Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi6g1v0241700 |
Transcript ID | LotjaGi6g1v0241700.3 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Ankyrin repeat-containing protein; TAIR: AT3G18670.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q25338|LITD_LATTR Delta-latroinsectotoxin-Lt1a; TrEMBL-Plants: tr|A0A072V7U6|A0A072V7U6_MEDTR Ankyrin repeat plant-like protein; Found in the gene: LotjaGi6g1v0241700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:55341924..55346281) extracted from Lotus japonicus Gifu genome v1.2.
TCTGCAGAAGAATGGAAGCAAAGCCAAACAACACTTGCCAACTGCAGTTTCTTCTTTCTCCCTCTTCCTTTGTTTTTCAG GTAATCAAACTAAACCTTATTCCTCTCTTGCTTCTCTTACTCATCTTTGTTCTTCTTTCGGCCTTTTCTTCCCTCTCTGC AGCTCTTGTTTTGAGTAATATCTTCTTGTTGTTGGAGTATCTACCATGAGTCAGATCTTTCAGTTTCTCATTTTTTAATT TTCTTTCTTATATTAGTGGTTTACACCCCAAATAGAACGTCTACTTGTAATTTTCCTTTCTTTTTTATGGAAAAATGAAT TTTATGAGTTTGGTAGACTACTCATCCCTTCCATAACAGCTTGAGGTGACTTTGTCGAGAGTGTGCAAACTTTTTGGTGA AGACTCAAGAATCAAAGTAAGGAATTAAGATGATAAGTATGTAAGTATGTTAGTATTATTTATTTTACCATTATCAATTT TACTTTTAACTTTCACAACATTTTAAGATTTATGTACAATAAGTATATGGATAATACTCAATTAGTAAAAGCTGATGGAC ATATAGGTTGAGGAGTGGAAGGTCCAGAGTTTAACTCTTAAAAATTATAGTTTATCTTTCTGATCTAACAAAAAAAAATT ATGTAGTATATGTGTATATGCGTGGGACCAAATTGTATAACCTTTTTTGTGCTATAGGCCATGGCCTTAATCAAAGCCCA GCTTAAGTTTACTGATTGCCATATAGTTGTGCTTGGGCCACAGTTGAATGCTGTCAATGATTCTATCAAGTTACATTGTA TGCATTGACCAAAAAAAAAAGTTACATTGTATGCATCTTTTTTTTTGGTTACCTAGACCACATTATATGCTCTTTTATTC ATGCCTTCTTTGATACCTAGACCAATTTGTAAAGGCCTTTTTTTTTCAAAAAAATGATTTCTTTTTTAATGCCCTATTTT GATTTGTTTTCAACCATTTAAAATCAAACTAAATGTATACCTCTCCTGTTATATACATACATAAATTCTTTAAATTTTAA TTTTAAATTTCAACTAATTGCTTTTGATGAAAGTATCACCTTTTTAGTTATTATTGAAGGTTGTTATTATTTTATGCAAC TCTAAAATGAATACAATATCCCCTTTACTTTTAGTGATTAATTTAAGCTCACAAAATAAGTTATTTGTAAAAATAAAATG ATTAATATAAGGTAATTGTCATTCCATGCATTTTGAACTTGACCGATTACTTAAAAAAATATAATATCATATATTTATTT TTGTCACAGAGAAATGGCTACAACAGACATCACATTTTTCGAACAACAGTTATCAAGGACTGCTTCGGCTCAGTTTAGGA GGCCTGAATTTCAAGGGTCCACTAGTAAGCTCTCTATCCCTTCTTAAAATAAATACTTATGTAATTAAAAACTTGGATGA AATAACCTAATTAATTAAAAACCAAACAGTAATTGAAATCTTCACTTTCCAAAAAATTTCATGTCTTAATTATTACTCTA TGTTTTTTTTTGTTACAAGAGGAAATTTATTACTCTATGTTTGATCTTGCTTAAAACTTTAAGGGATTTCCACATTATGT