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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0239800 |
| Transcript ID | LotjaGi6g1v0239800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pumilio, putative; TAIR: AT3G20250.2 pumilio 5; Swiss-Prot: sp|Q9LJX4|PUM5_ARATH Pumilio homolog 5; TrEMBL-Plants: tr|I1L1B8|I1L1B8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0239800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:55085598..55094945) extracted from Lotus japonicus Gifu genome v1.2.
TTTAAAGACGCAGCTTTTTAGAGAAGAGAAGAAAAAAAATCCCATTCTCTCCCACACAAGAGAAGAGTGCGCATACTTAA ATCAACACCCCCAAACAAAAATCAACGCATCAATTTTCTCAACATCATCACCATCTTCTCTCTCTCTTTCTCTCTCTATC GAAGAATCTAGGGTTTTGGAACAGTGAATCTCCACCGCTTGAGGTTCTTCTGCAAACCAAGGTTCTCGCTTTCTCCCTTT ATATACATGTGCATGCATGGAATTTTCGTGGGTTTGTCTTGTTTTCAGTTTTCACTCTCGGGTTTTGATTCCCCTTTCAA ACTTTATTTGCATAGCGAATTGGTATGTAATGCTTCAATGATGAATTGGTGATGATCGTTGCAGAGGAATTGAGGGGAAG TTCGACCCCTTTTTCCTCTGTTTGGTCAACGAGAAAGATGACAAGTGAAGCAAGCTTGTGTGTTAAGCAGGGTGTGTGTG TTTTTTTCTCTAGTTTTTGTTAAGGGGGTTGGTTCATTTCTGTTGTGATAAGAGAGAATTCCAATTTGTTTGGGATGCTT GATTATGTGGTTGAATTCTGTAGTCACTGTTCTGGAGTTGTGAGAGGCTTAATTTTGCATGGTTTGACTGTATTTGTGTA ATTTATGATGAGTTGAAATTGTTTCTGGGCATGGATTCCAATGGAATTGGAGGATTATGTTATGTCATTTCACATTTACT TTGATAAGTTGTTATGAATTTAATGAACATGGCATTATCATTGTTGATGAATGATAAGTGAACTTTATGTTAATTGGCAC TCGGTTATTGCAAAACTGAATTTTTAGTTTTTTGCATAATGCTTATGCAAATTCATGTGAAGTGTTCAGTTAAATACCTT TTATCACTGCTCACTGTATTAATTGATTGGAGCTATTGTATCTTGAAATTTGCTGATTTACTTTTTCAGTCGAATTTAGC AATACTAATAAGATATATTACCCCATTTGAAGTTTATACTGATCCAACAATTTTGGGTGCAGTTTAGGAGACAATATGAT ATTTCTAGTTGCCATTGCAAAAGAAGGTGCGAACTAATATTCCTGTAGTATGGCAACTGAAAGTCCAATTAGAATCTCAG AAGCTGGGGGTAAGTGGCCGTCTCATAAGGAAGCTGCAACTTTTGGTCAACCATCTCATAACATGGTGACTGAGGATTTG GGTATACTTTTGAAGGGCCATAGGTTCCATGGCAGGGGACACGATGTTGCACCCAATCGCAGTGGCAGTGCACCTCCCAG CATGGAAGGTTCATTTCTGGCCATAGAAAACCTATTACACCAGCAAAACACCACCGAGAATACAAGTTTGACAACGCTAA GCAGAGCTGTGCAAAATTGTGAGTCTGAAGAACAATTACGAGCCAGTCCAGCTTATTTGGCATATTACAGTTCCAATGTC