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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0195200 |
| Transcript ID | LotjaGi6g1v0195200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lipoxygenase; TAIR: AT3G45140.1 lipoxygenase 2; Swiss-Prot: sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic; TrEMBL-Plants: tr|A0A072VA97|A0A072VA97_MEDTR Linoleate 13S-lipoxygenase 2-1, related protein; Found in the gene: LotjaGi6g1v0195200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:49165524..49170618) extracted from Lotus japonicus Gifu genome v1.2.
CTATCTTGAAGAAGTGTAAAATTAAACTCTTTTTACAAAGTAGTTGGAGAGAGAAAAAGGTTCACATTATATTGGGTGTG TAACACCATGATGGCAGCAACAATCAGAGCCAACACCAAAACTCAGACTTTAAAAGCTTTTGTGAGTGTGAAGGAAACTA GTGGTGGACTTCTAACGAATCTTGTTAGTGGCATTGTTGGGAAAACACTTGTTTTGGAGCTAGTGAGCGAGGAGCTTGAT CTAAGTATATAAGTTTAATTTCTTTGTTTTTGTTATTCTTGACCATTGTAGTTCTGAACACAAATTACCTACATATATGC TCTTTTCCACTATTAGAGGGGCACTTCGACCCTCTGAGCAACCTGCTACGTGAAACGAACAAGACAATCCAGTTCGATTC ACATAACCGCCCAACTTAACTCATGATCCCCTCATGAGCCAATTTATCTTCTTTTTTTAAATTTAACTAATTTGTAGAGA GTTTTGGTGGGGCGTCAACTCGTAGTCAAAGATTCAACTCGCAAACCCGTAAAAAAAAGATTTTACTTTTTATTTTTTTT TGTTTATTAATGGATCAACAGGTCACTAATTAATTATCGGAGAGTTGACTTTACCAAAACAACTCAACCCAACACAACCC ATTCTAAATAGGTCGAAAGCTAGACAATGGATCGACCCACATTGCCACTCCCGGCTATAATAGACTCCTTTAATTAAAAT ATTGCACCTCATAAAAGTTTTTTTTCTTCTGGCTGTAAACTTAATCTTACTATATGTTTCTACTTTCTTTATTTTTTTAA TGAAATATTATGTTTTTATCAAGAGGATAAAAAAAGGAAAGAGAAAAAAGAAAAGTATTAATAGAGATATTTTCCGAACA TCTTTTAGACTTGCGATTTTGTTGAGATTTTTAAAAATCACAATGTGTTATAGAGTTAAAAACCGTCAGTAAATAGTATA TCTAAAGAGTATCTGACAAAATGTCTTTTGTATCATCCGAGAAAAAGACTATTCACGTGTAAACAATTAGTTAGTCTAGA TAATGTAATATATTTATTTTGGTCTTTTATCTTTAATTTCTCTTACCCTTTGTTAAATTTCTATAAATGAAGAATCCAAC TCAGAGAGAAAGACAAGAAAAGCCAATGCACACAAGACACAAGAAAAAGAGAACGAGGTGCAGTACGAGGCTACATTTCA ATTACCAGCAGACTTCGGAAATGTTGGTGCTGTCTTGGTTGAGAATGAGTACCTCAGTGAAGTGTTTCTAAGAAGCATTG TCCTTGAAGGCTTCCCTGATGGGCCTGTGCACCTTACTTGTGAATCTTGGGTCCAGCCCAAACACGATAGTCCCACAAAG AGAGTCTTCTTCACTAACAAGGTCAGAATCATGCATAAAATCAAATGTGATATCCTTATTTGTTGTCTCTTACATCAACA ATTTTTGTATTTTTTATCATAATAATTTGTAATACGATGGACACACATTTCTTATTTTTTTAGTGACATTCAATGGACAT ATATTTAGTGGCGGCCACTGGCCGCCCATAAACCGTACGTCTCAATTGAATCAACTGAATATCTGCGAAGAAAACGAATG