Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0200500 |
| Transcript ID | LotjaGi6g1v0200500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carboxypeptidase; TAIR: AT4G30810.1 serine carboxypeptidase-like 29; Swiss-Prot: sp|Q949Q7|SCP29_ARATH Serine carboxypeptidase-like 29; TrEMBL-Plants: tr|A0A1J7IKX3|A0A1J7IKX3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0200500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:49723436..49728859) extracted from Lotus japonicus Gifu genome v1.2.
TAAGAAAAAATGAAGAGTTTACGTAATGAATAATGCTGAAGTAAATAAATGAGTGAAGTTGCATTTATAGACCAGGTGAC TGTTGTATATGCGATTTGAGGTCTTTCTTTTGTGTATATCGGAAAGATAAATTGTATGCGTTAGGAATTGATCCCGGAAT CTTCCCCTACCCAACTCATATGTCTCTTAACTCCTACCAATTAAGCTATTTTACCGGGACTTGAGGTCTCTAAGAAGCGC TTTTAGGATGATGATTATATTTAAATAATATTGTCATATCTCATTACATACGTTGACTTAAAACATTGCTTACATATCTC CAAGCAAGCAGGCAACAACCATTGAAGCAGAAGCTTGTGGTTTTGGCAAATGGCCAAATCTGAGTGGTCTCAAATTTTGG CCATAGCCATAGTTGCCACCCTTTTGCTATGCATCAATTTTGCAACATCATCAGACCCATTTCTTCACCAACACCATGAC AAGGTTGGTAGGCTCCCTGGTCAAAACTTCAACACCAGCTTTGCACACTATTCTGGCTACATCACGGTCAATGACAAAGC TGGGAGAGCACTCTTCTACTGGTTCATGGAGGCAGATCATGATCCTCACTCCAAACCTCTTCTTTTATGGCTCAATGGAG GTTGATTGATTTAACCTTAAACTTTACTACAGTAACAGTAGTAGTCATCACTATTTGTTTTTTAGCTCAATTTTAGTCAT GTTTTCTTGTGATGGTTGTTGTAACTTTGATGATCAATTGATCATGCTCTGTTACTATTGGGATTGGAATGAAACAAAAA TTTCTTGGTGGGCTTTTCAGGACCTGGATGTTCATCCATTGCTTACGGGGAGGCAGAAGAAATTGGCCCGTTTCATATAA AGCCAGATGGCAAGACCCTTTATCTGAATCCTTATTCTTGGAATCAAGGTGAGTGAACCTACAAGCTATTCAAACTTTTT TATTTTAAATTTTTTCCCAATTTCTGAGAATGTTTCTCCCTGTTGGGGCAAGGAGAACATCTTCGAGATTTAGTCTGTTT GGATTTTCGTTGAACTCAAAGTGGATCCACTTTGAACTCATAAGGCAAAAATCCTGCTTCTCCAATCCAGAGTCAACGTG TCAAATTCCAGCTTCTCTGTTGAAACCTTGAGATGTTGAAATCACGTCAAACCAAACATACACTTAGATACAATGAGCTA ACCAAGGAAACCAAGAATTTGAACACCATATTCTGACCCAAATTCTTCAATATTAGGTCTATTGGTGTAACTGTTTGCAC TTGTATGATCCTCACTTTGTTTAATCCTTGTGAATTTGAACTTATTCTCCCTCATCTCCATTCACACTTAAATTTCCTGT CTTATGTCATCCTCTAGAGTTTTCAATGCTTATTTGATAACTACATCTGTGAATCTATGCCTACTGCACATATTGTGCTC CACAGCTTTTAATGCTTATCTGATAATGATAAGGGTCCCTACCTATGCCTACTGTCATATTGTTTTCACTTTCTTTAATG TCTATGTCGTGCTTATTATCTTAAGCTGCTCTGTATAACATGTCCTCCAATAGAAACTGTAAAGAAGTTGTCCTTTCTAT TGAAATAACTGCAAAAGGAATCTTACTTATGCTTATCATGTACTGGTTTTGATGAGCAGAACTGCAGAAATGAAAAATTA