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LotjaGi6g1v0232700.2

Overview

Field Value
Gene ID LotjaGi6g1v0232700
Transcript ID LotjaGi6g1v0232700.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT1G56130.1 Leucine-rich repeat transmembrane protein kinase; Swiss-Prot: sp|C0LGH3|Y5614_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56140; TrEMBL-Plants: tr|A0A072VH51|A0A072VH51_MEDTR Receptor-like kinase; Found in the gene: LotjaGi6g1v0232700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:54162655..54166621) extracted from Lotus japonicus Gifu genome v1.2.

GTGATGGTCATGATCGGAGACAAGTTTGATCGACATGAGGCGATCGAGTTCATTCTCAGAACAGTAGCCGCCTAACTCGA CATTCAGTAATGGATGCCAAGAGATATGAAAGTGGTCGAATCTAACTACAAAAACACCATGGTATTAAGGTTGTTAGTCC GGTGGATTTACTAAATTAATGCCTATCAAATCTGATTTTGAGGCGGCAATTCGGCTTCTTAACCAATTCTACCCGTCCTA GTGATTTTCTGGTGAAAGAAATTAACATATTTACTGTGAATTGTCTGGATATACACTAATACATGTGTATAGGGAAGCAA TTTAGCAGTTAAACTTATAGCGAATGTTTCACAGCTAAACCGCAGCTATTCCCAAGTTAATTCCCAGCTGATCGCAGTCA TTTCACGGCTAATGTTGCGTCTTCTTCTGGTTCTTATCCCCAACCAAGTGGTAGCAGGAAGGAATGACCGACGGAAGCAT TGATGGAAAACGAAGAAGACTAGGAGTAGGCGAAACAGAGATATGGGTTCTCACTTCTCACAATTTGGCTGCATGCTGCA TCATCAGCTGGCAAAACAGCAAGCAGTGGCGGTTTTTTGAACTCTCACTCAATCTCATAATTAATAATTAATTACTGCTT GAAATTCATACTCTAATATATTTGGATTTTTCTTGTATTCGACCAAATGATTCCTCCAATTGCATTCACCGACGACATTA CCTTGTTACTTTCGATCTCTTCTAAGGGACACCCTTAGATTACTTCTCCCTCTATTTTTCAATCTTTTTCTAATCACAAC GTACAACAAATAAGGACAAATAAAGACCAAACCAATTATACAAGTTAGTTAATTACCCCTTCATCTTTCTTCAAGGCTGC AGTGCCTGAACCCCAACAAGAAAGCTCGTTTTCCACCCTAAGGATGCCTAGCAGAGTACTTCAAGGTTTGTTTCCTGTTA GTACCATTGTTTTGAGTGCTTCAATATGCTACAGAGGATTATTTAGTAGCATTTGGTTCAATTTATGTCACTATATATAT GTACTTGTGAAGATCAAGGCATTGATAAAGGAATATATACAACACACAAAAAATGCACTTTTTTAAATTAAGGTTCCAAT TAAGGAATTGCGGACAAATGCGAGTTGATGCGACAACAGTTGTGGTAACGATGCTGGTGCAGAAACTTTCAAATCCCTTT ACGCGGCAATTGTGTTTGTGGACTGCAACTTAATTTCCTTTCTCATAGCCCAAGATGTATCATTTAAATTTTATCTAAGT TTTGAAAATTTAAAAGATGTTTGATAAAGTTTGTGAAATAACTACTGCAGGGGAAGCTCCTTTACCCTCTAAGGAATCAC AGATTCCCTCGTCCAGGTACAAACATGAAACATTGTTCTTCGTCCTTGGAGGGATAGTAGTGGTTGCCATATTGTTTATT CTCTGGTTTGTGTTTCGGAAGCGTATCAAACAGCCAACAAAGCCAAAGGGAAAGACAGCTCCAAGTAAAGAGCACAAAGG TAGTTCATCAAAGCAGAGTTTGTAATTACTAGTTTTATTTTGAAGGATGTTTGTGGTGCTTATAACATATATTTATGTTT TTGGTGCTTGTGTTTGGTGAACATGTTGAACTTGCAGAGGTGATGAAAATGGTATTTCCATCCAAACAGCAATCAGGTAA