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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0241000 |
| Transcript ID | LotjaGi6g1v0241000.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT1G34300.1 lectin protein kinase family protein; Swiss-Prot: sp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300; TrEMBL-Plants: tr|K7LBZ2|K7LBZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0241000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:55272264..55273596) extracted from Lotus japonicus Gifu genome v1.2.
TCGTCAAACTCGGGTGCTGTTGCAGCAGCAGTTGTATTCATCATTGGTAAGATTTCACTTTGTTTTTCATCTTTTGTTCC GTGTCACGAGATTTCTAATTGAGCTCTAACCATTTTTTGCAGTCGGGGTGGCGGCAAAGGTAGCTATTTTAATTTGTGTG TGCAGGAAAAGACATCAGAGTGGTGGTGGTGGAACAGTTATTCCAGACTCACAATTTCTGACCCTCACTATGGATAAATT TCTGAATGACATGGAAAGGGAGAAGCCAATCAGGTTCAGCGGTCAGCAACTAAGGATTGCAACTGATAACTACTCCAACT TGTTGGGTTCAGGAGGTTTTGGAGCAGTTTACAAGGGGATTTTCAGCAACGGGACCATAGTAGCGGTGAAGGTTCTCCGT GGAAGCTCTGCAGACAAGAGAATTGAGGAGCAATTCATGGCAGAAGTGGGAACAATTGGAAGAGTTCATCATTTCAACCT AGTTCGCCTCTATGGATTTTGCTTTGAAAGAAACTTGATAGCACTGGTTTATGAGTACATGGGGAATGGCTCTCTTGACA GGTTTCTGTTTCAGGAAAACAAGAGCAAAATAAGTGTGATTAACTTGCTTCATGAGATTGCAGTTGGGACAGCAAGGGGC ATTGCTTACTTGCATGAAGAGTGCCAGCAGAGGATAATCCACTATGACATAAAACCAGGAAACATTCTCTTGGACAGGAA CTTCAATCCTAAAGTTGCTGATTTTGGTTTGGCCAAGCTTTGCAACAGGGACAATACTCACATCACCATGACCGGAGGAA GGGGGACTCCAGGTTACGCTGCTCCTGAGCTTTGGGCGCCATTTTCTGTAACTCACAAGTGTGATGTTTACAGCTTCGGC ATGCTGTTATTTGAAATTATAGGTAGGAGAAGAAACCATGATGCTAAACTTTCTGAGAGCCAGGAGTGGTTTCCAATGTG GGCTTGGAAAAAATTTGATGCTGGAGAACTTGGGGAGTTAATGATAGTGTGTGGGATAGAGGAGCAAAATAAGGATATAG CAGAAAGAATGGTTAAGGTAGCTCTGTCATGTGTTCAGTATAGGCCAGAAGTAAGGCCTATGATGAGTGTTGTGGTGAAA ATGTTAGAAGGTTCAGATGAAATTCCAAAGCCTTTGAATCCATTTCAGTACTTGATGAATGGGGGGAGTTTGGGTGCTCA TCCAGTCCAAGTGTCACAGACTTATACAACAACTATTTCTTCAGGGTCTTCTGTTTTGGTAAGCGACACCAACATCCTAT GCGCTACTCCTGTTATGAGCAAGTATGAGATTGAATTAGCTACTAGCAAGTGA
CDS sequence (LotjaGi6g1v0241000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATAAATTTCTGAATGACATGGAAAGGGAGAAGCCAATCAGGTTCAGCGGTCAGCAACTAAGGATTGCAACTGATAA CTACTCCAACTTGTTGGGTTCAGGAGGTTTTGGAGCAGTTTACAAGGGGATTTTCAGCAACGGGACCATAGTAGCGGTGA AGGTTCTCCGTGGAAGCTCTGCAGACAAGAGAATTGAGGAGCAATTCATGGCAGAAGTGGGAACAATTGGAAGAGTTCAT CATTTCAACCTAGTTCGCCTCTATGGATTTTGCTTTGAAAGAAACTTGATAGCACTGGTTTATGAGTACATGGGGAATGG CTCTCTTGACAGGTTTCTGTTTCAGGAAAACAAGAGCAAAATAAGTGTGATTAACTTGCTTCATGAGATTGCAGTTGGGA CAGCAAGGGGCATTGCTTACTTGCATGAAGAGTGCCAGCAGAGGATAATCCACTATGACATAAAACCAGGAAACATTCTC TTGGACAGGAACTTCAATCCTAAAGTTGCTGATTTTGGTTTGGCCAAGCTTTGCAACAGGGACAATACTCACATCACCAT GACCGGAGGAAGGGGGACTCCAGGTTACGCTGCTCCTGAGCTTTGGGCGCCATTTTCTGTAACTCACAAGTGTGATGTTT ACAGCTTCGGCATGCTGTTATTTGAAATTATAGGTAGGAGAAGAAACCATGATGCTAAACTTTCTGAGAGCCAGGAGTGG TTTCCAATGTGGGCTTGGAAAAAATTTGATGCTGGAGAACTTGGGGAGTTAATGATAGTGTGTGGGATAGAGGAGCAAAA TAAGGATATAGCAGAAAGAATGGTTAAGGTAGCTCTGTCATGTGTTCAGTATAGGCCAGAAGTAAGGCCTATGATGAGTG TTGTGGTGAAAATGTTAGAAGGTTCAGATGAAATTCCAAAGCCTTTGAATCCATTTCAGTACTTGATGAATGGGGGGAGT TTGGGTGCTCATCCAGTCCAAGTGTCACAGACTTATACAACAACTATTTCTTCAGGGTCTTCTGTTTTGGTAAGCGACAC CAACATCCTATGCGCTACTCCTGTTATGAGCAAGTATGAGATTGAATTAGCTACTAGCAAGTGA
Protein sequence (LotjaGi6g1v0241000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDKFLNDMEREKPIRFSGQQLRIATDNYSNLLGSGGFGAVYKGIFSNGTIVAVKVLRGSSADKRIEEQFMAEVGTIGRVH HFNLVRLYGFCFERNLIALVYEYMGNGSLDRFLFQENKSKISVINLLHEIAVGTARGIAYLHEECQQRIIHYDIKPGNIL LDRNFNPKVADFGLAKLCNRDNTHITMTGGRGTPGYAAPELWAPFSVTHKCDVYSFGMLLFEIIGRRRNHDAKLSESQEW FPMWAWKKFDAGELGELMIVCGIEEQNKDIAERMVKVALSCVQYRPEVRPMMSVVVKMLEGSDEIPKPLNPFQYLMNGGS LGAHPVQVSQTYTTTISSGSSVLVSDTNILCATPVMSKYEIELATSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 344 | 344 | 2.4E-183 | – | |
| PANTHER | 1 | 344 | 344 | 2.4E-183 | – | |
| Gene3D | 3 | 103 | 101 | 6.8E-28 | – | |
| SUPERFAMILY | 11 | 300 | 290 | 7.55E-77 | ||
| ProSiteProfiles | 26 | 313 | 288 | 36.075 | ||
| SMART | 26 | 299 | 274 | 6.7E-32 | ||
| Pfam | 30 | 299 | 270 | 9.8E-47 | ||
| ProSitePatterns | 32 | 54 | 23 | - | ||
| Gene3D | 104 | 307 | 204 | 1.0E-52 | – | |
| ProSitePatterns | 149 | 161 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0241000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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