ATGAAGAAATAAGCTTCATAAATGCAATTTTGTCTAACCATTTGTGCTTTTTGTAGTTGCCAACATTCTTTTTGTCGACG CTCCTGCTGGAGTTGGATTTTCCTATTCAAATACTTCATCTGACTTGCTAAACCATGGCGATAAGAAGACAGGTAACACT TTTACCAGTTAGCATTCTTCTCTTCTCGTTACACACATATTCACATGCCAGTAGAATTAATAAAATTTTATGTGCAGCTG AGGACTCTCTGATATTTCTATTGAAGTGGTTTGAGCGTTTTCCCCAGTATAAAGGAAGAGACTTCTTTATCAGCGGCGAG AGCTATGCAGGTAAACAAAATTAGTGAGATGAGAACTCTCATTCTGGTAATCTGGTTCATTTACTTTACGTAGGATTTGT AATGTTCTAATTGTATTGGTCAATCTTTAATCCTGGGTTTCAGGGCATTATGTTCCTCAACTTAGCCAAGTTATTGTGAA GCACAACACAGCTGGTAAAGAAAATGCTATAAATCTGAAAGGTTACATGGTACTGAATCTACTGATTGCTTTTTTGGAAA AAAGTAATTCCTTGGTTAATGCTTCTTGTCATCATTATCTTAATCATTATAACTTTGCTGCAGGTGGGAAATGCTCTGTT AGATGATTACCATGATCAACTGGGCATGTACGAGTTCATGTGGTCAAGTGGGATGATTTCAGATGAAACATACAAGCTTT TGAACCTGCTATGTGATTCTCAGTCACTCATACACCCATCACACTCATGTGAAAATATTACTGAAATTGCTCATAGAGAA CTTGGCAATATAGATCCATACAGCATCTTTACTCCTGCTTGCCATGCTAATGTTAGCCAGTCAAGTCAGCCAGTGAAAAG AAAGCATGTGAGTGGACACTTCTTGCCATACAGCATTGAATTTAATTTCTTATGGTCTTAAGGAGCACAGTATTGCTGAC TGTTGATGATTTTCTTATGTCTCATGGTGCAGTATATGTATATATTTTCCAAAACATATGGTACTGTGAGTGAATGCTAT AAATAGCCTATAGTTGTTTCCTGTTGAAGCCAATGTTCTGTATCAAACTTCCTCTATATCCTATTTGTGTCTGACCATGT TTATCATAAGACATTCGTTAGTTTTTGGTTTAAATTCGGACATAAAAATCACGAAGTTAAACCCAAAAATATAGATTGTG ACATATTTCAAATGATAAGAATTTTTCGGCATGCTACAATGTGTCTTAGTTTTGAGATATTTATAGTGCAGATCCTTATT GATTTGTCATGTCATGTAACAGAGATTTGGTAGACTCGGTGCTGGGTATGATCCTTGCACAGCGGAGCACTCCACTATAT ACTTCAATCTACCTGAGGTCCAAAGGATTCTTCATGTTGATCCAAATCATAAGCCTGCTAAATGGGAGGCCTGCAGGTAA TGCTCATTATAGAAACACTTGAACGTATAGCTATTGCGATACATTCTTAATTCATTGCTGGAAAAGGTCAAACAACAAAT GAAATGAGGTTTATCATTCTGGTCTTTTTTATCAGTAAAAATAAAAATCATTTTAACACTCAGTTGCTATTTCTTCTTTA CAATTCTCCTTTCATTTTGAAACTAAAATTTCAAGAATCCTTGCAATTAAATCATTTGATGATTTTGATAATTGGTAGCA TATTTGGAGATTATAGGCCTAGCCTAATGTGCATTATTGTACTTCCTTCTATTTCTCTCCATTTTGCATATGTTTCATTT CTTTCACCAAATTTACAGAGATTAGAATCCATTTATTCATTACAGTGTAGTGATAAATTCCCACTGGAAGGATTCTCCAA GAACAGTGCTCAATGTTTTTCATGAACTTATTCATTCGGGACTGCGGATATGGGTTTTCAGGTTATTCTCATTTTCTAAT ATATACACATCCTTGCATTTGTGTTTACTCATTCATCTGCTGTCATACTTTGCATAAAAGTAATTCCACCCCCTTAAAAT GGCAAAAAGACAGAAATACCCCTTTTAAAAAACTTTCTCTTTGCATCCCCTTCCTCCCACCACCCCTGCTTCCTCATACC TTCTCTCATCTTTCTTCTTCCTTCACCAACACCTTCCCTTTTAATTTCTCTCTCCAAACCATCCTCCATTTCCTCCGCCT