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LotjaGi6g1v0216700.2

Overview

Field Value
Gene ID LotjaGi6g1v0216700
Transcript ID LotjaGi6g1v0216700.2
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Receptor-like protein kinase; TAIR: AT5G18500.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q8LEB6|Y5185_ARATH Probable receptor-like protein kinase At5g18500; TrEMBL-Plants: tr|V7B271|V7B271_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0216700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:51856109..51859614) extracted from Lotus japonicus Gifu genome v1.2.

ATGGCATCTGATCTAAATTCAGGGCTGTCCAAGAAAACGTTTGTTTTGGGATTGAAAGTATGGGTATTGATGGGGATAAT AGTTGGGTTGTTCATTATAATCATTCTTGCGGTGCTATCAATATGTCTTAGTTTAAGAAAGAAGGCCAGAAGAGTTGGTG GCAACCTTCCCCTTAGCCATATCTTATCTGTTTCAGAAGAGATCAAAGAAATTAGAGTTGATCAAGTCTCATCAAATAAT CACCAGCAATATGGTGCTTTTATGAGTCTGAATGACAAATTTGGTGATGCGGTGTCTGAAAAGGTTTCGATCCAAACAAA GAACGGGGATAATAGTAGTCAATCAGGCTCATTTAGTCATTTAGAGAAAGATGTTTATGGCACTCAATCAGGTGAGGAGA GTGGTGCTAGGAGTTCTTCTGCTTACAGATCTTCACATCCAATAACTGCACCATCCCCTTTGACTGGTTTGCCGGAATTC TCTCACCTTGGCTGGGGCCACTGGTTTACATTAAGGGACCTGGAACTTGCAACCAACAGGTTTTCAAAAGACAATGTTAT TGGTGAAGGGGGTTATGGAGTTGTTTATCGAGGTCAACTTATCAATGGGAATCCTGTGGCAATTAAGAAGCTCCTCAATA ATTTGTATGTGTTGTTAATCACTTGTTTAGTTGCATTGCAGCCTTTATAAGGTCTTGTTTCATGTTTTTTTTTTGTATGT CTGAGGATGCAGCTAATTTATTTACTAACTGTTGATAACCATCATGCAGAGGACAGGCTGAAAAGGAATTTAGGGTGGAA GTTGAAGCTATTGGTCATGTGCGGCATAAGAACTTGGTGCGACTTTTGGGCTTTTGCATTGAAGGTACTCACAGGTAATA AATTGGTTATTGTTTGAATTGTATGTGTGTGTGGTCCGTTTATGTCTCTCCATCTTGATTTGATCATTTGAATAACAGCT GAAAGGCTTACAGTGTTGTTAATGTCTCCATTTATACTACTTATCTTACAAATCTATTAACTGCTTGAAAAATTAAGAGG CTGTTTGTATCGATGTTGGAAGCCTCTTAAATGGTCATTAGCTAAAAGTGAAAAATGGTTGCTCTCACATTTTTTGTATG GGAATGTGTGCTAAAAACACGCGGAAATGCCTTCGCAAGTTGGATTAGCTTTTTAGTATGGAGTTTCTTGTTGAATAACA TATGGCTTAATGTCACAGTTGGATTAGCTTACTAATCTCAAAGTACTGGTTTGTATTATTTGCAATTTTGTTCTGATTGA ACCTGCTATTAATTTCAGGTTGTTGGTTTATGAATATGTTAACAATGGCAATTTAGAGCAGTGGCTTCACGGAGCTATGC GACAGCATGGCTTTCTTACTTGGGAGGCTCGGATGAAAATTCTACTTGGAACAGCCAAAGCGTATGCTCATCTTCCTGAA ATAAAAAACTAATCTAGTAGTTGTCCTGTTTATTTTTTTGGGTGAAATTCCTTTTGATTTATTTATGATTGTTATGTCTT GTAGGCTGGCTTACTTGCACGAGGCAATTGAGCCAAAAGTGGTGCACCGAGATATTAAGTCGAGCAATATTCTAATTGAT GATGACTTTAATGCCAAAATATCTGACTTTGGGCTGGCTAAGTTACTGGGTGCTGGAAAAAGTCATATTACAACTAGAGT AATGGGAACTTTTGGGTAAGCTTCATGTTTACAAATTTAAGACTTGTTTATTTTCTGTTTGATAATTAGTTTCTTTATAG ATGCTTACTTAATTTGGTATACTGACGTATGCATGTTGCGTTTTTTATAATTTATCCTGAAAATTGAGAAACTATATAAT