Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0216700 |
| Transcript ID | LotjaGi6g1v0216700.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like protein kinase; TAIR: AT1G56720.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q8LEB6|Y5185_ARATH Probable receptor-like protein kinase At5g18500; TrEMBL-Plants: tr|V7B271|V7B271_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0216700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:51856630..51859752) extracted from Lotus japonicus Gifu genome v1.2.
CAGGTGAAGAGTTTGGTGTCATAACTCATAACCATAGTCTAGAAAAATGTTTCATTTTGCAACTTGATTTTCTGTGTGCA TCAAAGTGCCTTTAATATTTCAACACTGTCTTCTGCAGGTTTATTTGGCAGCAGCAAAATGGCATCTGATCTAAATTCAG GGCTGTCCAAGAAAACGTTTGTTTTGGGATTGAAAGTATGGGTATTGATGGGGATAATAGTTGGGTTGTTCATTATAATC ATTCTTGCGGTGCTATCAATATGTCTTAGTTTAAGAAAGAAGGCCAGAAGAGTTGGTGGCAACCTTCCCCTTAGCCATAT CTTATCTGTTTCAGAAGAGATCAAAGAAATTAGAGTTGATCAAGTCTCATCAAATAATCACCAGCAATATGGTGCTTTTA TGAGTCTGAATGACAAATTTGGTGATGCGGTGTCTGAAAAGGTTTCGATCCAAACAAAGAACGGGGATAATAGTAGTCAA TCAGGCTCATTTAGTCATTTAGAGAAAGATGTTTATGGCACTCAATCAGGTGAGGAGAGTGGTGCTAGGAGTTCTTCTGC TTACAGATCTTCACATCCAATAACTGCACCATCCCCTTTGACTGGTTTGCCGGAATTCTCTCACCTTGGCTGGGGCCACT GGTTTACATTAAGGGACCTGGAACTTGCAACCAACAGGTTTTCAAAAGACAATGTTATTGGTGAAGGGGGTTATGGAGTT GTTTATCGAGGTCAACTTATCAATGGGAATCCTGTGGCAATTAAGAAGCTCCTCAATAATTTGTATGTGTTGTTAATCAC TTGTTTAGTTGCATTGCAGCCTTTATAAGGTCTTGTTTCATGTTTTTTTTTTGTATGTCTGAGGATGCAGCTAATTTATT TACTAACTGTTGATAACCATCATGCAGAGGACAGGCTGAAAAGGAATTTAGGGTGGAAGTTGAAGCTATTGGTCATGTGC GGCATAAGAACTTGGTGCGACTTTTGGGCTTTTGCATTGAAGGTACTCACAGGTAATAAATTGGTTATTGTTTGAATTGT ATGTGTGTGTGGTCCGTTTATGTCTCTCCATCTTGATTTGATCATTTGAATAACAGCTGAAAGGCTTACAGTGTTGTTAA TGTCTCCATTTATACTACTTATCTTACAAATCTATTAACTGCTTGAAAAATTAAGAGGCTGTTTGTATCGATGTTGGAAG CCTCTTAAATGGTCATTAGCTAAAAGTGAAAAATGGTTGCTCTCACATTTTTTGTATGGGAATGTGTGCTAAAAACACGC GGAAATGCCTTCGCAAGTTGGATTAGCTTTTTAGTATGGAGTTTCTTGTTGAATAACATATGGCTTAATGTCACAGTTGG ATTAGCTTACTAATCTCAAAGTACTGGTTTGTATTATTTGCAATTTTGTTCTGATTGAACCTGCTATTAATTTCAGGTTG TTGGTTTATGAATATGTTAACAATGGCAATTTAGAGCAGTGGCTTCACGGAGCTATGCGACAGCATGGCTTTCTTACTTG GGAGGCTCGGATGAAAATTCTACTTGGAACAGCCAAAGCGTATGCTCATCTTCCTGAAATAAAAAACTAATCTAGTAGTT