AACCTAAACCCTAGACTTCCTCCCCCGCTTACATCCTGGGAAAATCGCCATCTAGGGCATCATATTGGTAGTTTTAGAGA TAATGGGAGGTTTTCTTCTGATCATGGCAGTAAAAGTTCTCTTTCAACACACAAGGAAGAACCCGAGGATGATTCACCCA AACGGCCATATGAAAGTGAATTAGTTAAAACAACTGGAGTATGGCATAGACCAGGTGCAGCTTCATTGACATCACAGCAC AAAAATGCAGTTGATCTAATTCAGGTGACTATTTTTATATCAACATCTCAGTTTTGTGATATCCATTCAATTTTTCTGCA TATAAATTGCATAGCTAATTACCTAATAATTTCTTATGTTTTAATAGCATATTTAATTATCTATCAAAAAAATTCTCCAT TTATTTTCTCTAGTTTATATTTGTTTTTTGCTTTCTTAGTGGATAGTAATCCCATGATTGTGTTGTACTGTACGTTGTTA AGTGCTTGCCATTTGTTACCTGCAGTAAAAATTTGTAATGTTTGAATGCATAAATTTTTTTTTTGTTTAAAATTCAAACT TTCAGGAAGATTTTCCTCGCACCATGTCACCTGTATATAACAAGTCTCCTTCTGCAAGTCATGGACTGGTGGATAAATCA GTTGACTCAGAAGCCGGTTCTAGCTCTTCTCATGAGGCCTCTAATAGTGCTGTAGATTCTGCCCAACCTACAGCAGATGA AGGTGATATAAGGTTGTCATCAAGTTTTGATACCCATGCCCCAGTCGCAAGCTCATCATCACTTGAATCTACAGCCAGCA TGGGTTTTAGTGACTTGAATGTTGCTACTATTGAGTCTCAACTAAAGGCTCTTAGTGTATCTAATCTACCAAATCCAGAA AGCCTGAGTTATGAAGAAAAATGGAAGACCATCTACCAGAACAATTTGATGCAACGCCAGGTATTCCCGCAACAAAACAA TCCATATGAAGTTCCTAGTGCCAATTCTCAAAGTGTAAACTCTGCCTACGTTGTTAGGGAACAGTTTCCTCAAAATTCAG GCAAGTTCCCAGATGTCCAACCACTACTGCAGTCATCTGGGTTTACACCTCCCCTATATGCCACAGCAGCAGCTTATATG ACCTCAGCAAATCCATTTTATACTAATATGCAGGCCCCAGGCATATATACTCCACAATATGTTGGAGGGTACACTTTAAA TCCTACAGCTATTCCTCAGTATATTACTGCATACCCTCCTCATGGTGCTGTGCCACTTGTTGATGGGGCCTCTAGTTCCA GATACACCCCATTAACACCAGGGGTTTCAACTGGTGGAAGCATTTCACATGGAGCTGAAATGGTACATGCAAACAAGTAC CTTGGGCAATTTGGATATCCTATGCAGCCTTCTTTTGGTGATCCTTATTACATGCAGTATCATCAGCAACCTTTAATGGA GGGATATGGTATTTCTGGTCATTTTGACCCACTGGCACCTAGAGCAAGTGATGCTAGCCAAACTAGTCCGTATGATTCTC AAAAAAGGCCTAGTACTGGTGCTTATTTAGATGATAAAAGAATACTTGATCAAAGAACTGGTGCTAATATTAACTCAAGA AAAGGTGGATCATTGACTCCTAGTTATTTTGGGCATATGCCAAACATGGGTTTTGTAATGCAGTATCCAAATTCCCCACT TCCTAGTCCAGCTTTCTCGGGATATCCAGAAGGAACTCTTGGCCTTCCAGGAGGTAGAAATGAAATGAAACTTTCCCCAG CTTCTGGTAGAAATGGAGGCATATTATCTGGATGGCAAGGTCAGAGGTCCTTTGACAGTGCTCATGACCCCAAAATTGTT AATTTTCTTGAAGAGTTAAAATCTGGCAAAGGTCGTAGATTTGAGCTATCTGATATTATTGGACATATTGTTGAATTTAG