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LotjaGi6g1v0221700.3

Overview

Field Value
Gene ID LotjaGi6g1v0221700
Transcript ID LotjaGi6g1v0221700.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT1G52310.1 protein kinase family protein / C-type lectin domain-containing protein; Swiss-Prot: sp|Q9C823|Y1523_ARATH C-type lectin receptor-like tyrosine-protein kinase At1g52310; TrEMBL-Plants: tr|A0A072V7K8|A0A072V7K8_MEDTR C-type lectin receptor-like tyrosine-kinase plant; Found in the gene: LotjaGi6g1v0221700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:52630878..52635071) extracted from Lotus japonicus Gifu genome v1.2.

TTTATAATGAAATGTGTGTGCTTGAAGTCACATCTTGATAATCATTTCTCTACTGTGTGAGGATAGGCTTTGAATACTCA TGCTCTAGTTAGTAACCGTAATCCATGTATTACATAATTTAATTTTCTTTGTGCAGCACCATGTCCAATTGGCTGGGTTA TTGACCCTAATAATAAGACCAGGTGCTTTCTCCATGTTGAGAGTCCTCAATCTTGGAATGACTCAGAGACTTGTTGTGAT AAATATGGTGGACATTTAGCATCATTGACATCACTTCAGGAACTACACTTTGCTCAAAGTCTGTGTGGTGAGTCTATAAA TAGTTGCTGGATTGGTGGAAGAAGACTCAACTCTACGGGTGGTTTTCAGTGGATGTGGTCTGATAATTCTCAGTGGAATA AGTCCATGTTTCCTTTGGTCAATTGTACTGGAACTGGACTATCTTGTCATGTAAACAGCACATACAATTTATGTACAGTG GTGACTAATAACTCAAAATCTCTCATTAGTGAGAGGTGTGACAATCCTCATGCTTCTCTATGCATACTGGAAATAGGTGT GCTTTTTGTATACATTACTTGTCCATTCCATTCTCATTTTACATTCCATTCTCATATTTACCAATTCTTTTATTCTCTTT CCCAAAAGTTTTGTTTTTTGTTACCTATTCTTGAGAAATATGTTGCACTATTGCTTATTGTAACTTTTTTTTTCCTTTTC TTTTCTTATATCTCGATTACACTTTATGTAATTTTTTAATAATCATTGCCTACTTAACTATTGATTCTGTTTTTTTTTTC CTCATCTCAGATACCAAATGTAAACATATGCACTGCCACAGGGAATACCTTATCATCCTTGCAGTGGTGAGTGCATTGAT ACTCTCCACAACATTAGCAGTGGTACTTTGGCTTCTTTTATGTAAACGGGGCAAGAAGAGACGACGGTCTAGAAAACTAT CTGATCCAGCTTCTCTTCCATCATGGAAAGTCTTTACCAAAGAGGAATTGAGGTCAATTACTAAGAATTTCAGTGAAGGT AACCGTCTTGTCGGGGATACGAAGACTGGTGGTACATACAGTGGGGTCCAACCAGATGGCTCAAAGGTTGCAGTTAAGAG AATAAAGAGGTCAAGCTTTCAGAGGAAAAAGGAGTTCTATTCTGAAATAAACAGGGTTGCAAGGCTTCGTCATCCAAATC TGGTGACTGTAGTGGGGTGCTGCTATGGTCATGGTGACCGCTACATTGTTTACGAGTTTGTAGCCAATGGACCCTTAGAT AAATGGCTGCATCACATACCAAGAGGAGGTCGCAGCTTAGATTGGGCTATGAGGATGAAAATTGCAACAACACTTGCTCA AGGAATTGCGTATGTCCAAAATATACTTTTTCTTTTATAACTTTCTGCGTGTTGATTTATAACTTTTTCTTTCCTTATTT AGATACATATTTTGACTTGATTAGTAGAAGATTAGAAGTGTTCTTATTGTGCATCTTGAACTTTTTTGGTTGTAAGTTGT AACTAACTGTGAGCATTTAGGTTATTGACATATTAGTAAATCCCAGATAGCGGCCAGCCCCAAAAGTGGAATAGCGGTAT ATTGCATAGCGGGATGGCCGCTATGCTGATTTTTTATATATAATTTTATATACTTAATAATTTAATACTATATACATATA AATACTCAAATTATAAATATTACCTAAAATTCATAACACTGGTTGTCGAAGACACAATGGTTGCCAGAGAAGGGGGGGTC GAAGAGGAGTTTCGAGAAGGAATGCTGGAGCGAGTAAAATTAGATGCGTGAGAGTTATTCAGTGGGCTTTGACCTAAATT TTCCCTTGAAGTTCCAATTATGCCCCCAAAAAGGTCACCCAACAGTTTAAAACCGAGGGCTTTGTGTCATTTTCCTGCCT