CAAAGAGCAAATCACAAAAATGGATTGAATATCATATATTTCACTCAAAGCCTTAAAATATTAGATGTGTGACGTTTCTC ACTTCTAAACTGCTCGACACTTTCTTTTTCTTTCGTTTTGAGGCTTCTTACTATGTAACCCAACACTCTACCGAAAAACT ACTATTACTAATTGTAATTCCAAAATGGAACCTAATCCCAATTGATTAACTTGTTGCAGAAGAAGCTAGGCACAGATACC TCAGTCAATGTGTCCCACTTCACAAAGCAGCACTGAAAGGTGATTGGAAAGAAGCTAAGAAAATCTTAGATCAAGATCCA ACTCTGCTAATATCTGCCATAACAGAAGGGTGGGCAACAGTCCTCCACATAGCAGTGGGAGCAGATCATGCTCATTTTGT GGAGGAGTTGGTGAAGATGATGAGGCCTCATCATTTGGAATTGCAAGATCTTAAAGGAAACACTGCTTTTTGCTTTGCTG CAGCAGTTGGGAATGTGCACATTGCTGAGATAATGAGGAAAGAGAACAATGATTTGCCAAAAATTAGGGGTGGAGAAGGA GCCACTCCTCTTCACTTGGCTGTTTTACAAAGAAGAAGTGAAATGGCATGGTACCTTTATGACAAATCCAAAGAAATACT CCAAGAAGAGGATTGGACTACAGTGTTTCTCATTTGTATAAACTCTGCACTCTATGGTAAGCATATTTAAATAGATAATT TAACTCTGAACCATTCATGGAAAATTCAATTAAGCCAAGCTTATACTTTGGAATATCATCATGCAGATTTAGCCTTGGAA ATGCTAAATGAGAACGAATCATTAGCTTTTGCAAGAGGAGATGAGAATGAGACCGGTTTACATGTCTTGGCGCGAAAGCC TTTAGATTGTGGTTGTCAAAGTCACAAACGTCGAAATAACCTCCTTCATTTCTGTAAGTTCTTAGGACTTTGCATGATCC TTTCAATTGTTAAAAAAGTTATTTTGATTTGTGAACTAAATGTTTCTTGGTCCAGAGAAAAGTTCCAACAAATAAATTGT TTGATTACTTGTCCCAGGTAAGAAGGATGCTCCGGTTCTCAAACTTATAGAACGCATGTGGAGCATATTTCTTGCCTTAG ATGATGAGATGATGAAGAAAGTCATGAGTGAACCTTACCAATTAACATGTATTGCTGCACAAGTTGGAAATTTTGAGTTC CTATCTGTGGTTATGAGCACTTATCCTGATATGATATGGGAATTGAATACCATGGATCAAAGCATAATTCACATTGCTGC TTTGCACCGTCATGCTAGTATCTTCAATTTGATCCATGAAATTGGCCCCACCAAAGATATCATATTAACTTTCATAGATA AGAAGAAAAACAATTTATTGCACTGTGTTGCAAAGTTAGCACCACCAGACCGACTCAATATAGTTTCTGGAGCAGCCCTT CAAATGATGCTAGAGTTGTCATGGTTTGAGGTATATATATATATATATATATATAGTGTGTGTGTGATTGGTTCCCTGAT TTGATAGAGTAAAATTTATTTTTGATGCCGATATAGATGTTTTAGAGCCATTTTGGAGAATTACTCAGCCCCAAAGTTAA TTCGGCTAGAAGCTAAAGAGTAGGTTTTTCGTTGAACATAATCAACTGCGAGATTTTACAACTGGATTTTACAACTTTAC TCTATAAAAAGCAATTTTTTCATAAATGTATCTAAACATAAATCACTCGTCGCTTTCAACTCACTTTCACTTTTACTATG ATCAATTTTACCAAAAATCATTTGTGACATCGTTAATCAAAATTCACACATAGTCCATAAGTATTCTTCAAGATTCTTCT TTCCTCCTACACATTGTACACTTTTTATTTCTCCTATTCGTTATGCATCTTAACATAAATACTTAATCCATATGAGTCAT GACAGAGTTATAATACTTTTCTAATGCTTAAATTATGCAAGATTCTATCAAGTTAAGACTTCATGTACATAATATGATGT ATATATATTATTGATTTGGCAGGAGGTGAAAAAGATGATGCTACCATCATCCTTAGAAATGAAAAATTCTGAAGACCTGA