Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi6g1v0243800 |
Transcript ID | LotjaGi6g1v0243800.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Pentatricopeptide repeat-containing protein; TAIR: AT5G55840.1 PPR superfamily protein; Swiss-Prot: sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840; TrEMBL-Plants: tr|A0A0R0G3T3|A0A0R0G3T3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0243800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:55667891..55673442) extracted from Lotus japonicus Gifu genome v1.2.
CGAAAAGTGCAATTAAGCCAATAAATAAATAACCTTGTAGTAGAGTATAAGCAAACCCTGGGAGAAAAGATCGGGGAATC AATTCAATCTGTGTTTGAAGTTGAGAAAATCGAAACAGTGCTTGTTTAGCAATGGCGCGCGAGCAACACTCATTGATTGC TGAACCCTAAATTCATCTTCTATGAAATTCACAGTCAAGGTAACCCTTTATGCCTTTTACCTTCCTCACACTTCCCACTT GAATTGAAACACACTTCCTCACAAAACCCACAATTTGATTTCTGTTTCTTCCCTTTTTGTTTTTGATTTTCAGTATAAAC TTTGCACTTTTGGAATAATCAATCGATGGTTTTTGACATGGAGAAGAGTATATACACATTTCTCACTGTACACCGTTGGG AATCTCTGAATTGCATGAACTATAGACTAGGTTCCCTCAGGCCTGTCCATGGAAGGTTAGCTCTGAACTTTCTCAAATGG TTCATGAAGCAACCCAATTTGGAGCTCAATCATGTGACTCATATAATTTCCACTACCACTCATGTACTTGTTAGAGCTAG AATGTACAACTTTGCCAAAACAACATTGGCACATTTGTTACATATGCCAATTGGTTTGAACTCTGTTTTTGGTGCTTTGA TGGAGACATACCCCATTTGCAACTCCAACCCTGCTGTTTTTGATCTCCTGATTAGAGTTTGTTTGAGGGAAAAGATGGTT GGCGATGCTGTGCAGGTTTTTTACTTGATGGGTTTTCGAGGGTTTAAGCCGTCTGTGTATACTTGTAACATGGTGTTGGA TTCCTTGGTGAAGGATCGGAAGAGTGAGTTGTTTTGGTCGTTTTTCAAAGGAATGCTTGCGAATAGAGTTAGTCCGAATG TTGCTACGTTCAACATATTGTTGAATGCTTTATGCGAACGTGGGCGGTTTAAGAGTGCTGGCTTTCTTCTGAGGAAAATG GAAGAAAGTGGTCATTTTCCGACTGCAGTTACTTATAATACTTTGCTTAATTGGTATTGCAAGAAAGGAAGGTATAAGGC TGCATCTGAGCTGATTGATTGTATGGCTTCGAAGGGTATTGCGGCAGATGTTTGTACATATAATGTGTTGATAGATAATT TGTGCAGGGAAAGTAGGAGTGCAAAGGCTTATTTAATATTGAGAAGGATGAGAAAGAATATGGTGTATCCTAATGAGATA ACTTATAATACTCTTATCAATGGATTTGTTAAGGAGGGGAAGATTGGAGTTGCTGCTAAAGTTTTTGATGAGATGTTATC CTTTAATTTGTTACCGAACTGTATCACTTACAATACTTTGATTGATGGGCACTGTAGTAAGGGAAACATAGAGGAAGCTT TCAGACTTTTGGATGAAATGGTATCTCATGGTTTGAGACCCAATGAAGTAACATATGGGGCTCTTTTAAATGGGTTGTCC