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LotjaGi6g1v0224500.1

Overview

Field Value
Gene ID LotjaGi6g1v0224500
Transcript ID LotjaGi6g1v0224500.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Kinase-like protein; TAIR: AT2G05940.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9ZUF4|RIPK_ARATH Serine/threonine-protein kinase RIPK; TrEMBL-Plants: tr|I1MHG2|I1MHG2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0224500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:52955874..52958897) extracted from Lotus japonicus Gifu genome v1.2.

CTGAGATTATTAACTTTCGTGGAAGTTTTTCATATATGAATCTAAAACATTACATGAATTAAGCATGTACCATTTGAGTA AACCGCTTAATCAATTAAGTACAAGAACTACACGGTTTTTAGGAAATAGATAACTAGTAATGAAAAAGAAAATGGGTGGA AAATTCAACGTGGGGCTGATATAAAAGGTGCTGAATATCTCTTTTCTTTGTAAGCAGTTGAAGATTTTGAATATCAGTTC TCTACCTTCACTTTTGAAAGTCTTAAACCCATTTTCATTTCCTCGAACCTCTCTCTCTCTCTCTTCCTACCTAATACCTA CATAGTCTCACCAAGTTTTCCAAGCTTTCTCAAGTATATATATATTAATACAAGGACCATAGCTGCAAAACCAGAACAAG TTTGGATTTGTTTCAACAATGGCAATCATGAAAGTTATATGGAAAGCGATCTTCCCAGGTTGTTACAAGGGTGGTTATCC CTCAACCAAGCCCAAGAAAGTGGTGGCCACAAAGCCACCAAGTTCATCTCACAGCAGGATTTCTGTAACTGATTTGAGCA ACCCTGGAAGCACCACTTTTACAGAGGATCTCTCAATTTCTCTAGCAGGAACTAACATTCATGCTTTCACTGTGGCTGAG CTCAAAGTTATCACACAGCACTTTTCTTCTAGCAATTTCCTAGGAGAAGGTGGATTTGGACCAGTGCATAAGGGTTTCAT TGATGACAAGCTTAGGCCTGGTCTCATCAAGGCTCAACCAGTTGCTGTAAAGCTCTTGGACTTGGATGGCAAACAAGGCC ATAAAGAGTGGCTGGTACTTACTTTTTCCAATGATTCTCTTAATGGAACTTTTTTTTTTTGGTAATGAGAGCCTTTGAAT TCTAACTCTCTTTTGATTTTTCTTGTGTGAACAGGCTGAAGTTGTTTTTCTGGGGCAATTCAGGCATCCACACCTTGTGA AGCTAATTGGATACTGCATTGAAGATGAACACAGGCTTCTAGTGTATGAGTATTTGCCAAGAGGGAGCTTAGAGAATCAA TTATTTAGAAGTAAGAATTCTGTTATAATAATAGTAATCAATGATTAATTGTGTTTTACCAATCTGCTTAATTGGAACAT GAATTAAAACTGATCACCTTTTTGTTGGAATTCCAGGATACTCAGCATCTCTGCCTTGGTCAACAAGAATGAAAATTGCT GTTGGAGCTGCAAAGGGTCTAGCTTTTCTTCATGATGCAGAGAAACCAGTCATCTACAGAGATTTCAAAGCTTCCAACAT CTTGTTAGACTCTGTATGTATCTGATCTCACCTTCCTCCTCTACTGTTCCATTCAAAATTAAAAACATCATTCATTTAAG GAAAATTATTCGCGTGAGAAGTAATGAATGTGATATATAACCTGACGTGTTGTGGGGTGTCTAACATGTTTAAATATGTG TAATTAACTTACTACTTATACTGACTTTTTCTCATTTGTTGTTGTTCTTCCAGGATTTCAATGCAAAACTATCAGATTTT