GCAAGTAGCCTTTTACAGTTCTCTTCCCACCTATCTAATTGACTGATTTTTTAGCTTTGGAAATTAATTACACTGTGGCT TTTCCCTCCAGCGCTGATCAGCATGGGAGTCGATTTATACAGCAGAAGTTGGAAACTTGTGGTGTTGAAGACAAGGCATT GGTGTTCAAAGAGGTTCTCCCACGTGCTTCTAAACTAATGACTGATGTATTTGGTAACTACGTAATACAGAAGGTATGTT TTGGAAGTGAACTATATTGCCATTAAGAGTAACTTACAGTTTGTTTAGACTCCATTGTGCTCTAATTTTTGCCTCTCTCA TGTGCTTAGTTTTTTGAGTATGGAAGCCCTGAGCAGAGGAGGGAACTTGCAGATCAACTGGCTGGTCAGATACTGCCTTT AAGTCTGCAGATGTATGGCTGTCGTGTGATCCAAAAGGTATGTAGGGTGCGTTTGGGAACACAACATCTTAATTAAGCGC TTATGGCAATAAGTACTAATATGCTTATCACATTAGCGCTTACTCATAAGCTTATTTGATAAGCTTATGGAAATAAGCTC AAAATAGCTTATAAGTAGGTATAACTTGTAAGTGCTTATTCATAAATTAATATGGGAAACTTATGAAAATAAGCTCAAAA GAGCTTACAATTAAGTCATAAACTTTTTTCATAAGTTCGCCCAAACACTTCCATAAATCATAAGTGCTTATGCCATAAGA TAATCTCAAATAAGGTCTTCCATAACTGCTTATATGTTTAGAGTATGCATATTTTAGTCTATATGACTTTAATTTCTGTC GTTGAATTAGAGCATTCATAACTCAGCTTTAACAGTGTCCTGCATATCCACACCCTAGTTAGGCTGAGGCATTGGCTAAA ATCCGGTTTGCATTTAATAACTAGTTGCTTATTTTTCTTCCATGGCCAAGACGTTTCCAAGCAATAATCAAACTAGCATG TTTAGATAAACTGATAAAATCATACACACTGCAATGTGTATATAACAATATAAAGAAGCATTGTCGGTTTTTTAGAAGTA AAATGTGTATTTATTGGGAGCTTTGCTGTGGGAAAGAAACATTAGAGTTTAAAGAGCACATGATCAAAGAAAAGGAAATC TCCAATGAGGCTACAATTAGGATCACTAAAGCGAAAAATTGACTCTGATAAACATGTATTTTTAATGGGTTGCTTGGGTT CACCTGCACAATCTGACCCAACACGGAGTTTGGGCCTGAATTCACCCACCTGCACTAAATGATCTAATCAATTACCCCCC GCCCTCCTTGTCATTCCACTTAACTGTTATTATCAAATGATTTAAAATAAAAGTGGAACTGTGTTGTTCCCCTTATATCC TATCGTAATTGGAAACTTGAAATGATGTCATTCCACTTGTTAAAAGAAAAAGATATGACTGACATGAAATGATATTTTTT ACTTGCAGGCACTTGAGGTTATTGATCATGATCAGAAAGCTCAGCTTGTTCGTGAGCTAGATGGAAATGTTATGAGATGT GTTCGTGACCAGAATGGGAACCATGTAATACAAAAGTGCATTGAATCTATTCCAACAAAAAAAATTGGCTTTATTCTATC TGCATTCCATGGTCAAGTTGCTAATCTATCAATGCATCCTTATGGTTGCCGAGTCATACAGGTAAGTTTATGCATTCCCT TCCTGTAAAAGATTTTTTTTTATGTGCTCATGCATTTAATCCGGTGATAATGCTTCTTGTAGAGAGTTCTAGAGCATTGT ACAGATGAGGTTCAGTGTCAGTTTATTGTGGATGAAATCTTGGAATCAGTTTGTGCTCTTGCTCAGGACCAGTATGGTAA TTATGTTACCCAGGTTAATCACTGGCTCTCTTTCTATATCATGTTTGATTATTATCATCTGGTACATAATACCATACTGC ATAACTATGGACAATAGCTGCATTGCAGAATTAGCCAGGCTTATGGTTTCACTTTCTATTCTACTTCCCGTTTCTCTTAA