TACATGAATGATCAATTTTTATAATATTTCACATTGGTTTTCTTTTGATTTATAGTCTTATTTGCCAACACAAACACCAA CTGGATTGAGAAGGTTGAGAGAAGAGGAGCTAGTGCTGCTAAGAGGGAATGGAGAAGGAGTGCGCAAAAATTCAGACAGA ATATATGATTATGATGTGTACAACGACCTTGGAGATCCTGATACTGAAATTGAACTCAAAAGACATGTTCTTGGTGGCTC CAAACAATTTCCATATCCAAGACGGTGTCGTACTGGTCGAAAACACTCGGATGCAGGTCATATATATGCCGAATATGAGT TTCCGACATGCATTTTTCAGTGAATAGCCACACATTTAGAGGCAGTTGTAAACTACCGCCGACATTTAAGGCAGTGCACT TAAAAGCTCCTGCAGTCCTGCTGAAGTGTGTGGACTGATCATGCAATTTATATTGTAATATACTAATATGCTTGTTATTT TTGTTATTATATAGATCCATCGAGTGAAACAAGAAGTTCAAGTTTCTATGTTCCTCGTGATGAGTCATTTGCCGAGATAA AGCAGACACAATTCGACAAAACCACATTATCCTCAGGAGTAAGTGCAGTTTTAGAATCCTTTGATGCAATTCTCACGGAC ACAAATCTTGGATTTGAAAGCTTCGAAGACATAGACACCCTTTTCAAAGAAGGGTTTCATCTGCCTCCTCTTAAAGGGAA TGGGTTAAATTTGCTTCAAAGAGTCGTTCCTCACTTAATCAAAGCTGCTAATGATAGTCAAAACCTTTTGCGCTTTGATA CACCAGAAGCAGTTCAAAGTAAGCACATTCATAATTAAATATGATTAAGTTTATATACTGCATTACTTGCTTTATAACTT ATTTGAGTCTAATAACCACAAGCTCTGATGTGATGGTTGTTCATATGGTCCCTAAATCATGAGGTCGGGTGTTTAATCCT CGCCAAATGAAACTCATTTTATGGTAAACTATGTACTGCTTTGTGTGAATTCGTGCGAGAGGATTAGTGATTGTTGTCAG CGGTGATACCTAGGTTTCAAAAAAAAATATTTTAGTCTAATATGCTTAACTATGGATATCTATAGATACCCCCAAATGCA ATTTTTTTCCATCACTAAATGATTGAGTTTTGAAATTGTAGGAGACAAATTCTTTTGGTTATCAGATGAGGAATTTGCAA GGGAGACTTTGGCTGGTGTTAACCCATATAGCATCCAATTAGTCAAGGCAAGAGTTTTATGAATATTTGGTTCATTAATT ACTTCCATTTTATCATCTATGCTCAAGACTTTTAAAATGTTTCCTCTCTCTATATTCATTATATAGGAATGGCCTTTGAG AAGTAAACTAGACCCCCATATCTATGGTCCACAAGAATCTGTCATTACTTATGAAGTCATTGAATCACAAATAATTGGTT ATTCCACAGTCGAAGAGGTACCAAACATTATATAATGACTTAATTGAATAATAATCTATGATGATTAACAATTGTTAAAT CTAAACTGCAGGCTATCAAAGAGAAGAAATTGTTCATGCTAGACTACCATGACTTATTCTTACCATATGTAAGCAAAGTG AGAAAGATTCAGGGAACCACACTCTATGGATCACGAACATTGTTCTTTCTCACCAAAGAAAGCACATTGAAGCCACTAGC TATTGAGCTCACTAGACCAGCCCTGGATGGTAAGCCACAGTGGAAACAAGTCTTCACACCTGCTCCTCATTCCACAGGTC TTTGGCTTTGGAGGCTTGCCAAGACTCATGTTCTTGCCCATGATTCTGGTTATCATGAACTTATAAGCCATTGGTTAGTA CAATCATACTATTCTCTTTTGTCATGTATTAGATTCAGATTCCGTGTGTGAGAAAAATCCTAAATTTCTGCATTCTAATA ATCTGAGTCGTTCAATTACAATTGGACGATTCATATGTTTCATAAAGATCGGACAACTCCGCGAAGCTTGATATTTGAGT CGTTTGATCATGATGGAATGACTCAGCTTATGTGATTTCGGGAAATCCAAATTACATGCATTTAAGAAATAATTAAGTAT