GGGTTGGCAAAAGATGGTCCAGAAGGAGATGACACCCACGTTTCAACCAGGGTCATGGGCACCCAAGGCTATTGTGCCCC AGAATATGTCATGACAGGTAAATTCAATCTTTCTAAATCTCTGATTATACTAACAATCTCAACAACCACAGAAAATGATT TAACAAAAAATCATTGCAACTAGATCACTTTAACCAATCTTTAATATTTTTTCTTCTCACAGGTCATTTGACAGCAATGA GTGACGTGTATAGCTTCGGAGTAGTGCTGTTGGAGCTGTTAACAGGAAGAAGGTCAGTGGACAAGAACCGTCCTGCAAGG GAGCAGAACCTTGTGGATTGGGCAAGGCCCATGTTGCATGATTCAAGGAAGCTTAGCAGGATCATGGACCCTAGGCTTGA AGGGCAATACTCTGAGATGGGAGCTAAAAAAGCAGCAGCACTGGCTTATGACTGCCTCAGCCATAGGCCCAAGAGTAGGC CCACAATGAGCACAGTGGTTAAGGCTCTTGAACCCCTTCAGGATTTTGATGACATTCCAATGGGACCCTTTGTGTACACA GTTCCAGCTGATAAAAGTGAAGTGCTTAAAGAAGGGAAGGATTTTGAATCACCTAGGGACAGGAAGAGGAGTCCCCATCC AAACAGAGGACATAGGCCTCATCCACTTAAATCCCCAAAGTCATCACCAAAGCCATCACCAAGGCCATCACCAAGGCCAC AGTCACAAACTGATAGACATAGAAATGGGAGAGGAAGTGGATCAAATTCTCCTCCTGATCATCAGAAAGGCAAGGAAAGG TAGAACATGTTTGGAAATCTTTCTGTAATTGATTCGAAAGTCAAGATCAATGCAGGGGAGAAACTTCGCTGAATAGCTTC TAAGTGTACCAGAATTGATTATGAGGAAAAGAACGGCTGCTGATAAGTTTGATAGGACACATACATAGTACTGTACATAG ATATTTGCTATAAAATGCATGGTTTTTTTATTTAGTGTACCAACTACTAGCTAGCCTAGGTGAGTGGAATGAGGCTTGAG CCATCAAGCAAAAGGAAAAAACAGACAGAGACAAAAGAAAAAGGAGGGTAGGCGTGCAAGTGTGATGGTCCTCTTTTGTT TTATTTTTGTTTTTGGATACTCTTCAATTGAAGAAGGAGGTTAATTTTTAGTATAATTTGTGTATACATACGATTATAGA TTTTGCTTGTTGATGAATTACAATTAGTGGCAATTACCGGCTATGATTTGATACTCTTCAATGAAGGGAGATAGTCAGTG ATTATAATTTTTGTATAGTGTATACACACGATTGTAGATTATGCTTCTTGATGAATCAAAAGACTGGTCCAATTAGTGGA CAATTACCAGCTACGATTTGTTGAACAAATTTTTGAAGTGTTTTCATACCAAGGATTACAGCTACAAGCCTACAAGATTT GACCAGACAACACGTAATATATAGAATAGGGAGCAACTTGCTATATATATATATATACATACAC
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0224500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCAATCATGAAAGTTATATGGAAAGCGATCTTCCCAGGTTGTTACAAGGGTGGTTATCCCTCAACCAAGCCCAAGAA AGTGGTGGCCACAAAGCCACCAAGTTCATCTCACAGCAGGATTTCTGTAACTGATTTGAGCAACCCTGGAAGCACCACTT TTACAGAGGATCTCTCAATTTCTCTAGCAGGAACTAACATTCATGCTTTCACTGTGGCTGAGCTCAAAGTTATCACACAG CACTTTTCTTCTAGCAATTTCCTAGGAGAAGGTGGATTTGGACCAGTGCATAAGGGTTTCATTGATGACAAGCTTAGGCC TGGTCTCATCAAGGCTCAACCAGTTGCTGTAAAGCTCTTGGACTTGGATGGCAAACAAGGCCATAAAGAGTGGCTGGCTG AAGTTGTTTTTCTGGGGCAATTCAGGCATCCACACCTTGTGAAGCTAATTGGATACTGCATTGAAGATGAACACAGGCTT CTAGTGTATGAGTATTTGCCAAGAGGGAGCTTAGAGAATCAATTATTTAGAAGATACTCAGCATCTCTGCCTTGGTCAAC