ATTTTCTGTTTGCGAAATCACTTTTCAAGACCTCTGTTCCTAAATTAAATCATTAGGTTTCCATATTCTTTTCTAGTTTG ATTTTTTATATAAAAAAGTTAAAGTCATTGGTGGCAAAGCATTACATAGTTAGAGTTTATGTCTGAGTGTGTCTATCTTA TAGATGAAGGGAAGTTAGAGGTCATCTACCCCCCCCCCCCCCTTCCTTGCATTTTCATGTGAGAATACTTTTGCTTTTTA TTCTCTCTCTCTCTCTCTATACATACATACATACATATGTACATATATACACATACGTACATACATACATATATTTACAC TTGAACTGATGTTGATTAAGAACCTGTTTGGATAAACCTTTTTCATAAAAAGACCACCGTTTGTAAAAAAGTGACTCATA AAATTTAGGGTGTTACTTAAACTTAAGTTACTTTGAGTAGCTTATAAGATAACTATTACTATAGTTACAACTATCTTTTA GACTAGAAAGTGCTTTTTGTAATTATAACATGCAAAATAGCTTCCTCCTTACGTAAAATCTCTGAAAATGATTATTTTTT TCATTAGCTTAAACAAACAGGTACATCCAGGGATCACGTGTCTAATGTTTGCACAGTGGCCATTTCATATGCTGACTTAT TTTTTATAGTTTACTAAGCTATATTGCTTCCCTTGTGTCATAACAGCATGTGTTGGAGAGAGGAAAGCCTCAAGAAAGGA GCCAAATTATTGGCAAGCTGTCAGGACATATTGTTCAATTAAGCCAGCATAAGTTTGCTTCGAATGTTGTCGAGAAGTGC TTGGTGTATGGTGATGTCCCAGAGCGGGAATCGTTGATTGCAGAGATTATTGGACAGGATGAGCAAAATAATAATTTATT GGTAAGTTTAAACTTAGTAAGACTAATTGTTCTTCAGAATATCATAGTTGTTCCATATAAAGAAAGAACTCTTTATTCCA CTGGCTTATTTGGTGTTGATGGATCTCTGAAATATGTTCTGCTAATTAATTTGGTATGATTGACAATTTTTTTATGACTT TGGCCTTTCTTGGAGGTGTAAAATCACATTTTCTTGTGATAAAATATATGTGCATTGGTTTATATTGTAGATTGCATTTC TAGTATTGACTTTGAAAGTTGCCAAACACTCCTTAGGGTCTATTTTTCAGACTGATTATATGTTGATATCATTGACCCTT CCCTGTCTGATGTGAGGTCTTCTAAATCATCAGAGGTTGAAATTTTTTAGCATTAGATGTGATGGTTAAAGTTTGATGCA TTCAATTTGGGTTCTTGCTTACTAGATTGTATTTTCATTATCATTGTAGACAATGATGAAAGACCAATTTGCGAACTATG TGGTCCAGAAAGTTATTGATCTCTGTTCAGAAAATCAACGAGCAACGTTGCTTTCTCACATAAGAGTTCATGCTCAGGCT TTGAAGAAATACACTTATGGAAAACACATCGTGGCTCGGTTGGAACAGCAATTTGAAGGTGTGTACTCCTTCTAGTATTT TGGTTGATAAAGTATATATATTGATTAGGGAGGTGATTTCTCCTACAATATTGTTTTTTATGCGTTGAGGAATTGAATCA TGGTCTCATCTACTCATGTTATGCTTATGCCATATGATATGAGTACTAGTGTTATGTATAAAGAGAGTGAGGCATCTTAA AAGAGGGTGAGGGGACCGAGCCGAGTTTTATTCTACCTTTCAACTTAAAGGGATTATGCTGATGTTGATTTAGTGGCAGA AGATAGTCAGTCGTCTTCTTAGTTCAAAGAAAATTGCAAGATTGGGTGTTGAGTTGGATTCTTTTCACAAGTTGTAGTTG GGTCACTTTGGGAAATTGAGGAGCCATTTGTCTAAGCTTTTTAAAAAGTGATTTTAAGGTGTTGTGATAGAATAATTTAC