TAATAGTTGCAAATTGTATATTTTTCCTTAACAATCTATGATGTTTCTACCAAAACATAGCATATATTCATTTGCTCACA AAATTTGGCAGAGTTGCCTTTTTATTCCTTAAGACAATATAGCTGTCTCAATTTGTCACCTTTTCGTGCTTGCATTGCAT AATCCGGCTTACTAATTGAAAAATAATGATCAAGTGTACATTTTTCATAAAACATCTGTGATAAATTTGTGACCTTGAAA TTTCATTTTGACTATATGGTAGCCAACATTCATTAAATTGACATAATTTTAGTTCTGATTGTAGAAATCGAAACTGCCTA TAGTTTGCTCATTCTTTTTTCTCGCTTGCATTTCATTTTTCCAGATATGTAGCTCCAGAATATGCCAATTCTGGGTTGCT AAACGAGAAGAGCGACGTTTACAGCTATGGGGTATTGCTCCTTGAAGCAATTACGGGAAGAGATCCAGTGGACTATAGCC GACCTGCAGCTGAGGTGTGTGATTGGCTCTTTTTAAAGAAACCATAAAAACTTATTTATGTAAATTCAATATTATTCTGA TTTAATTTGAATGATGAATGTGAAGAATGAAAAATATTGAAAATTTTCTTGGTGTACATGACAGCTTTTTCACTTCCTAT AACTACAGTTTTGGCACATTAGACTTTCCTTAATGCTATCTGTTGTTTCTTGTAGGTAAATTTGGTTGACTGGCTTAAGA TGATGGTGGGGTGTAGGCGATCGGAAGAGGTGGTGGACTCCAACATTGAGACTAGGCCATCAACAAGTGCCCTTAAACGA GCCCTTTTGACAGCTTTGAGGTGTGTTGATCCAGATTCTGAAAAAAGACCAAAGATGAGCCAAGTTGTCCGCATGCTTGA ATCAGAGGAATATCCCATACCTCGAGAGGTTTGACCTCTGATTTTTATCTCTACATCACAATGTGTTTCCAACTTGGCAT GTCAGTTAGTGTTTTTCATGAAATTACATTTGGTTCCTTGCAACAACATTTGAAAAGGTAATAGCAAAGTAAAGCAAGCG AGGCAGGGAAGGCAAAGGGAGTGGGAAATACTACATTGTTACATTCCATTTTTTCCCAAAAAACTCTTCACATCTACTCT GAGACCACTTCGAAGCAACTTATAGAATGTTTGGAAAAAACCAGGATCCGGCTTCCTTGCAGTCAGAATTCCCTTAATTT ATTGTAGTCATGGTTAGGTAGTCGTCCGATCTTAATCTGACGGCTCAGGTTTAAAATGTTAACTACTCTTGATATACATC TCTTTAAATTTGAGCCTTCTTCTGCTCTTGATCGAACGAGTTGTGAGCCATGATGCAATGACTTAAGGGAATTCTGATGG CAGGGAATCCGAATCTAGAAAAACACATGGAGCAAAAATTGCCTAAACCCACCATTATTGTGAGTAGCTTCTAATGAAGA TATGTGAATCTCACTACTCCGAACATGGACTCAAACACCATAGTTTCATTTTAAAATTTACAATGCTTGTTATGTTTCTA AATGTTGTGGGTGACGTTTCAGGATCGAAGACGGCGTAAGAGTCAGGCAGGAAACAAAGATCTAGAGAGCCAGAGGGAGA CTTCTGATACAGAGAAGAGTGATAATCCAGATTATAAGCCCAATGGCAGAAGGGACTAAGGCATGA
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0216700.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCATCTGATCTAAATTCAGGGCTGTCCAAGAAAACGTTTGTTTTGGGATTGAAAGTATGGGTATTGATGGGGATAAT AGTTGGGTTGTTCATTATAATCATTCTTGCGGTGCTATCAATATGTCTTAGTTTAAGAAAGAAGGCCAGAAGAGTTGGTG GCAACCTTCCCCTTAGCCATATCTTATCTGTTTCAGAAGAGATCAAAGAAATTAGAGTTGATCAAGTCTCATCAAATAAT CACCAGCAATATGGTGCTTTTATGAGTCTGAATGACAAATTTGGTGATGCGGTGTCTGAAAAGGTTTCGATCCAAACAAA GAACGGGGATAATAGTAGTCAATCAGGCTCATTTAGTCATTTAGAGAAAGATGTTTATGGCACTCAATCAGGTGAGGAGA GTGGTGCTAGGAGTTCTTCTGCTTACAGATCTTCACATCCAATAACTGCACCATCCCCTTTGACTGGTTTGCCGGAATTC TCTCACCTTGGCTGGGGCCACTGGTTTACATTAAGGGACCTGGAACTTGCAACCAACAGGTTTTCAAAAGACAATGTTAT TGGTGAAGGGGGTTATGGAGTTGTTTATCGAGGTCAACTTATCAATGGGAATCCTGTGGCAATTAAGAAGCTCCTCAATA