AAGAATGAAAATTGCTGTTGGAGCTGCAAAGGGTCTAGCTTTTCTTCATGATGCAGAGAAACCAGTCATCTACAGAGATT TCAAAGCTTCCAACATCTTGTTAGACTCTGATTTCAATGCAAAACTATCAGATTTTGGGTTGGCAAAAGATGGTCCAGAA GGAGATGACACCCACGTTTCAACCAGGGTCATGGGCACCCAAGGCTATTGTGCCCCAGAATATGTCATGACAGGTCATTT GACAGCAATGAGTGACGTGTATAGCTTCGGAGTAGTGCTGTTGGAGCTGTTAACAGGAAGAAGGTCAGTGGACAAGAACC GTCCTGCAAGGGAGCAGAACCTTGTGGATTGGGCAAGGCCCATGTTGCATGATTCAAGGAAGCTTAGCAGGATCATGGAC CCTAGGCTTGAAGGGCAATACTCTGAGATGGGAGCTAAAAAAGCAGCAGCACTGGCTTATGACTGCCTCAGCCATAGGCC CAAGAGTAGGCCCACAATGAGCACAGTGGTTAAGGCTCTTGAACCCCTTCAGGATTTTGATGACATTCCAATGGGACCCT TTGTGTACACAGTTCCAGCTGATAAAAGTGAAGTGCTTAAAGAAGGGAAGGATTTTGAATCACCTAGGGACAGGAAGAGG AGTCCCCATCCAAACAGAGGACATAGGCCTCATCCACTTAAATCCCCAAAGTCATCACCAAAGCCATCACCAAGGCCATC ACCAAGGCCACAGTCACAAACTGATAGACATAGAAATGGGAGAGGAAGTGGATCAAATTCTCCTCCTGATCATCAGAAAG GCAAGGAAAGGTAG
Download CDS Sequence

Protein sequence (LotjaGi6g1v0224500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAIMKVIWKAIFPGCYKGGYPSTKPKKVVATKPPSSSHSRISVTDLSNPGSTTFTEDLSISLAGTNIHAFTVAELKVITQ HFSSSNFLGEGGFGPVHKGFIDDKLRPGLIKAQPVAVKLLDLDGKQGHKEWLAEVVFLGQFRHPHLVKLIGYCIEDEHRL LVYEYLPRGSLENQLFRRYSASLPWSTRMKIAVGAAKGLAFLHDAEKPVIYRDFKASNILLDSDFNAKLSDFGLAKDGPE GDDTHVSTRVMGTQGYCAPEYVMTGHLTAMSDVYSFGVVLLELLTGRRSVDKNRPAREQNLVDWARPMLHDSRKLSRIMD PRLEGQYSEMGAKKAAALAYDCLSHRPKSRPTMSTVVKALEPLQDFDDIPMGPFVYTVPADKSEVLKEGKDFESPRDRKR SPHPNRGHRPHPLKSPKSSPKPSPRPSPRPQSQTDRHRNGRGSGSNSPPDHQKGKER
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45621
6 408 403 3.4E-228 –
PANTHER
PTHR45621:SF107
6 408 403 3.4E-228 –
Gene3D
G3DSA:3.30.200.20
47 165 119 3.6E-31 –
SUPERFAMILY
SSF56112
57 361 305 1.78E-79
IPR011009
ProSiteProfiles
PS50011
82 364 283 37.587
IPR000719
Pfam
PF07714
86 360 275 9.1E-46
IPR001245
CDD
cd14066
88 363 276 4.25008E-91 –
Gene3D
G3DSA:1.10.510.10
166 369 204 2.9E-61 –
ProSitePatterns
PS00108
209 221 13 -
IPR008271
MobiDBLite
mobidb-lite
386 457 72 - –
MobiDBLite
mobidb-lite
386 400 15 - –
MobiDBLite
mobidb-lite
401 415 15 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0224500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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