GTCACATTTGCGCCGAGATTTCCCGCAAATGGCCGCGATTTCTATGCGCGATGCATGAGACACCTTTTAGTGGCAGGACT CCGCTATAGTGGTGCAATCGCGAGCTATTTACTAGTGAGTAGTGCCAACTCTGGGTTATTCTCCCTTGGTCTTTGCAGTT TGTATGCATTCTGTATAATTTGTACTGCATTGCCACTTTGAATTATTTATCAAATCCAGTTAAGAATTATCATGCTTAGG ATTTCCAAAATGCAGCTATCAAACCAACCATCCTCATATTGGATTTTAATTTTATATTCAGATCAATAATCATCATCTTC CTCCTGTCTTTTGATGAGACAGGGGTCTCCACTTAGCCAATTAACATGTTATTGGAATAGTAGTGCTAAATTAGTTAAAA TTGCTCAGCTGATGTATGTAGTCCTCAATCTCCTCTGAGAAATAAAAATTCTGAGTGTATTTTTTGGGTGGATAGGATAA TGTTAGAACCAACCATTATTTATTTACGTCCATTAATTTTGCTTTTATATCTTTCTCTCTATGACATTATCCTGTCATGT TATCTTTGTCTATTAGAAAAGAGGAAATAGTTAAGGTGCTTTTAATCAGAATTGTCAATAGCCGCTTTTGGCTTAAACTT ATTGGTTACCTTGAATTTGCTAGTATTTACTTGTATGATTTTTTAAGACACCTATGACTTTTTATTGTTAATTATAAATG TGATTTTTGACTATCCCCCCCCCCCCCCAATTTTTTAGCATTTTTATATGTATATAGTCTAAAATATAAATTATTTACAC TGTAAAAATTCATCATAGCGGCCATATATACCGTTATAGCATTTTCTGGATCAGCCGCTATCCAGGATTGATAATACTGC TCGTAATAACTGAGTTTCATATTCATTAATTATGGTATGTGCTATCTACAGTTTTCCTAGTCCAGCACCAGACAGTTGAT TTATTTGGTCGACACACCAGACAGTAACTAAATCAGGATTCTTTTTCTTACCAGATAAAAATAATTTAGTTTAAATTAAC CTTCTCTTGTTGTGTTCATCTGTTGTTTAGTCAATATAAACTTTTTTTGTGCACTAGGCCTTTCAACTTTGAAGGTCATT TAAAACATGAAAGATGTATCACTTGGCATAAATCTTTAAGGAAATTTTCCTGGATGGATCAGACGAATTCCGTACTTCTT TGTTTCACGTCTATTGTGATGTTCAACAAATTATTGATAATTTGTGGTCCTATGGTAGCCCAAGTTCTATCAACTAATTG ACTTATTTATGTTTCTTATGATGCTACCTTTTTATTATATAAAATATGCATGGCCTTGTATCCGGATCTAGGATATCATG AAGAAATCTGTTAGATTTTGAGATTTCAGTGTCTTTCCGACCACTACTAGATATCCAAGTAAAAGTTTGTGAAGTATAAC ATAGTAGAAATCTATCAACTACATACATGCCAATAGGAAAGAGTGGTGGGGAGGGGATGGAGAAGAGAGGACGGGTATAT AAATTAAAACCCGTGCCCTAGCCTCCTGGGGAACCACACACATTTTTTTTGTGTTTCTCGTAATGCTAATTATAATTTTG ATTCCCTCAAATAACAGTATTTCCTGTGACTTCTTGAATTTTCTTACATGCTTGATTTATCAACAAGAAAAAGGACTCCA TAGTCCCATAGCATTTTAAACTTGGTGGATATATTAATAAGTTTTTTCCTCCCTTTCCATTTCAACAGGTTTCTGCATGA CAAGGTTAAGCCGCAAGTTGTGCACCGAGACATACGTGCTAGTAATGTTCTGCTGGATGAGGAGTTCGGAGCACACCTCA TGGGTGTCGGTCTGTCCAAGTTTGTGCCATATGAAGCGATGCACGAGAGGACTGTGATGGCAGGTGGAACCTATGGATAT CTGGCTCCAGAGTTTGTGTACAGAAACGAGCTCACAACGAAGAGTGATGTTTATAGTTTTGGTGTCCTGCTACTTGAAAT AGTGAGTGGACGTAGACCTGCACAGGCAGTTGATTCTGTGGGATGGCAGAGCATATTTGAATGGGCCACGCCTCTGGTGC AAGCTCATCGCTACCATGAACTCCTCGATCCTCATATATCTTCCTCGTCTTCTAGTATCATCCCGGAGGCTAGTACCATC CAGAAGGTGGTTGACCTTGTTTATTCATGCACGCAGCATGTCCCTTCAATGCGCCCTAGAATGTCACATGTTGTTCATCA GCTACAACAGTTTGTCCAGCCACCTACAAAGTGA