TTAAGTTATATTTACATGAAGCAAAACTACTTTTAATGTGGTTACAATTATAAAAAGCACTTATTTTATGGGATGGAGAT ATTTTATGGAAGCTAATGTAATCTAACACAAGCTACTTCTTGGTCTGAAGTCTGAACACATCAACCATGTCTCTAAAATA AAAATAATAATAAACAAGAATGCTGCGTGGAATTGAAGCAAACACCTGGTACAATCCTGTTTTATGTCTTCATCTTATAA TTGATTTTTGTATGCAGAGGATCAATCACCCAGTTCATGATGATAATACAGAGGAAACACTTATGTCCCAAGCAGTGCTG CTGTGTCATGCAAACCCCATTAGCTTGAGAATATGTTCTGATTGCTGATCACAGGAAATAGCTGGGACACTGATCTCTAT GCCTGCTTATGCATAAACCGTTGATAGCATCCACCTTGATTGCTTCAAGAGACATTACTATGTACATCTATACTTGGAAA CTTAATGTAATTATGTCATTCAAATAATTGGTTCCAGATGCTGTTTGAGTATAATTATTTGGAAGGGAAACCCTTCCTGA TGTAAAGTTTACTAGAACTTTATTGCTTAGTGTGTGCTTTTCTTTGACATACTAGTAATCAAGGATTGATGAACTAAATT AGTCATTGCCGCATGTAAACCTGGTCCCTGATCCTTGTTATGCATGTTTTGTTTTCGAATTATTGTCATTGCAGACAGGT TTAGGTTGATAAGGTTGAACCAGGTTCAGTTAGCTACATGTTTGAGTTTGGATTTTTCCTGTTTGCGAACAAGTGTAACA TGAATTTCCAATTTCAATTTAACTTCATCTAGGTTTTATCAGAGGAAAGTAGTGAAAAAGAAAACTGGAGAAAATAAAGA TAAGTCGCTTGTTTTAGGAAAAATAGAACAAATTATCATTAACATAAAGCCACTATCTCAGATCTTTCCAAACTTCAGCT GCATTCTCAATGTAGACAATGCTTTCTCCAATTGTTTTTGAAATCGAATTCATCAACAATGAATGTACCAGAATGCTGCA ACGCTCCCAAGCCTCATATCTTGGATCAAAACTATTAGGAGCAGGAAGAGATCCATCGAGGGGAAATTTGTATTTGTTCT TAGTCGTCATCGCACGACGCATGGATTGAGGAAAACAGTGTTTCCATTTCATTGATTCATAATTGAAGAATGAATATAGA GTATGGCTAACTAGCTGCTTAACAATCATCATTGTCTCCTTGCTTGAGATAAGGACCTGATGTCTCTTGAGCAATCCTTT TTTCAGCTTCAAATTGGAGAAGTAGTTCTTGTCCAGGGCATCCGGTGTTGTCGGATTTAAATCAGCAAGGGTAGAGGCAG GTCCACCATTGGGGCAAATCAGGCGCAGTGCTTGTAGGTACTTGACATCAAGTGTTGGATCTAGTTTGCATGTTAATAGA ATTAACAACTGATTAGTGATTAGTTATTTATCATGAGATTAGTTACACGGTTTAGTTTAGCAGTTAGTTGTTAAAGTGCT GATACAACATGGTAGTTAGAAATAATAAACATAATCAATTTGTATAAATAGCTTTGTTTAACTAAATACAAGTGAAGAAT TCATTTCTTTCAATTTAATACCTGTGTTATTGAAATTGTATAGGCGACTCGCAAACAAAGAGCATCTGGCATTCAGTGGT GTGGGGGTTGAGGTTGTTAGAATAGTAGAGCTAGTGAAGTACAAAGTTTGGCTTTGGTTGAGAACTCATGATAGGAATTT CATCTCTTCTTTCTATGAATGGGAAAATAATCCTAAGGAATGTATTGCTATGCTGCACTAATGATATCCTTTGCTGCGTT ATTGCCGAGTTGCTTAGGGAGGCAGATTTGTTCTTCTGTACTAAATGGCATAATCCTTCTTCATTATATTTTGCTTTGGT GGAGTTTTAGTTCATGTGTCCAAGAGATGAATTGGTTAGCTTGGCCTTAAATTGGGTGCTATTGCTACTGGTATGTGGAG GTGGAGCTTTTGTGGAGCACAATCAGTGGTTTTTGTATTTATTTTTTGGGGAGACTTTTGGTTTGATA