AAGCATTCTGAATTTGGATTGGTTTCCAGTATTCTTGAGAGAATGAGGATGAATGGGGTGAGAGTCGGTCATATTAGTTA TACAGCAATGATTGATGGGTTGTGTAAGAATGGCTTGCTTGAAGAAGCTGTGCACTTTCTGGATGATATGTTAAAAGCTT CTATCAATCCTGATGTTGTTACGTTTTCTGTGCTCATAAATGGTTTTCTCAGGGCTGGGAAGATAAATAATGCAAAGGAG ATAATGTGTAAAATGTATAAGAATGCAGTTGTACCAAACAGCATTTTGTACTCAACATTAATCTACAACTACTGCAAGAT GCGAAACCTAAAAGAGGCGTTGAATACTTACGCAGTTATGAACCACAGTGGTCATGTTTCAGATCACTTTACTTGTAATG TCTTGGTTGCCACTTTCTGTAGAAGTGGGAGACTTAAAGAGGCTGAGTATTTTATGGATCACATGAGCAGGATGGGTCTT GATCCTAGTACTTCTGCATTTGATTGCATTATAAATAGTTATGGAAATTCTGGTGATGCATCAAAAGCATTTTCTATGTT TGATCAAATGAAAAGTGTCGGTCATTTCCCAAGTCAGTTCACATATGGGGGTCTATTGAAAGGTCTTTTTTCTGGTGGGT ATATTAAGGAAGCCAAAGCATTTTTGGATAGACTTAGTTGCATTCCCTATGCCATTGATAGTGTTATCTACAACACAATA CTTACTTGGACATGCAGATCAGGAAACATATCGGCTGCGGTTGCCCTTATTAATGAAATGGTCATGAAGAATTTTGTGCC TGACAGTTATACGTACACCAATCTTATTGGAATGCTATGCAAGAAGGGTAGAGTGGTTGCTGCACTCCTTTTGTCAGGAA AGGCAATGGAGAAAGGATTATTATCTCCAAATCCTGCCATGTACACTAGTTTAGTTGATGCTCTTCTTAAGGAAGGACAT TCAAAAGCCGCTTTGTATATTTTTGAAGATATGCTGAACAAAGATGTTGGCCCTGATACTATAGCATTTAATGTGCTTAT GGATCAATACTCAAGGAAAGGGAAAATGTCGAAGGTAAACGATATCCTATTAGCAATGAGGAGTCGAAGTCTGTGCTTCA ACTTGGCTACTTACAACATTCTCCTGCATGGATATTCAAAGAGGCTGAATGTGGAAAGATGTTCTATGCTGTACAAGGAC ATGATCAGACATGGTTTTGCACCAGATAGGTTAACATGGCATGCTCTTATTCTTGGATTTTGTAAGTCGGGATCATTTGA TGTTGCTGTCAAAATTTTAAGATGGATAACACTTGAAGGTTCTGTAGCTGATTGTTCTACATTTAACATGCTGATTACCG AGTTATGTGAAAGGAATGAGATAAAAATGGCCATTGATCTGGTAAAACAAATGAATCTGTTAGGAGTTATTCCTAATGTA GATACATACAACGCCCTTTTTAATGGACGCATTAGAACTTGTGCTTTTGAGGAAGCCCATTGTGTTTTGCAAGCCTTGGT GGAAAGGGGTTATGTTCCTACATGTAAACAATATATTACTTTAATTAATGGCATGTGTAGGGTGGGAAACGTAAAAGGAG CCATGGAGGTACAAGATGAGATGAAAACACTTGGTGTCAGCTCCCAAGAGGTTTCTATGAGTGCTATTATAAGAGGGCTT GCACGTTCAAAGAAGAGTGAAAATGCTATTTGGGTTCTTGATTTCATGCTTGAGAAGCAAATCATTCCAACTGTAGCTAC TTTCACTACTTTAATGCACATCTATTGCCATGAAGCTAATGTTGCAAAGGCTTTAGAATTGAGGACTGTTATGGAAAAAT GCCATGTGAAGCTTGATGTTGCTGCATACAATGTTCTTATATCTGGCCTTTGTGCTGATGGTGATATTCCAGCTGCCTTT AAACTTTATGAAGAGATGAAGCAAAGAGATCTTTGGCCTAATACCTCCATATACATAGTTCTTATTGATTCTTTATGTAC