GTCCTGTTTATTTTTTTGGGTGAAATTCCTTTTGATTTATTTATGATTGTTATGTCTTGTAGGCTGGCTTACTTGCACGA GGCAATTGAGCCAAAAGTGGTGCACCGAGATATTAAGTCGAGCAATATTCTAATTGATGATGACTTTAATGCCAAAATAT CTGACTTTGGGCTGGCTAAGTTACTGGGTGCTGGAAAAAGTCATATTACAACTAGAGTAATGGGAACTTTTGGGTAAGCT TCATGTTTACAAATTTAAGACTTGTTTATTTTCTGTTTGATAATTAGTTTCTTTATAGATGCTTACTTAATTTGGTATAC TGACGTATGCATGTTGCGTTTTTTATAATTTATCCTGAAAATTGAGAAACTATATAATTAATAGTTGCAAATTGTATATT TTTCCTTAACAATCTATGATGTTTCTACCAAAACATAGCATATATTCATTTGCTCACAAAATTTGGCAGAGTTGCCTTTT TATTCCTTAAGACAATATAGCTGTCTCAATTTGTCACCTTTTCGTGCTTGCATTGCATAATCCGGCTTACTAATTGAAAA ATAATGATCAAGTGTACATTTTTCATAAAACATCTGTGATAAATTTGTGACCTTGAAATTTCATTTTGACTATATGGTAG CCAACATTCATTAAATTGACATAATTTTAGTTCTGATTGTAGAAATCGAAACTGCCTATAGTTTGCTCATTCTTTTTTCT CGCTTGCATTTCATTTTTCCAGATATGTAGCTCCAGAATATGCCAATTCTGGGTTGCTAAACGAGAAGAGCGACGTTTAC AGCTATGGGGTATTGCTCCTTGAAGCAATTACGGGAAGAGATCCAGTGGACTATAGCCGACCTGCAGCTGAGGTGTGTGA TTGGCTCTTTTTAAAGAAACCATAAAAACTTATTTATGTAAATTCAATATTATTCTGATTTAATTTGAATGATGAATGTG AAGAATGAAAAATATTGAAAATTTTCTTGGTGTACATGACAGCTTTTTCACTTCCTATAACTACAGTTTTGGCACATTAG ACTTTCCTTAATGCTATCTGTTGTTTCTTGTAGGTAAATTTGGTTGACTGGCTTAAGATGATGGTGGGGTGTAGGCGATC GGAAGAGGTGGTGGACTCCAACATTGAGACTAGGCCATCAACAAGTGCCCTTAAACGAGCCCTTTTGACAGCTTTGAGGT GTGTTGATCCAGATTCTGAAAAAAGACCAAAGATGAGCCAAGTTGTCCGCATGCTTGAATCAGAGGAATATCCCATACCT CGAGAGGTTTGACCTCTGATTTTTATCTCTACATCACAATGTGTTTCCAACTTGGCATGTCAGTTAGTGTTTTTCATGAA ATTACATTTGGTTCCTTGCAACAACATTTGAAAAGGTAATAGCAAAGTAAAGCAAGCGAGGCAGGGAAGGCAAAGGGAGT GGGAAATACTACATTGTTACATTCCATTTTTTCCCAAAAAACTCTTCACATCTACTCTGAGACCACTTCGAAGCAACTTA TAG
CDS sequence (LotjaGi6g1v0216700.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCTGATCTAAATTCAGGGCTGTCCAAGAAAACGTTTGTTTTGGGATTGAAAGTATGGGTATTGATGGGGATAAT AGTTGGGTTGTTCATTATAATCATTCTTGCGGTGCTATCAATATGTCTTAGTTTAAGAAAGAAGGCCAGAAGAGTTGGTG GCAACCTTCCCCTTAGCCATATCTTATCTGTTTCAGAAGAGATCAAAGAAATTAGAGTTGATCAAGTCTCATCAAATAAT CACCAGCAATATGGTGCTTTTATGAGTCTGAATGACAAATTTGGTGATGCGGTGTCTGAAAAGGTTTCGATCCAAACAAA GAACGGGGATAATAGTAGTCAATCAGGCTCATTTAGTCATTTAGAGAAAGATGTTTATGGCACTCAATCAGGTGAGGAGA GTGGTGCTAGGAGTTCTTCTGCTTACAGATCTTCACATCCAATAACTGCACCATCCCCTTTGACTGGTTTGCCGGAATTC TCTCACCTTGGCTGGGGCCACTGGTTTACATTAAGGGACCTGGAACTTGCAACCAACAGGTTTTCAAAAGACAATGTTAT