTTGATATTGTTTCTATGCTTGAGGACATATTTTTCAAGGTACACCCATTTG TTGACACTTTGTAGACAATAATAAAGGCTGATACGAACAAATTACTCTTTCAAGCCTTGATGCTCTCTGTCTCTCTTTCC TCCCCAAATATCTCTTCTTTGTTTTTTATGAGATTGTCAGAGGGAACTGTGGCCAGTGGTATTGAAATGTTGGTTTCCTT CCATATGAAATATCATGGTACAGACTGATGGCCAATATGCCAACAAATAGGAAGCAAACAATAATATTATGAACTTAATA AATAATTTCGATTTACGGTCGATCTTTACCAAATTTTTATACATGTACTAAAACATCGCTTATGGAGTAATTTATGTATC CTATAGATGATATTATTCACCTGTTGTTTATCAGGAAGTTGAAATTGAGTTGAAACTGACATTAAAAAGATGTCTTCTTT TACTGTGTTTGGTTCAATGGAGGGGATGGAGTGATTTTAGTGGAGGGGAGGGGTGGGAAGAGATTTAATTCTTATCATAT TTGGTTAAGAGGATGGATTGGGTCAGGAAGGAGAGGGCAAATGACGCCTTTTGTATTTGATTGATGAGGGGAGGGGAAGG ATTTGAAAACCAGTTTACTTTAATTGCCCTAACTTTTAAAATACAGATTGAAGTTTTAAAACATGAGAAGGGGTATTTTT GTCAAATGAAATATTTCCCCTCCAATTCCCCACTTTTGGAGGGGAGACAAAATTGAGATGAGGGGTTTTGACCCCCTCCC CTCCCCTCCTAAAATTTGAACCAAACATGATAAGTTTAAAAAATCCCTCTGCTCCCCTCCATTCACCTCCAACCAAACAT AAATGTTGTCGAGATCTATATATTTTGTGGTTACTGCATTGAGTATCTTTTAGTATATTGACCAACGACTGAATGCTTCT GAAAGATTTGGTTTGTATAAGATTATAGTTACAAACTGAACAAAGGTTTTTTATTAGTTTTCTTATTAACAATTTTTCTT CCATCTCCTAAAAAAAGGAAAATAGAGAAAGGTAATGGAAAGACCTGTTGGTTCTCTCTAGCTTCTGCTTATAGTATTTT TCTTGGTTAACAGTTAATTGTTCAGCTTGATCTCTCATCATCTTGGACATTCGGAGTCAAGTGGTCACCAAGTGGCAATA CTCTAGCTTATGTAGGTGAGAAAATTCTCTCCTCTGGCTGATCTTATACTTGTGTAGCCGAAACTAATGCTGCCAGCTAT ATGCTTCTTTTTGTCTGATTTCATTTTTCTTCTGTCTAAAGTCAGAATTCAAGATTTCTTAGTGTGAACTTCCACTGAGG TTCAGTTATTAAAAGAATATTAGAAAAAATGTATTGGTACTGATAGATATTCGTGGTGCGCGGAGATGTTATTAATTTAT CTTAACCCATTTGTTTTTTTATTTGAAAGAAACATATTGGGGTCAAATTTCGATAAAAATCATGGGTGCTTCTGAAACAT TGGATTCTATTATGCCAATTTATTTTTTTACTTTTGACCAACTGTATTTATTTTATACAGGTCATAATTCTATGATTTAT TTTGTTGATGATGTTGGTCCTTCTCCTCTGGCACAAAATGTCGTGTTCCGTGATTTGCCTCTCCGTGATGTGGGTCAGCA TCCATTCTTTCTAACCATTTTTAGTTTCTCCTGGTCTTCTTTGTTGACGATTTACTGATTTTGCTGGAATTGGTGGGTCA TTGTATCAATTCTTTTCAGGTACTATTTGTTTCTGAGAGAACTGTTATAGGTGTGGGATTCGACTGTAACCCAATGGTTT TTGCTGCTGATGAAAGAGGAATTTGGTATGTGAAAATTCAGATTTGGGTTTCTATGATAGGGCGTAATCAATGTCACTGG GCCAACTTGCATGCAATCTTTCTACTAGAAACAAACAAATAGACATTAATCACATCACCATGGCTTTTCATCTCAAATTG ATGTTGCTTTGAATTCTCTTTCCAGGTGGAAAAGAAATGCTTACTTTGGTTCCTTATTTATTTTTCCTTTTTGATTTTTT TCTCTCTAGGAGTTTTATCAGATATCTTGGGGAACGAAAAACAGCATCTTCTCCATCAAGATATGGTTCACAGGTAACTA CATTTCTAAAAAAAGATTCTTCAATATACAGCTTTGGGAAACTTGAATCTCCAGTTGGAAATCAAATTTATTATTCTTAA CAAATATCTAATGTGAGATAACTAATAAAGTTTTGGTACGAGACTAACTTGATAGAGATAATTTCTGATCCTTCGAAGTT CGGATACAAGTTTAAACTTCAATAAGAAAGAATTAAATGAAATATTGGGGGAGAAGTTGTCAGCGCTATGGGGCCATCGT