TTAAAGGAAAAAGCATAACAGAATCTGATATGCAATGGTATATCATTCACAATCCTCTGAATCTATTTGGTGTCCCCTTC CTTGTGTCATTGATCAAATTATGTCATGTTTATTGTAAAAAATCATGTTTATGGAAGTTATAACCTTACATGTGTAATTT TCAGAGACATGATACAATTTGATTGGTGCGGCACAAAATGAGACATCAAATGAGCACAGAAGATTTCATTCTCATTAAGA CCTAAATATTAAAGTTTCAATTAATATACACAGGGTCCAAGTCCATGTCCATGGAATTCTTTAGTGGAAATCTTCAGTCA ATTTGCTTCTTTGACTACCAAACATTGAGGAAAGCAACCCACAATTTTTTTCCTGGTAATCTCCTTGGAAGTGGGGGATA TGGGCCTGTCTACAGGGTAAGCTTGGCTTGATAAAGAATGGGATTTGTAATGAGAAGTTGAGAACCTGATATTGCAAGCT AATTATAAGGTCTTTTTATATGACAAACTTCAAGATGGTAGTAAAAATGGTTAATTTCAACCTTCATGTAGTTTTTGTGG AAAAAACATCAATCTAAATGAGAAATAGGTAGGAAATTGAATAATGTTTTGTGCTTCATAGGAACCAAATCGTTACTACT ATTTTTACAGGGAAAGTTGGTAGATGGGAGGATGATTGCAGTGAAGACATTGTCCCACAACAAATCACAACAGGGAGAAA GAGAATTCCTGGCAGAGGTGAAAATGATCACTAGCATCCAGCACAAAAATCTGGTTCGCCTTCTCGGATGCTGCATCGAT GGACCTCAAAGGATTCTTGTCTATGAATACATGAAAAACAGAAGTTTGGAACTATTTATATATGGTATCCCTTCTTCTTC TTCTTTTTTACCGAATCATAGGCATACACATTTTTCCAGACACCCTTTGACTTAACGGCGGATTTTAACCTCGCAAAGTG GTTTGAAGGGTGTCTAGCAAAATACTAAGTCCGCCAATCATTATTGCATCTTCAAATGCTCCTTTCATTAATGCAGGAAA TGGTGATCAATTTCTGAATTGGAGCACCAGGTTCCAAATTATTCTCGGAGTTGCGCGGGGACTGCAATACCTTCATGAGG ACTCACACCTCAGAATTGTTCACCGAGATATCAAAGCAAGCAACATTCTTCTTGATGACAAGTTTCAGCCAAGGATTGGA GACTTTGGACTAGCTAGGTTTTTCCCTGAGGACCAAGATTACCTTAGCACACAGTTCGCTGGAACATTGTATGTTCTCAT TACTAATTCTACTGAGAATCAATTCTGCTAAGGCCGATGAGGTTTTCAATTGATTATGTTTCTTTTTTTTTTTTTGCCTT TTTGGTCAGAGGTTATACAGCACCTGAATATGCTACTAGAGGAGAACTGTCAGAAAAGGCAGATATCTATAGTTTTGGAG TCCTCTTGCTGGAAATAATCTGCTGCAGGAAAAATACAATTCGTACTTTACCATCAGAAATGCAGTACCTCCCTGAATAT GTAACTTCTCATCTTTCTATTCTACTATGATCTGTTGTTCACATTTCTTAAAATGTGTAATTAATTAGTCCTTCATGATA TATAGGCATGGAAACTGTATGAGAAGTCAAGTATATTGGATATTGTAGATCCAAAGCTGCGACGAGAGCATGGATTCGTA GAAAAGGACGTTATGCAAGCAATCCATGTTGCTTTCTTATGTCTTCAGCCTCATCCACATTTGAGACCCCCCATGTCACA GATCGTAGCTCTGTTAACATTCAAAATCGATATGGTTACAACACCAATGAGGCCAGCTTTCCTCGACCGACGGCGCATAA AGGATGAAGCTGAGATCAACCATTCTTTTGAAATAATATCTGAGGCCACTGATTCAATTTCTATCAGATAAAAGGGTCAT GATGATCCCAGAGAAGGGAAGAGGGAAAGAGGTCTAAAGGATGCTACAGAGTATAGATTTTATTCACTTCACTTTTGTAC ATACTAGTATAGTAGTGTTTTTTACCCGCGCGTTGTACGGGAATACATCTATTATATTTGATAGGTCAATTAATACCTTA ATCATTAAAAATATAATAAACAACTTATAAAATAGAAGAGTATGAAATGATGAGCAAAGTGGACAAAAAGTCTTAAATTA AAACCTTTGTTGCATAGATTAAACTTCGTACAATTGAATAACTAATAAAAAATTAGTTAACCAAATCTCAAATTATGCAA AACATATTAGGGGATGTGGTTTAATGATGGCTAATAAACAATACCTG