TGGTGAAGGGGGTTATGGAGTTGTTTATCGAGGTCAACTTATCAATGGGAATCCTGTGGCAATTAAGAAGCTCCTCAATA ATTTAGGACAGGCTGAAAAGGAATTTAGGGTGGAAGTTGAAGCTATTGGTCATGTGCGGCATAAGAACTTGGTGCGACTT TTGGGCTTTTGCATTGAAGGTACTCACAGGTTGTTGGTTTATGAATATGTTAACAATGGCAATTTAGAGCAGTGGCTTCA CGGAGCTATGCGACAGCATGGCTTTCTTACTTGGGAGGCTCGGATGAAAATTCTACTTGGAACAGCCAAAGCGCTGGCTT ACTTGCACGAGGCAATTGAGCCAAAAGTGGTGCACCGAGATATTAAGTCGAGCAATATTCTAATTGATGATGACTTTAAT GCCAAAATATCTGACTTTGGGCTGGCTAAGTTACTGGGTGCTGGAAAAAGTCATATTACAACTAGAGTAATGGGAACTTT TGGATATGTAGCTCCAGAATATGCCAATTCTGGGTTGCTAAACGAGAAGAGCGACGTTTACAGCTATGGGGTATTGCTCC TTGAAGCAATTACGGGAAGAGATCCAGTGGACTATAGCCGACCTGCAGCTGAGGTAAATTTGGTTGACTGGCTTAAGATG ATGGTGGGGTGTAGGCGATCGGAAGAGGTGGTGGACTCCAACATTGAGACTAGGCCATCAACAAGTGCCCTTAAACGAGC CCTTTTGACAGCTTTGAGGTGTGTTGATCCAGATTCTGAAAAAAGACCAAAGATGAGCCAAGTTGTCCGCATGCTTGAAT CAGAGGAATATCCCATACCTCGAGAGGTAATAGCAAAGTAA
Protein sequence (LotjaGi6g1v0216700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASDLNSGLSKKTFVLGLKVWVLMGIIVGLFIIIILAVLSICLSLRKKARRVGGNLPLSHILSVSEEIKEIRVDQVSSNN HQQYGAFMSLNDKFGDAVSEKVSIQTKNGDNSSQSGSFSHLEKDVYGTQSGEESGARSSSAYRSSHPITAPSPLTGLPEF SHLGWGHWFTLRDLELATNRFSKDNVIGEGGYGVVYRGQLINGNPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRL LGFCIEGTHRLLVYEYVNNGNLEQWLHGAMRQHGFLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFN AKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSYGVLLLEAITGRDPVDYSRPAAEVNLVDWLKM MVGCRRSEEVVDSNIETRPSTSALKRALLTALRCVDPDSEKRPKMSQVVRMLESEEYPIPREVIAK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 20 | 43 | 24 | - | – | |
| Phobius | 44 | 466 | 423 | - | – | |
| PANTHER | 124 | 462 | 339 | 1.9E-211 | – | |
| PANTHER | 124 | 462 | 339 | 1.9E-211 | – | |
| Gene3D | 162 | 256 | 95 | 7.2E-35 | – | |
| SUPERFAMILY | 165 | 456 | 292 | 1.48E-84 | ||
| SMART | 181 | 452 | 272 | 2.5E-38 | ||
| ProSiteProfiles | 181 | 458 | 278 | 38.718 | ||
| Pfam | 182 | 450 | 269 | 2.5E-50 | ||
| ProSitePatterns | 187 | 210 | 24 | - | ||
| CDD | 187 | 453 | 267 | 8.51807E-102 | – | |
| Gene3D | 257 | 459 | 203 | 9.8E-64 | – | |
| ProSitePatterns | 303 | 315 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0216700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…