TTCCATTTGGATGCCTACTGAGGAGGCTCCAGCTATAACATTTAGCTGAATCCCACAATTTTTTTAAAGACACCCTTTTA AGGGAGGGAATGGATCTGTTTATGTTGTTAACTTGCTCTCTTGCTCCCTTTTTATCAAATTCAGTTTTACAATTAGTTTT GTGAAGCATTTGGGAAGTTCTATGACCAATCCAAGCATGGGAAAGTAAAACTAGCAGAGGATATGATGCCCTCTAAATCA AGCTTAGTTGATTTGCATAAGGGTCACTATTTGTAGCTATTTCTGTTAATGCTGCTAACTTGCTCTCTTTCTCTCAATTC TGTTTTTCAATCAGTTTTCTGAAGCATTTGGGAAGTTCTATGGCCAATCCAAGCATGGAGTGAGCAATGATACAGTTGAT ACTTCAAGAACACGTGGAGCTGTTCATGAAAACTGTATAAAGTAAATATCTCCCTCATTATCTCCATACTTTCCATTAGT AAAATGCTCTTTTAATTTTTTCAATCTTGCGATGTAAGAATTTGTCTGATATCGAGTTCGGATCGACTTATATGTTCATA TAAACTGTTAATGACTGGTGCCTTTTCTGGGTTTGTAGTTCTATCATTCCTCTTGGGGAGCATGGGGCATTGACAAGGCG TTTCAGCACATCAGGTTAGTCAATGGTGGACGGTAATCTGAAATTTTGCTATTCTTTGTGCTCATAATTTTGTTATTTTT TGTGCTTTGGCTAATGACCACTCCTTGAAATGAAACTACAGGATTGGATGGAAGAATTGTTTTATGGGATTTGGAAAATG AGCAAGACATATTGGAATTATAAGCTCATGAGTAGATTGTCTACTCTTCGTGGTAAAGTCTCTGAAGGTGATTGTGGCAT GCAGCATATTATACCTTGTAGATTAATTTGGTTTTGGTTGTGAGAATCATTGTGAACAAGGGCTGAAAGTGTCTGATATT AGCCCCTAGAATATGTTTATAAAATATGCCTGTATGATAATAACGCATTTTCCTTTTATATATTTTGTCTGTTCTGTTCC CCGCAATGTTTTTTTTATAACTTTCCCCGCAATGTTTCTTGTGCTTGAATATCACATTATAAATGAGTTTTCACAAAGTT ATGTACTTGTAAAAGTCTTTCAAAAAAAAAGAGAACTTGTAAAAGTTTCAAAAAAAAAGAACTTGTACACGTTTTTCAAT TTTTTTAATTGTAAATCCAATAACTGAGCAAAAAAATATAGGTTTAAAAATTAAGACAAAAACTTGTCTGTTAATATATT TCTAACCCAAATCAAAGAAAGTGAAATCACAGAGGGATGAGAAAAATGTACCTTAATTTTGTTTAGAATTATTTTGTTCC AAGCAAAAGGAAATGCGATGTTTAGGGTTTAGGGGTAAGTTGAAAATTTCTTTGTGAGGCGTATTTGGTTTTGGTTGGGG GTTGGAGCTCACCATGCTTTATTCTCTTTCACTTATGCGTCGGATTGGGTGCGTAACCTAGCTGTGATCTGGAACCTTTA GTGTGTGAGAAACATCTTTTGCTTCGAGCATAAGCTTGTGCCAGATGAAGCTCTGTTTTCAAACATCCATGATCATAGGA GTATTTTCTAGTGTG
CDS sequence (LotjaGi6g1v0171300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGTGATGGCGGTTCATCAGTTCGCACAATGCATCACTTGCCACGCATGGAGCCCCGATCAATCCATGGTCGCATT ATGTCCAAACAATAATGAAGTGCACATATATAGATTAGTGGAAGACAAATGGGAAAAGGTGCATGTTCTTCAAAAGCATG ACCAGGTAGTTTCTGGGATAGATTGGAGTACGAGATCAAATAGAATAGTCACTGCATCACATGATCGAAATTCATATGTC TGGAATCTTGAAGGATCAGAGTGGGTACCCACTCTTGTTATCCTTAGGCTAAACCGTGCTGCTCTTTGTGTTCAGTGGAG TCCAAAAGAAAACAAATTCGCGGTGGGAAGTGGAGCCAAAACTGTTTGTATATGCTATTATGAGCAGGAGAACAACTGGT GGGTCAGCAAACTTATAAGGAAAAGACATGACTCTTCAGTGACAAGTGTTTCATGGCATCCCAATAATATTCTTCTTGCA ACAACATCCACGGATGGGAAATGCCGAGTATTTTCCACCTTTATAAAAGGCGTAGATGCAAAGGATTCAATAAAGGGTAC TTTATCAGATTCAAAATTTGGAGAGTTAATTGTTCAGCTTGATCTCTCATCATCTTGGACATTCGGAGTCAAGTGGTCAC CAAGTGGCAATACTCTAGCTTATGTAGGTCATAATTCTATGATTTATTTTGTTGATGATGTTGGTCCTTCTCCTCTGGCA