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0221700.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTGGTCTGATAATTCTCAGTGGAATAAGTCCATGTTTCCTTTGGTCAATTGTACTGGAACTGGACTATCTTGTCATGT AAACAGCACATACAATTTATGTACAGTGGTGACTAATAACTCAAAATCTCTCATTAGTGAGAGGTGTGACAATCCTCATG CTTCTCTATGCATACTGGAAATAGATACCAAATGTAAACATATGCACTGCCACAGGGAATACCTTATCATCCTTGCAGTG GTGAGTGCATTGATACTCTCCACAACATTAGCAGTGGTACTTTGGCTTCTTTTATGTAAACGGGGCAAGAAGAGACGACG GTCTAGAAAACTATCTGATCCAGCTTCTCTTCCATCATGGAAAGTCTTTACCAAAGAGGAATTGAGGTCAATTACTAAGA ATTTCAGTGAAGGTAACCGTCTTGTCGGGGATACGAAGACTGGTGGTACATACAGTGGGGTCCAACCAGATGGCTCAAAG GTTGCAGTTAAGAGAATAAAGAGGTCAAGCTTTCAGAGGAAAAAGGAGTTCTATTCTGAAATAAACAGGGTTGCAAGGCT TCGTCATCCAAATCTGGTGACTGTAGTGGGGTGCTGCTATGGTCATGGTGACCGCTACATTGTTTACGAGTTTGTAGCCA ATGGACCCTTAGATAAATGGCTGCATCACATACCAAGAGGAGGTCGCAGCTTAGATTGGGCTATGAGGATGAAAATTGCA ACAACACTTGCTCAAGGAATTGCGTTTCTGCATGACAAGGTTAAGCCGCAAGTTGTGCACCGAGACATACGTGCTAGTAA TGTTCTGCTGGATGAGGAGTTCGGAGCACACCTCATGGGTGTCGGTCTGTCCAAGTTTGTGCCATATGAAGCGATGCACG AGAGGACTGTGATGGCAGGTGGAACCTATGGATATCTGGCTCCAGAGTTTGTGTACAGAAACGAGCTCACAACGAAGAGT GATGTTTATAGTTTTGGTGTCCTGCTACTTGAAATAGTGAGTGGACGTAGACCTGCACAGGCAGTTGATTCTGTGGGATG GCAGAGCATATTTGAATGGGCCACGCCTCTGGTGCAAGCTCATCGCTACCATGAACTCCTCGATCCTCATATATCTTCCT CGTCTTCTAGTATCATCCCGGAGGCTAGTACCATCCAGAAGGTGGTTGACCTTGTTTATTCATGCACGCAGCATGTCCCT TCAATGCGCCCTAGAATGTCACATGTTGTTCATCAGCTACAACAGTTTGTCCAGCCACCTACAAAGTGA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0221700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MWSDNSQWNKSMFPLVNCTGTGLSCHVNSTYNLCTVVTNNSKSLISERCDNPHASLCILEIDTKCKHMHCHREYLIILAV VSALILSTTLAVVLWLLLCKRGKKRRRSRKLSDPASLPSWKVFTKEELRSITKNFSEGNRLVGDTKTGGTYSGVQPDGSK VAVKRIKRSSFQRKKEFYSEINRVARLRHPNLVTVVGCCYGHGDRYIVYEFVANGPLDKWLHHIPRGGRSLDWAMRMKIA TTLAQGIAFLHDKVKPQVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPYEAMHERTVMAGGTYGYLAPEFVYRNELTTKS DVYSFGVLLLEIVSGRRPAQAVDSVGWQSIFEWATPLVQAHRYHELLDPHISSSSSSIIPEASTIQKVVDLVYSCTQHVP SMRPRMSHVVHQLQQFVQPPTK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
NON_CYTOPLASMIC_DOMAIN
1 73 73 - –
PANTHER
PTHR27001
1 416 416 3.8E-158 –
PANTHER
PTHR27001:SF85
1 416 416 3.8E-158 –
TMHMM
TMhelix
74 96 23 - –
Phobius
TRANSMEMBRANE
74 99 26 - –
Phobius
CYTOPLASMIC_DOMAIN
100 422 323 - –
SUPERFAMILY
SSF56112
109 413 305 7.24E-66
IPR011009
Gene3D
G3DSA:3.30.200.20
110 211 102 1.8E-25 –
ProSiteProfiles
PS50011
136 417 282 33.46
IPR000719
SMART
SM00219
141 413 273 3.5E-14
IPR020635
Pfam
PF07714
155 413 259 5.1E-41
IPR001245
Gene3D
G3DSA:1.10.510.10
212 420 209 2.1E-50 –
ProSitePatterns
PS00109
258 270 13 -
IPR008266

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004713
Molecular function Protein tyrosine kinase activity Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0221700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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