ATTTAGGACAGGCTGAAAAGGAATTTAGGGTGGAAGTTGAAGCTATTGGTCATGTGCGGCATAAGAACTTGGTGCGACTT TTGGGCTTTTGCATTGAAGGTACTCACAGGTTGTTGGTTTATGAATATGTTAACAATGGCAATTTAGAGCAGTGGCTTCA CGGAGCTATGCGACAGCATGGCTTTCTTACTTGGGAGGCTCGGATGAAAATTCTACTTGGAACAGCCAAAGCGCTGGCTT ACTTGCACGAGGCAATTGAGCCAAAAGTGGTGCACCGAGATATTAAGTCGAGCAATATTCTAATTGATGATGACTTTAAT GCCAAAATATCTGACTTTGGGCTGGCTAAGTTACTGGGTGCTGGAAAAAGTCATATTACAACTAGAGTAATGGGAACTTT TGGATATGTAGCTCCAGAATATGCCAATTCTGGGTTGCTAAACGAGAAGAGCGACGTTTACAGCTATGGGGTATTGCTCC TTGAAGCAATTACGGGAAGAGATCCAGTGGACTATAGCCGACCTGCAGCTGAGGTAAATTTGGTTGACTGGCTTAAGATG ATGGTGGGGTGTAGGCGATCGGAAGAGGTGGTGGACTCCAACATTGAGACTAGGCCATCAACAAGTGCCCTTAAACGAGC CCTTTTGACAGCTTTGAGGTGTGTTGATCCAGATTCTGAAAAAAGACCAAAGATGAGCCAAGTTGTCCGCATGCTTGAAT CAGAGGAATATCCCATACCTCGAGAGGATCGAAGACGGCGTAAGAGTCAGGCAGGAAACAAAGATCTAGAGAGCCAGAGG GAGACTTCTGATACAGAGAAGAGTGATAATCCAGATTATAAGCCCAATGGCAGAAGGGACTAA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0216700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASDLNSGLSKKTFVLGLKVWVLMGIIVGLFIIIILAVLSICLSLRKKARRVGGNLPLSHILSVSEEIKEIRVDQVSSNN HQQYGAFMSLNDKFGDAVSEKVSIQTKNGDNSSQSGSFSHLEKDVYGTQSGEESGARSSSAYRSSHPITAPSPLTGLPEF SHLGWGHWFTLRDLELATNRFSKDNVIGEGGYGVVYRGQLINGNPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRL LGFCIEGTHRLLVYEYVNNGNLEQWLHGAMRQHGFLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFN AKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSYGVLLLEAITGRDPVDYSRPAAEVNLVDWLKM MVGCRRSEEVVDSNIETRPSTSALKRALLTALRCVDPDSEKRPKMSQVVRMLESEEYPIPREDRRRRKSQAGNKDLESQR ETSDTEKSDNPDYKPNGRRD
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
NON_CYTOPLASMIC_DOMAIN
1 19 19 - –
Phobius
TRANSMEMBRANE
20 43 24 - –
TMHMM
TMhelix
20 42 23 - –
Phobius
CYTOPLASMIC_DOMAIN
44 500 457 - –
PANTHER
PTHR27001:SF862
125 475 351 4.1E-212 –
PANTHER
PTHR27001
125 475 351 4.1E-212 –
Gene3D
G3DSA:3.30.200.20
162 256 95 8.0E-35 –
SUPERFAMILY
SSF56112
165 460 296 1.12E-84
IPR011009
SMART
SM00220
181 452 272 2.5E-38
IPR000719
ProSiteProfiles
PS50011
181 458 278 38.718
IPR000719
Pfam
PF00069
182 450 269 3.1E-50
IPR000719
ProSitePatterns
PS00107
187 210 24 -
IPR017441
CDD
cd14066
187 453 267 1.21055E-101 –
Gene3D
G3DSA:1.10.510.10
257 477 221 7.5E-64 –
ProSitePatterns
PS00108
303 315 13 -
IPR008271
MobiDBLite
mobidb-lite
439 500 62 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0216700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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