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0232700.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCCATGGAATTCTTTAGTGGAAATCTTCAGTCAATTTGCTTCTTTGACTACCAAACATTGAGGAAAGCAACCCACAA TTTTTTTCCTGGTAATCTCCTTGGAAGTGGGGGATATGGGCCTGTCTACAGGGGAAAGTTGGTAGATGGGAGGATGATTG CAGTGAAGACATTGTCCCACAACAAATCACAACAGGGAGAAAGAGAATTCCTGGCAGAGGTGAAAATGATCACTAGCATC CAGCACAAAAATCTGGTTCGCCTTCTCGGATGCTGCATCGATGGACCTCAAAGGATTCTTGTCTATGAATACATGAAAAA CAGAAGTTTGGAACTATTTATATATGGAAATGGTGATCAATTTCTGAATTGGAGCACCAGGTTCCAAATTATTCTCGGAG TTGCGCGGGGACTGCAATACCTTCATGAGGACTCACACCTCAGAATTGTTCACCGAGATATCAAAGCAAGCAACATTCTT CTTGATGACAAGTTTCAGCCAAGGATTGGAGACTTTGGACTAGCTAGGTTTTTCCCTGAGGACCAAGATTACCTTAGCAC ACAGTTCGCTGGAACATTAGGTTATACAGCACCTGAATATGCTACTAGAGGAGAACTGTCAGAAAAGGCAGATATCTATA GTTTTGGAGTCCTCTTGCTGGAAATAATCTGCTGCAGGAAAAATACAATTCGTACTTTACCATCAGAAATGCAGTACCTC CCTGAATATGCATGGAAACTGTATGAGAAGTCAAGTATATTGGATATTGTAGATCCAAAGCTGCGACGAGAGCATGGATT CGTAGAAAAGGACGTTATGCAAGCAATCCATGTTGCTTTCTTATGTCTTCAGCCTCATCCACATTTGAGACCCCCCATGT CACAGATCGTAGCTCTGTTAACATTCAAAATCGATATGGTTACAACACCAATGAGGCCAGCTTTCCTCGACCGACGGCGC ATAAAGGATGAAGCTGAGATCAACCATTCTTTTGAAATAATATCTGAGGCCACTGATTCAATTTCTATCAGATAA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0232700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSMEFFSGNLQSICFFDYQTLRKATHNFFPGNLLGSGGYGPVYRGKLVDGRMIAVKTLSHNKSQQGEREFLAEVKMITSI QHKNLVRLLGCCIDGPQRILVYEYMKNRSLELFIYGNGDQFLNWSTRFQIILGVARGLQYLHEDSHLRIVHRDIKASNIL LDDKFQPRIGDFGLARFFPEDQDYLSTQFAGTLGYTAPEYATRGELSEKADIYSFGVLLLEIICCRKNTIRTLPSEMQYL PEYAWKLYEKSSILDIVDPKLRREHGFVEKDVMQAIHVAFLCLQPHPHLRPPMSQIVALLTFKIDMVTTPMRPAFLDRRR IKDEAEINHSFEIISEATDSISIR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27006
3 340 338 4.6E-186 –
PANTHER
PTHR27006:SF21
3 340 338 4.6E-186 –
Gene3D
G3DSA:3.30.200.20
3 104 102 1.2E-34 –
SUPERFAMILY
SSF56112
9 303 295 1.16E-82
IPR011009
ProSiteProfiles
PS50011
28 302 275 37.757
IPR000719
SMART
SM00220
28 302 275 3.7E-38
IPR000719
Pfam
PF07714
32 299 268 4.4E-48
IPR001245
CDD
cd14066
34 301 268 4.25292E-97 –
Gene3D
G3DSA:1.10.510.10
105 309 205 2.6E-58 –
ProSitePatterns
PS00108
149 161 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0232700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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