CAAAATGTCGTGTTCCGTGATTTGCCTCTCCGTGATGTACTATTTGTTTCTGAGAGAACTGTTATAGGTGTGGGATTCGA CTGTAACCCAATGGTTTTTGCTGCTGATGAAAGAGGAATTTGGAGTTTTATCAGATATCTTGGGGAACGAAAAACAGCAT CTTCTCCATCAAGATATGGTTCACAGTTTTCTGAAGCATTTGGGAAGTTCTATGGCCAATCCAAGCATGGAGTGAGCAAT GATACAGTTGATACTTCAAGAACACGTGGAGCTGTTCATGAAAACTGTATAAATTCTATCATTCCTCTTGGGGAGCATGG GGCATTGACAAGGCGTTTCAGCACATCAGGATTGGATGGAAGAATTGTTTTATGGGATTTGGAAAATGAGCAAGACATAT TGGAATTATAA
Protein sequence (LotjaGi6g1v0171300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVMAVHQFAQCITCHAWSPDQSMVALCPNNNEVHIYRLVEDKWEKVHVLQKHDQVVSGIDWSTRSNRIVTASHDRNSYV WNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHDSSVTSVSWHPNNILLA TTSTDGKCRVFSTFIKGVDAKDSIKGTLSDSKFGELIVQLDLSSSWTFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA QNVVFRDLPLRDVLFVSERTVIGVGFDCNPMVFAADERGIWSFIRYLGERKTASSPSRYGSQFSEAFGKFYGQSKHGVSN DTVDTSRTRGAVHENCINSIIPLGEHGALTRRFSTSGLDGRIVLWDLENEQDILEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 367 | 367 | 5.9E-169 | – | |
| PIRSF | 1 | 372 | 372 | 2.9E-148 | ||
| PANTHER | 1 | 367 | 367 | 5.9E-169 | ||
| Gene3D | 4 | 376 | 373 | 2.5E-135 | ||
| ProSiteProfiles | 6 | 181 | 176 | 13.949 | ||
| SUPERFAMILY | 11 | 373 | 363 | 2.29E-50 | ||
| Pfam | 17 | 106 | 90 | 2.1E-5 | ||
| SMART | 43 | 82 | 40 | 2.0E-5 | ||
| ProSiteProfiles | 50 | 91 | 42 | 12.113 | ||
| ProSitePatterns | 69 | 83 | 15 | - | ||
| SMART | 87 | 126 | 40 | 7.9 | ||
| SMART | 132 | 172 | 41 | 6.5E-5 | ||
| ProSiteProfiles | 140 | 172 | 33 | 9.84 | ||
| Pfam | 142 | 171 | 30 | 6.2E-5 | ||
| SMART | 193 | 232 | 40 | 3.3 | ||
| SMART | 319 | 366 | 48 | 95.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Arp2/3 protein complex | A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments. | ||
| Cellular component | Actin cytoskeleton | The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes. | ||
| Biological process | Regulation of actin filament polymerization | Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament. | ||
| Biological process | Arp2/3 complex-mediated actin nucleation | The actin nucleation process in which actin monomers combine to form a new branch on the side of an existing actin filament; mediated by the Arp2/3 protein complex and its interaction with other proteins. |
Expression pattern of LotjaGi6g1v0171300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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