TCTACCAATCACTTGGTATATATGAGAAGTTTAGTGAGTCTTAATTAGTGGTACTAATTATTTACATTTAAATCATCAAT TTGTGCAGGTTAAGGACTCATTGTGTTATAGAACCCTTTGTCATTGCAACAAATAGACAACTTAGCATCATGCACCCTAT CTACAAGTTATTGCATCCGCATTTGAGATATACTATGGAGATCAACTCCCTTGCCCGCGAAGTGCTTATTAATGCAAATG GGATCATTGAAACCTCATTCTTTACTAGAAAATATTCAATGGAATTAAGCTCTTTGGCATATGATCAACTTTGGCAATTT GATTTGCAATCACTTCCTAATGATCTTATTCACAGGTAAAGTTTGCAAAGGTGCATGCCTTTAGGCTTTTTTTTTTTGTT TCCTTCTTTTTTTAAACATGTTAAAAATTTACTTGATGGAGTAATTTAACTTTTTCATTCAGAGGAATGGCTATTGAAGA TCCTAATGCTCCTCATGGCCTAAAGCTAACAGTTGAAGACTACCCTTTTGCCAATGATGGTCTCCTTCTATGGGATGCCA TTAAACAATGGGTCACAGACTATGTAAACCATTATTATCCAAGCTTTGATGTCATAGAATCCGACCACGAGCTCCAATCA TGGTGGACAGAAATTCGAACTGTCGGTCACGGAGACAAATACGAAGAACCGTGGTGGCCAAATCTTAAAACACCAAAAGA CCTTATTGACATCGTCACCACGGTAGCTTGGGTAGCCTCTGCTCATCATGCAGCTACAAACTTTGCCCAATATGCTTATG GAGGCTATTTCCCTAATCGACCCACAATTGCTAGGAACAAAATGCCTACAGAAGACCCTACTAAGGAAGAGTGGGAGAAG TTTTTAAATAAGCCTGAACAAACCCTTTTGGAGTGTTTCCCATCACAGATCCAAGCAACTTTAGTGATGGTCATCTTGAA CTTGTTATCATATCATTCACCAGATGAAGAGTACCTGGGGCAATACATGGAACCATCATGGGCTGTGAATCCAACTATAA AGGAAGCCTTTGAAAGGTTTAGTGGGAGATTGAAGGAGATTGAAGGTATTATAGACTCAAGGAATGCAGATAGTAATTTG AAGAATAGACATGGAGCTGGAGTGATTCCTTATGAGCTAATGAAACCACTTTCAAAGCCTGGAGTCACTGGAAAAGGAGT TCCATATAGCATAACCATTTAAAGATTGGTTTCATTGATTAGAATGGGTTGATTAAAAAATTCTTCCAAGGGTGACATGT TGATCAGCAAGGTCTTAATATAAAGTTATATTCATATAATTTTTTTATGATCATGTATTGTATAGTACTACAAGGGTTCT TGTATCAATTTGTTTATCATTTAACAAGGAATAAACATATAATTTATTTTGAAAA
CDS sequence (LotjaGi6g1v0195200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGGCAGCAACAATCAGAGCCAACACCAAAACTCAGACTTTAAAAGCTTTTGTGAGTGTGAAGGAAACTAGTGGTGG ACTTCTAACGAATCTTGTTAGTGGCATTGTTGGGAAAACACTTGTTTTGGAGCTAGTGAGCGAGGAGCTTGATCTAAAAT CCAACTCAGAGAGAAAGACAAGAAAAGCCAATGCACACAAGACACAAGAAAAAGAGAACGAGGTGCAGTACGAGGCTACA TTTCAATTACCAGCAGACTTCGGAAATGTTGGTGCTGTCTTGGTTGAGAATGAGTACCTCAGTGAAGTGTTTCTAAGAAG CATTGTCCTTGAAGGCTTCCCTGATGGGCCTGTGCACCTTACTTGTGAATCTTGGGTCCAGCCCAAACACGATAGTCCCA CAAAGAGAGTCTTCTTCACTAACAAGTCTTATTTGCCAACACAAACACCAACTGGATTGAGAAGGTTGAGAGAAGAGGAG CTAGTGCTGCTAAGAGGGAATGGAGAAGGAGTGCGCAAAAATTCAGACAGAATATATGATTATGATGTGTACAACGACCT TGGAGATCCTGATACTGAAATTGAACTCAAAAGACATGTTCTTGGTGGCTCCAAACAATTTCCATATCCAAGACGGTGTC