CDS sequence (LotjaGi6g1v0239800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACTGAAAGTCCAATTAGAATCTCAGAAGCTGGGGGTAAGTGGCCGTCTCATAAGGAAGCTGCAACTTTTGGTCA ACCATCTCATAACATGGTGACTGAGGATTTGGGTATACTTTTGAAGGGCCATAGGTTCCATGGCAGGGGACACGATGTTG CACCCAATCGCAGTGGCAGTGCACCTCCCAGCATGGAAGGTTCATTTCTGGCCATAGAAAACCTATTACACCAGCAAAAC ACCACCGAGAATACAAGTTTGACAACGCTAAGCAGAGCTGTGCAAAATTGTGAGTCTGAAGAACAATTACGAGCCAGTCC AGCTTATTTGGCATATTACAGTTCCAATGTCAACCTAAACCCTAGACTTCCTCCCCCGCTTACATCCTGGGAAAATCGCC ATCTAGGGCATCATATTGGTAGTTTTAGAGATAATGGGAGGTTTTCTTCTGATCATGGCAGTAAAAGTTCTCTTTCAACA CACAAGGAAGAACCCGAGGATGATTCACCCAAACGGCCATATGAAAGTGAATTAGTTAAAACAACTGGAGTATGGCATAG ACCAGGTGCAGCTTCATTGACATCACAGCACAAAAATGCAGTTGATCTAATTCAGGAAGATTTTCCTCGCACCATGTCAC CTGTATATAACAAGTCTCCTTCTGCAAGTCATGGACTGGTGGATAAATCAGTTGACTCAGAAGCCGGTTCTAGCTCTTCT CATGAGGCCTCTAATAGTGCTGTAGATTCTGCCCAACCTACAGCAGATGAAGGTGATATAAGGTTGTCATCAAGTTTTGA TACCCATGCCCCAGTCGCAAGCTCATCATCACTTGAATCTACAGCCAGCATGGGTTTTAGTGACTTGAATGTTGCTACTA TTGAGTCTCAACTAAAGGCTCTTAGTGTATCTAATCTACCAAATCCAGAAAGCCTGAGTTATGAAGAAAAATGGAAGACC ATCTACCAGAACAATTTGATGCAACGCCAGGTATTCCCGCAACAAAACAATCCATATGAAGTTCCTAGTGCCAATTCTCA AAGTGTAAACTCTGCCTACGTTGTTAGGGAACAGTTTCCTCAAAATTCAGGCAAGTTCCCAGATGTCCAACCACTACTGC AGTCATCTGGGTTTACACCTCCCCTATATGCCACAGCAGCAGCTTATATGACCTCAGCAAATCCATTTTATACTAATATG CAGGCCCCAGGCATATATACTCCACAATATGTTGGAGGGTACACTTTAAATCCTACAGCTATTCCTCAGTATATTACTGC ATACCCTCCTCATGGTGCTGTGCCACTTGTTGATGGGGCCTCTAGTTCCAGATACACCCCATTAACACCAGGGGTTTCAA CTGGTGGAAGCATTTCACATGGAGCTGAAATGGTACATGCAAACAAGTACCTTGGGCAATTTGGATATCCTATGCAGCCT TCTTTTGGTGATCCTTATTACATGCAGTATCATCAGCAACCTTTAATGGAGGGATATGGTATTTCTGGTCATTTTGACCC ACTGGCACCTAGAGCAAGTGATGCTAGCCAAACTAGTCCGTATGATTCTCAAAAAAGGCCTAGTACTGGTGCTTATTTAG ATGATAAAAGAATACTTGATCAAAGAACTGGTGCTAATATTAACTCAAGAAAAGGTGGATCATTGACTCCTAGTTATTTT GGGCATATGCCAAACATGGGTTTTGTAATGCAGTATCCAAATTCCCCACTTCCTAGTCCAGCTTTCTCGGGATATCCAGA