CCTTGCCCCAGTCGCCGCCGCCATCCGCCCCTAGGTCCATCGTCGCCATCACCTTTGCCATCGCCGCCATCGCCTCTGGT TAAGGTACTGCTCGCGTTCTTTTCACTTCGTTTCTGTTATCGTTCGCACTTTAAAGTGCATGTACTAGTCTTTGAAGTGC GTTAACAACGCACTTTAAAGTGCGCAAGCTACACTTTAAAGTGCGAAACATATCAGAATGCAGAAAAATTGGAAAAATTG TATGGTTGTTTACCTTTTTCTTTTGCCAATGTAGAAGGTATTACCATGAGTCCAGTTAAGTCCTATGAAGTAGACAAGTC GGAAGAAAAGTCATTATCTCAGAAGTTAGTTAAAACAGAGGATGTGCAAGACGAGCCACTTTCTGTGGATGATACAGACA GGTAACTTACTGTTTATGTCTATGACAATAACAAATTTAATCATATGTGACCTTGTAATGACCAATTGTATTTGCTTGTA GGTGTTTGCTTCTCGGGATGAAATATTGGAATGGGCTCGTAATCTTGGGAAGCAATTGGGCTTTGTTATTGTTATTACGA GGTCTGACGATGGTGGTGTTAACATGAAGACCTTTATGATAACAATTTATGTAATGGTGTTATCGTTAGTTGATCAAACA GTTTATCATAACAAAATACTTACATGACATGTGGTCAGTTGATTACCTTATTGTTATGTAATCATCTCATGCATTTTTAG GTCTATTCTTTCAAGTTTTGCATCAAACAATTTTTGCCTCCTAACATAACTTACATTTTCTGTCCTATATGTTATGTCAG TGGTAATACAGATGGAGTACTCCCTGTAACATCTACTCGCTATAGCATAAATGCTCTCAAGCTTTCAACTGTGAGCCCCT GGCGTCCATGGTATGATGATGAGGAGGTAGGAGGATGGACTCAAGAATATGCTGGACTCACGTTTGTAACTGTAAGGGGT GCAGGCCACGAAGTTCCTCTGCACAGACCAAAACTTGCTCTGACTTTGCTCAAATCCTTCTTAGCAGGAACCTCCATGCC CAAGCTCGAGCAACTCAGCAACTAGTGAAGTTTATGTTCACATTTCCATTTGTTTTTACCATGGAATATTCCTCTAAAAT TCTCCCTTATTCATCGTGAATTATAACACAATAAATAGGGGTTTGAATTGTGTGTGTGTAAAACTTATGTTTTCAAACGA TTATAAGTTTATAAAAGATTTTCGCAAGCATTTGGTGCAGCGGATATAAAAGTAATATTGTAAACGATACAAACACAACA ATATATCCTGGTTCACCCGCAAACGATGGAGTTACGTCCAGATTTTGGCTTAACCAAGATTTTCACTATTAAGTTTTAAG GACTTCTCCTACAACAAGTATTCGGTAGGACTTGTTACAAAGAGAACTGGAAATAAAGACAAGCGAATCCATTTGATTGG TTACCTTTCCTATATAATAGCAACTTATCTTTGTATTTTTTTCAAACATAAAATTAATAGGAAGACAGGGGTTTAGTTAA AATTTTGTTCGTAATGTATATAGAATAGCTCAAGTGGTAGGAGTTGGGGACATATGGATTTGGT
CDS sequence (LotjaGi6g1v0200500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAAATCTGAGTGGTCTCAAATTTTGGCCATAGCCATAGTTGCCACCCTTTTGCTATGCATCAATTTTGCAACATC ATCAGACCCATTTCTTCACCAACACCATGACAAGGTTGGTAGGCTCCCTGGTCAAAACTTCAACACCAGCTTTGCACACT ATTCTGGCTACATCACGGTCAATGACAAAGCTGGGAGAGCACTCTTCTACTGGTTCATGGAGGCAGATCATGATCCTCAC TCCAAACCTCTTCTTTTATGGCTCAATGGAGGACCTGGATGTTCATCCATTGCTTACGGGGAGGCAGAAGAAATTGGCCC GTTTCATATAAAGCCAGATGGCAAGACCCTTTATCTGAATCCTTATTCTTGGAATCAAGTTGCCAACATTCTTTTTGTCG ACGCTCCTGCTGGAGTTGGATTTTCCTATTCAAATACTTCATCTGACTTGCTAAACCATGGCGATAAGAAGACAGCTGAG GACTCTCTGATATTTCTATTGAAGTGGTTTGAGCGTTTTCCCCAGTATAAAGGAAGAGACTTCTTTATCAGCGGCGAGAG CTATGCAGGGCATTATGTTCCTCAACTTAGCCAAGTTATTGTGAAGCACAACACAGCTGGTAAAGAAAATGCTATAAATC TGAAAGGTTACATGGTGGGAAATGCTCTGTTAGATGATTACCATGATCAACTGGGCATGTACGAGTTCATGTGGTCAAGT GGGATGATTTCAGATGAAACATACAAGCTTTTGAACCTGCTATGTGATTCTCAGTCACTCATACACCCATCACACTCATG TGAAAATATTACTGAAATTGCTCATAGAGAACTTGGCAATATAGATCCATACAGCATCTTTACTCCTGCTTGCCATGCTA ATGTTAGCCAGTCAAGTCAGCCAGTGAAAAGAAAGCATAGATTTGGTAGACTCGGTGCTGGGTATGATCCTTGCACAGCG GAGCACTCCACTATATACTTCAATCTACCTGAGGTCCAAAGGATTCTTCATGTTGATCCAAATCATAAGCCTGCTAAATG GGAGGCCTGCAGTGTAGTGATAAATTCCCACTGGAAGGATTCTCCAAGAACAGTGCTCAATGTTTTTCATGAACTTATTC ATTCGGGACTGCGGATATGGGTTTTCAGGTTATTCTCATTTTCTAATATATACACATCCTTGCATTTGTGTTTACTCATT CATCTGCTGTCATACTTTGCATAA
Protein sequence (LotjaGi6g1v0200500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKSEWSQILAIAIVATLLLCINFATSSDPFLHQHHDKVGRLPGQNFNTSFAHYSGYITVNDKAGRALFYWFMEADHDPH SKPLLLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFVDAPAGVGFSYSNTSSDLLNHGDKKTAE DSLIFLLKWFERFPQYKGRDFFISGESYAGHYVPQLSQVIVKHNTAGKENAINLKGYMVGNALLDDYHDQLGMYEFMWSS GMISDETYKLLNLLCDSQSLIHPSHSCENITEIAHRELGNIDPYSIFTPACHANVSQSSQPVKRKHRFGRLGAGYDPCTA EHSTIYFNLPEVQRILHVDPNHKPAKWEACSVVINSHWKDSPRTVLNVFHELIHSGLRIWVFRLFSFSNIYTSLHLCLLI HLLSYFA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 9 | 9 | - | – | |
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| TMHMM | 7 | 26 | 20 | - | – | |
| Phobius | 10 | 22 | 13 | - | – | |
| PANTHER | 14 | 382 | 369 | 2.0E-182 | ||
| PANTHER | 14 | 382 | 369 | 2.0E-182 | – | |
| Phobius | 23 | 27 | 5 | - | – | |
| Phobius | 28 | 379 | 352 | - | – | |
| Gene3D | 32 | 303 | 272 | 2.8E-106 | ||
| SUPERFAMILY | 35 | 382 | 348 | 1.76E-99 | ||
| Pfam | 43 | 382 | 340 | 4.0E-111 | ||
| PRINTS | 120 | 132 | 13 | 4.2E-22 | ||
| PRINTS | 133 | 143 | 11 | 4.2E-22 | ||
| PRINTS | 169 | 194 | 26 | 4.2E-22 | ||
| ProSitePatterns | 183 | 190 | 8 | - | ||
| Gene3D | 316 | 383 | 68 | 1.1E-7 | – | |
| Phobius | 380 | 406 | 27 | - | – | |
| Phobius | 407 | 407 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type carboxypeptidase activity | Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi6g1v0200500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…