CTCCTGGTGAACTATTCACCAGGGAACATGCAGACTTGCTTAAAAGAGCTGAGGCTTGGATGGAGAGAACAGCAAACTCT TGCATGGTTGTTTCAACTTTGATAGCTACCGGAGTGTTCTCTGCTGCATTTAGTTTACCAGGCGGTAACAACGACAACAC AGGATCACCCAATTATTTGGAGAAACCATCATTCCTCTTGTTTGCATTATCAGATGCCACGGCATTGATCTCATCTTCAA CCTCAATCCTAATTTTCCTGTCCATCCTCATCTCGCGATACGCAGAGGATGATTTTCTCAAGTCACTGCCCTTGAAGTTG ATATCTGGACTCATTGCACTTTTCATCTCAATAATCAGCATGATGGTAGCATTCAGCAGTGCCTTCTTTATAACATATTA TCATGGTTTGAAGTGGGTTCCTTACCTCATTTCTGGACTAGCATTTCTACCAATACCTTTGTTTATCTATCTGCAGTTTT CTCTGTGGTCTGATATAGCGTATTCAGCCTACATTTGTAGTTCTTTGTTTAGGCCACGTAAACGTATGATTCACTAGCTA GAAAGATCGAGCTTATTCTAAATAATGCATTTTAATTTCTTGCTGTATGAGTTACGGTGTCTCCCAATAATGGTTACATT AGTTGGAAGCAAATAGGTGATTGTGACTACATTTATTA
CDS sequence (LotjaGi6g1v0241700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATAAGTATAGAAATGGCTACAACAGACATCACATTTTTCGAACAACAGTTATCAAGGACTGCTTCGGCTCAGTTTAG GAGGCCTGAATTTCAAGGGTCCACTAAAGAAGCTAGGCACAGATACCTCAGTCAATGTGTCCCACTTCACAAAGCAGCAC TGAAAGGTGATTGGAAAGAAGCTAAGAAAATCTTAGATCAAGATCCAACTCTGCTAATATCTGCCATAACAGAAGGGTGG GCAACAGTCCTCCACATAGCAGTGGGAGCAGATCATGCTCATTTTGTGGAGGAGTTGGTGAAGATGATGAGGCCTCATCA TTTGGAATTGCAAGATCTTAAAGGAAACACTGCTTTTTGCTTTGCTGCAGCAGTTGGGAATGTGCACATTGCTGAGATAA TGAGGAAAGAGAACAATGATTTGCCAAAAATTAGGGGTGGAGAAGGAGCCACTCCTCTTCACTTGGCTGTTTTACAAAGA AGAAGTGAAATGGCATGGTACCTTTATGACAAATCCAAAGAAATACTCCAAGAAGAGGATTGGACTACAGTGTTTCTCAT TTGTATAAACTCTGCACTCTATGATTTAGCCTTGGAAATGCTAAATGAGAACGAATCATTAGCTTTTGCAAGAGGAGATG AGAATGAGACCGGTTTACATGTCTTGGCGCGAAAGCCTTTAGATTGTGGTTGTCAAAGTCACAAACGTCGAAATAACCTC CTTCATTTCTGTAAGAAGGATGCTCCGGTTCTCAAACTTATAGAACGCATGTGGAGCATATTTCTTGCCTTAGATGATGA GATGATGAAGAAAGTCATGAGTGAACCTTACCAATTAACATGTATTGCTGCACAAGTTGGAAATTTTGAGTTCCTATCTG TGGTTATGAGCACTTATCCTGATATGATATGGGAATTGAATACCATGGATCAAAGCATAATTCACATTGCTGCTTTGCAC CGTCATGCTAGTATCTTCAATTTGATCCATGAAATTGGCCCCACCAAAGATATCATATTAACTTTCATAGATAAGAAGAA AAACAATTTATTGCACTGTGTTGCAAAGTTAGCACCACCAGACCGACTCAATATAGTTTCTGGAGCAGCCCTTCAAATGA TGCTAGAGTTGTCATGGTTTGAGGAGGTGAAAAAGATGATGCTACCATCATCCTTAGAAATGAAAAATTCTGAAGACCTG ACTCCTGGTGAACTATTCACCAGGGAACATGCAGACTTGCTTAAAAGAGCTGAGGCTTGGATGGAGAGAACAGCAAACTC TTGCATGGTTGTTTCAACTTTGATAGCTACCGGAGTGTTCTCTGCTGCATTTAGTTTACCAGGCGGTAACAACGACAACA CAGGATCACCCAATTATTTGGAGAAACCATCATTCCTCTTGTTTGCATTATCAGATGCCACGGCATTGATCTCATCTTCA