GTACTGGTCGAAAACACTCGGATGCAGATCCATCGAGTGAAACAAGAAGTTCAAGTTTCTATGTTCCTCGTGATGAGTCA TTTGCCGAGATAAAGCAGACACAATTCGACAAAACCACATTATCCTCAGGAGTAAGTGCAGTTTTAGAATCCTTTGATGC AATTCTCACGGACACAAATCTTGGATTTGAAAGCTTCGAAGACATAGACACCCTTTTCAAAGAAGGGTTTCATCTGCCTC CTCTTAAAGGGAATGGGTTAAATTTGCTTCAAAGAGTCGTTCCTCACTTAATCAAAGCTGCTAATGATAGTCAAAACCTT TTGCGCTTTGATACACCAGAAGCAGTTCAAAGAGACAAATTCTTTTGGTTATCAGATGAGGAATTTGCAAGGGAGACTTT GGCTGGTGTTAACCCATATAGCATCCAATTAGTCAAGGAATGGCCTTTGAGAAGTAAACTAGACCCCCATATCTATGGTC CACAAGAATCTGTCATTACTTATGAAGTCATTGAATCACAAATAATTGGTTATTCCACAGTCGAAGAGGCTATCAAAGAG AAGAAATTGTTCATGCTAGACTACCATGACTTATTCTTACCATATGTAAGCAAAGTGAGAAAGATTCAGGGAACCACACT CTATGGATCACGAACATTGTTCTTTCTCACCAAAGAAAGCACATTGAAGCCACTAGCTATTGAGCTCACTAGACCAGCCC TGGATGGTAAGCCACAGTGGAAACAAGTCTTCACACCTGCTCCTCATTCCACAGGTCTTTGGCTTTGGAGGCTTGCCAAG ACTCATGTTCTTGCCCATGATTCTGGTTATCATGAACTTATAAGCCATTGGTTAAGGACTCATTGTGTTATAGAACCCTT TGTCATTGCAACAAATAGACAACTTAGCATCATGCACCCTATCTACAAGTTATTGCATCCGCATTTGAGATATACTATGG AGATCAACTCCCTTGCCCGCGAAGTGCTTATTAATGCAAATGGGATCATTGAAACCTCATTCTTTACTAGAAAATATTCA ATGGAATTAAGCTCTTTGGCATATGATCAACTTTGGCAATTTGATTTGCAATCACTTCCTAATGATCTTATTCACAGAGG AATGGCTATTGAAGATCCTAATGCTCCTCATGGCCTAAAGCTAACAGTTGAAGACTACCCTTTTGCCAATGATGGTCTCC TTCTATGGGATGCCATTAAACAATGGGTCACAGACTATGTAAACCATTATTATCCAAGCTTTGATGTCATAGAATCCGAC CACGAGCTCCAATCATGGTGGACAGAAATTCGAACTGTCGGTCACGGAGACAAATACGAAGAACCGTGGTGGCCAAATCT TAAAACACCAAAAGACCTTATTGACATCGTCACCACGGTAGCTTGGGTAGCCTCTGCTCATCATGCAGCTACAAACTTTG CCCAATATGCTTATGGAGGCTATTTCCCTAATCGACCCACAATTGCTAGGAACAAAATGCCTACAGAAGACCCTACTAAG GAAGAGTGGGAGAAGTTTTTAAATAAGCCTGAACAAACCCTTTTGGAGTGTTTCCCATCACAGATCCAAGCAACTTTAGT GATGGTCATCTTGAACTTGTTATCATATCATTCACCAGATGAAGAGTACCTGGGGCAATACATGGAACCATCATGGGCTG TGAATCCAACTATAAAGGAAGCCTTTGAAAGGTTTAGTGGGAGATTGAAGGAGATTGAAGGTATTATAGACTCAAGGAAT GCAGATAGTAATTTGAAGAATAGACATGGAGCTGGAGTGATTCCTTATGAGCTAATGAAACCACTTTCAAAGCCTGGAGT CACTGGAAAAGGAGTTCCATATAGCATAACCATTTAA