AGGAACTCTTGGCCTTCCAGGAGGTAGAAATGAAATGAAACTTTCCCCAGCTTCTGGTAGAAATGGAGGCATATTATCTG GATGGCAAGGTCAGAGGTCCTTTGACAGTGCTCATGACCCCAAAATTGTTAATTTTCTTGAAGAGTTAAAATCTGGCAAA GGTCGTAGATTTGAGCTATCTGATATTATTGGACATATTGTTGAATTTAGCGCTGATCAGCATGGGAGTCGATTTATACA GCAGAAGTTGGAAACTTGTGGTGTTGAAGACAAGGCATTGGTGTTCAAAGAGGTTCTCCCACGTGCTTCTAAACTAATGA CTGATGTATTTGGTAACTACGTAATACAGAAGTTTTTTGAGTATGGAAGCCCTGAGCAGAGGAGGGAACTTGCAGATCAA CTGGCTGGTCAGATACTGCCTTTAAGTCTGCAGATGTATGGCTGTCGTGTGATCCAAAAGGCACTTGAGGTTATTGATCA TGATCAGAAAGCTCAGCTTGTTCGTGAGCTAGATGGAAATGTTATGAGATGTGTTCGTGACCAGAATGGGAACCATGTAA TACAAAAGTGCATTGAATCTATTCCAACAAAAAAAATTGGCTTTATTCTATCTGCATTCCATGGTCAAGTTGCTAATCTA TCAATGCATCCTTATGGTTGCCGAGTCATACAGAGAGTTCTAGAGCATTGTACAGATGAGGTTCAGTGTCAGTTTATTGT GGATGAAATCTTGGAATCAGTTTGTGCTCTTGCTCAGGACCAGTATGGTAATTATGTTACCCAGCATGTGTTGGAGAGAG GAAAGCCTCAAGAAAGGAGCCAAATTATTGGCAAGCTGTCAGGACATATTGTTCAATTAAGCCAGCATAAGTTTGCTTCG AATGTTGTCGAGAAGTGCTTGGTGTATGGTGATGTCCCAGAGCGGGAATCGTTGATTGCAGAGATTATTGGACAGGATGA GCAAAATAATAATTTATTGACAATGATGAAAGACCAATTTGCGAACTATGTGGTCCAGAAAGTTATTGATCTCTGTTCAG AAAATCAACGAGCAACGTTGCTTTCTCACATAAGAGTTCATGCTCAGGCTTTGAAGAAATACACTTATGGAAAACACATC GTGGCTCGGTTGGAACAGCAATTTGAAGAGGATCAATCACCCAGTTCATGA
Protein sequence (LotjaGi6g1v0239800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATESPIRISEAGGKWPSHKEAATFGQPSHNMVTEDLGILLKGHRFHGRGHDVAPNRSGSAPPSMEGSFLAIENLLHQQN TTENTSLTTLSRAVQNCESEEQLRASPAYLAYYSSNVNLNPRLPPPLTSWENRHLGHHIGSFRDNGRFSSDHGSKSSLST HKEEPEDDSPKRPYESELVKTTGVWHRPGAASLTSQHKNAVDLIQEDFPRTMSPVYNKSPSASHGLVDKSVDSEAGSSSS HEASNSAVDSAQPTADEGDIRLSSSFDTHAPVASSSSLESTASMGFSDLNVATIESQLKALSVSNLPNPESLSYEEKWKT IYQNNLMQRQVFPQQNNPYEVPSANSQSVNSAYVVREQFPQNSGKFPDVQPLLQSSGFTPPLYATAAAYMTSANPFYTNM QAPGIYTPQYVGGYTLNPTAIPQYITAYPPHGAVPLVDGASSSRYTPLTPGVSTGGSISHGAEMVHANKYLGQFGYPMQP SFGDPYYMQYHQQPLMEGYGISGHFDPLAPRASDASQTSPYDSQKRPSTGAYLDDKRILDQRTGANINSRKGGSLTPSYF GHMPNMGFVMQYPNSPLPSPAFSGYPEGTLGLPGGRNEMKLSPASGRNGGILSGWQGQRSFDSAHDPKIVNFLEELKSGK GRRFELSDIIGHIVEFSADQHGSRFIQQKLETCGVEDKALVFKEVLPRASKLMTDVFGNYVIQKFFEYGSPEQRRELADQ LAGQILPLSLQMYGCRVIQKALEVIDHDQKAQLVRELDGNVMRCVRDQNGNHVIQKCIESIPTKKIGFILSAFHGQVANL SMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCALAQDQYGNYVTQHVLERGKPQERSQIIGKLSGHIVQLSQHKFAS NVVEKCLVYGDVPERESLIAEIIGQDEQNNNLLTMMKDQFANYVVQKVIDLCSENQRATLLSHIRVHAQALKKYTYGKHI VARLEQQFEEDQSPSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 25 | 25 | - | – | |
| PANTHER | 37 | 969 | 933 | 0.0 | – | |
| PANTHER | 37 | 969 | 933 | 0.0 | – | |
| MobiDBLite | 141 | 174 | 34 | - | – | |
| MobiDBLite | 212 | 262 | 51 | - | – | |
| MobiDBLite | 507 | 534 | 28 | - | – | |
| MobiDBLite | 512 | 526 | 15 | - | – | |
| ProSiteProfiles | 628 | 968 | 341 | 130.438 | ||
| Gene3D | 629 | 974 | 346 | 2.4E-138 | ||
| SUPERFAMILY | 633 | 965 | 333 | 1.9E-114 | ||
| CDD | 643 | 964 | 322 | 6.59213E-167 | ||
| ProSiteProfiles | 648 | 683 | 36 | 9.807 | ||
| SMART | 648 | 683 | 36 | 7.1E-5 | ||
| Pfam | 649 | 678 | 30 | 7.1E-6 | ||
| ProSiteProfiles | 684 | 719 | 36 | 10.95 | ||
| SMART | 684 | 719 | 36 | 8.2E-8 | ||
| Pfam | 686 | 716 | 31 | 6.7E-8 | ||
| SMART | 720 | 755 | 36 | 5.3E-6 | ||
| ProSiteProfiles | 720 | 755 | 36 | 10.95 | ||
| Pfam | 723 | 750 | 28 | 1.8E-4 | ||
| ProSiteProfiles | 756 | 791 | 36 | 9.504 | ||
| SMART | 756 | 791 | 36 | 9.9E-6 | ||
| Pfam | 764 | 790 | 27 | 8.4E-6 | ||
| ProSiteProfiles | 792 | 828 | 37 | 10.95 | ||
| SMART | 792 | 828 | 37 | 5.5E-8 | ||
| Pfam | 797 | 827 | 31 | 1.8E-6 | ||
| ProSiteProfiles | 829 | 864 | 36 | 11.207 | ||
| SMART | 829 | 864 | 36 | 1.2E-5 | ||
| Pfam | 830 | 863 | 34 | 1.4E-5 | ||
| Pfam | 865 | 898 | 34 | 1.4E-7 | ||
| SMART | 865 | 900 | 36 | 1.9E-7 | ||
| ProSiteProfiles | 865 | 900 | 36 | 9.737 | ||
| ProSiteProfiles | 901 | 942 | 42 | 10.74 | ||
| SMART | 907 | 942 | 36 | 1.7E-8 | ||
| Pfam | 910 | 937 | 28 | 9.7E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
Expression pattern of LotjaGi6g1v0239800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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