ACCTCAATCCTAATTTTCCTGTCCATCCTCATCTCGCGATACGCAGAGGATGATTTTCTCAAGTCACTGCCCTTGAAGTT GATATCTGGACTCATTGCACTTTTCATCTCAATAATCAGCATGATGGTAGCATTCAGCAGTGCCTTCTTTATAACATATT ATCATGGTTTGAAGTGGGTTCCTTACCTCATTTCTGGACTAGCATTTCTACCAATACCTTTGTTTATCTATCTGCAGTTT TCTCTGTGGTCTGATATAGCGTATTCAGCCTACATTTGTAGTTCTTTGTTTAGGCCACGTAAACGTATGATTCACTAG
Protein sequence (LotjaGi6g1v0241700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MISIEMATTDITFFEQQLSRTASAQFRRPEFQGSTKEARHRYLSQCVPLHKAALKGDWKEAKKILDQDPTLLISAITEGW ATVLHIAVGADHAHFVEELVKMMRPHHLELQDLKGNTAFCFAAAVGNVHIAEIMRKENNDLPKIRGGEGATPLHLAVLQR RSEMAWYLYDKSKEILQEEDWTTVFLICINSALYDLALEMLNENESLAFARGDENETGLHVLARKPLDCGCQSHKRRNNL LHFCKKDAPVLKLIERMWSIFLALDDEMMKKVMSEPYQLTCIAAQVGNFEFLSVVMSTYPDMIWELNTMDQSIIHIAALH RHASIFNLIHEIGPTKDIILTFIDKKKNNLLHCVAKLAPPDRLNIVSGAALQMMLELSWFEEVKKMMLPSSLEMKNSEDL TPGELFTREHADLLKRAEAWMERTANSCMVVSTLIATGVFSAAFSLPGGNNDNTGSPNYLEKPSFLLFALSDATALISSS TSILIFLSILISRYAEDDFLKSLPLKLISGLIALFISIISMMVAFSSAFFITYYHGLKWVPYLISGLAFLPIPLFIYLQF SLWSDIAYSAYICSSLFRPRKRMIH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 423 | 423 | - | – | |
PANTHER | 19 | 585 | 567 | 1.5E-167 | – | |
PANTHER | 19 | 585 | 567 | 1.5E-167 | – | |
Gene3D | 22 | 366 | 345 | 7.7E-26 | ||
ProSiteProfiles | 44 | 180 | 137 | 15.698 | ||
SMART | 44 | 73 | 30 | 670.0 | ||
SUPERFAMILY | 48 | 224 | 177 | 5.13E-20 | ||
SMART | 79 | 108 | 30 | 220.0 | ||
Pfam | 84 | 175 | 92 | 3.6E-8 | ||
SMART | 114 | 143 | 30 | 6.5 | ||
SMART | 148 | 177 | 30 | 1.4 | ||
ProSiteProfiles | 148 | 180 | 33 | 8.95 | ||
SMART | 309 | 338 | 30 | 36.0 | ||
Pfam | 419 | 531 | 113 | 8.1E-27 | ||
Phobius | 424 | 445 | 22 | - | – | |
TMHMM | 426 | 448 | 23 | - | – | |
Phobius | 446 | 464 | 19 | - | – | |
Phobius | 465 | 490 | 26 | - | – | |
TMHMM | 468 | 490 | 23 | - | – | |
Phobius | 491 | 510 | 20 | - | – | |
TMHMM | 503 | 525 | 23 | - | – | |
Phobius | 511 | 534 | 24 | - | – | |
Phobius | 535 | 553 | 19 | - | – | |
TMHMM | 540 | 562 | 23 | - | – | |
Phobius | 554 | 577 | 24 | - | – | |
Phobius | 578 | 585 | 8 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0241700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…