Protein sequence (LotjaGi6g1v0195200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMAATIRANTKTQTLKAFVSVKETSGGLLTNLVSGIVGKTLVLELVSEELDLKSNSERKTRKANAHKTQEKENEVQYEAT FQLPADFGNVGAVLVENEYLSEVFLRSIVLEGFPDGPVHLTCESWVQPKHDSPTKRVFFTNKSYLPTQTPTGLRRLREEE LVLLRGNGEGVRKNSDRIYDYDVYNDLGDPDTEIELKRHVLGGSKQFPYPRRCRTGRKHSDADPSSETRSSSFYVPRDES FAEIKQTQFDKTTLSSGVSAVLESFDAILTDTNLGFESFEDIDTLFKEGFHLPPLKGNGLNLLQRVVPHLIKAANDSQNL LRFDTPEAVQRDKFFWLSDEEFARETLAGVNPYSIQLVKEWPLRSKLDPHIYGPQESVITYEVIESQIIGYSTVEEAIKE KKLFMLDYHDLFLPYVSKVRKIQGTTLYGSRTLFFLTKESTLKPLAIELTRPALDGKPQWKQVFTPAPHSTGLWLWRLAK THVLAHDSGYHELISHWLRTHCVIEPFVIATNRQLSIMHPIYKLLHPHLRYTMEINSLAREVLINANGIIETSFFTRKYS MELSSLAYDQLWQFDLQSLPNDLIHRGMAIEDPNAPHGLKLTVEDYPFANDGLLLWDAIKQWVTDYVNHYYPSFDVIESD HELQSWWTEIRTVGHGDKYEEPWWPNLKTPKDLIDIVTTVAWVASAHHAATNFAQYAYGGYFPNRPTIARNKMPTEDPTK EEWEKFLNKPEQTLLECFPSQIQATLVMVILNLLSYHSPDEEYLGQYMEPSWAVNPTIKEAFERFSGRLKEIEGIIDSRN ADSNLKNRHGAGVIPYELMKPLSKPGVTGKGVPYSITI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 7 | 144 | 138 | 5.18E-35 | ||
| PANTHER | 7 | 838 | 832 | 0.0 | ||
| PANTHER | 7 | 838 | 832 | 0.0 | – | |
| Gene3D | 12 | 162 | 151 | 5.8E-42 | – | |
| SMART | 13 | 141 | 129 | 7.3E-26 | ||
| CDD | 14 | 141 | 128 | 6.44127E-42 | ||
| ProSiteProfiles | 17 | 140 | 124 | 21.067 | ||
| MobiDBLite | 54 | 73 | 20 | - | – | |
| Pfam | 64 | 139 | 76 | 2.9E-9 | ||
| PRINTS | 110 | 128 | 19 | 2.4E-66 | ||
| PRINTS | 136 | 157 | 22 | 2.4E-66 | ||
| ProSiteProfiles | 143 | 838 | 696 | 273.221 | ||
| SUPERFAMILY | 145 | 838 | 694 | 7.72E-263 | ||
| Pfam | 152 | 821 | 670 | 0.0 | ||
| Gene3D | 163 | 262 | 100 | 7.4E-38 | – | |
| PRINTS | 175 | 191 | 17 | 2.4E-66 | ||
| PRINTS | 208 | 227 | 20 | 2.4E-66 | ||
| MobiDBLite | 210 | 233 | 24 | - | – | |
| Gene3D | 263 | 352 | 90 | 1.3E-21 | ||
| PRINTS | 273 | 294 | 22 | 2.4E-66 | ||
| PRINTS | 321 | 337 | 17 | 2.4E-66 | ||
| Gene3D | 354 | 487 | 134 | 5.0E-50 | – | |
| PRINTS | 360 | 379 | 20 | 2.4E-66 | ||
| PRINTS | 428 | 452 | 25 | 2.4E-66 | ||
| PRINTS | 473 | 490 | 18 | 1.4E-21 | ||
| Gene3D | 488 | 836 | 349 | 2.2E-150 | – | |
| PRINTS | 491 | 508 | 18 | 1.4E-21 | ||
| ProSitePatterns | 491 | 505 | 15 | - | ||
| PRINTS | 511 | 531 | 21 | 1.4E-21 | ||
| ProSitePatterns | 518 | 528 | 11 | - | ||
| PRINTS | 751 | 765 | 15 | 2.4E-66 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi6g1v0195200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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