TGGAAACTACCATATTCAAAGTGAAAAGCTTTTGATGGATTTACAGGCCAGGGAATTGGTTTCTTTAGATTTGACTGAAG GCACCGAAAGATTGCATGAATTATTGATGATTGCCAGGAAAGAATTAATTCACTTGAGGTCCAAAAGAAGAAGAAAATTT GGTTGATCACAGTGTGCTTTTTCCTTGTCCAGAATGTGAGCTGGCAGATGAGTCTGACACGGCTACTAGTTCTATTGGAC AGCTTGGTTAGTATCTTGCAGGGTCAGATGGGGGATGATTTAATGACTGCAAAGTTGGGTTTGTTAGGGAATATACCCAT GAAGAAACCGCAGCACGCGCCTATGACTTGGCAGCATTGTAGGCCAGGACTCCATTCTCAAATTTCCAGTATGTTTCCTG ATTCTTGAATTAAAATGATGATTTAGTAGTTTTTTATTTATTTTTAAATCCACATATGATCATCTTAGTATATATGTAAA CATCTGCTTTTGGTTGTAGTTATCAAATTATCAAGAGGAGCTCAAAGAGATGGAGGACCAATCAGAAGAAGAATGCATGG GATCCTTAATAAGGTTTAATTGTTAAATCCTGAATTTTTTACTGATAAATCACATATGTAGATCACTTCTGAAGCCTTTT CTTTATTATTTTTTTTTTTTTGAGCTATTGAAATATGTTCTTATGGTTTATAGTTATACAACTTTCATGAATCATTCTCC ATTCTCCAATATGCAGAAACAGCAATGGGTTGCAAGGTACAGAGGATTTATTGCAAATTGCAATTTTATTTTGCAAAACC AAAAACCCAAGGATATTATTCCACGCTTATCTCTTGCCCTGCAAAATCAGGAGGACAGATACCAGATCCAAAAAAAAAAA CCCAAAACAAGAGAGCGCTTAACGTGACTATAGACGAAGTGTGTAGAACACTGTTACAAGGTATTTTTCCTTGGTTATAG GCTTGAAGTAATGACATAGATTTCTCAAGTTTGTGGTCATTGAACAAACAACTTTTTGTGTAGGTGTTGTGGTCATTCTG TTTAAAATTCTTGCTCGTTTTTTGCTAGTAGCCCTTGTGCATAATTTTTATTACTTGGATACTAATTATTAACTAAATCA TTCCCCTGTTAATAGGTGTTACTGGAACTGAACTAGTTAAAAATGGCATCAAGCATTCGAGCAAGGAAGCAGAAAGTAAA GTGAAGGAACATAAACCCGATGGATGGTCACATTTTTTTTTGACAAGCCTGATGGATGGTCACATGTAGTTCTCAGTAGG TTCTCATGTACAACACATGAGCTCTAGTTTCTTTTGCATTTCCTGATTGATACATTTGCAGGTTCATGTGAAGAGCTGCG AAACAGGACAATGTTTCTTAAGCTTCTAGAGGCTGTGCTGAACTAGGGAACCACATGATTGTGGGGACAAACAGTGGTGG TGGTCGTGCATTGAAGCTTGATAGACTTGTATTTGAAAATTTGATAATTTGAGCTGCTCAAAATGCATTTTCTTAATGAA AAGTCAGCATGTTATTTTGCAGACCAGGACATAAATTTTGCAATGGAGGCTTCTGAAAATGTCAGAGCACTTTTATGGCT GCTTATTTGATCATGGAGGAGGCTCAGAATAGTGATTATATTACTTGTATTAGGAAGGTTTTTGATTTCAGGATGTAGAG GAGTTTATACTTATCTGGTTTTGATTACAGCAAAAGCAATAACTTGTACTGGCCTGGTGTGATGTTGCTAGAGATTAACT CAATGCTGTAATATAATTCTCTTATTTCTCTGATATCTATTCACAACCTGTGACCCTTATGTACACCTGTACGAAGTTGT TGAAGAGCAAACTAGTTCAGTAAGATGAAATGAGCTGAATCAAACACCTGAAATTGGTTTTTTTATATGAGAATCATCAA AAACAGGTTTTGAAACGAGCTGGGATCCTCTTAGCAATTGGATGGTCAAGCAAGGAATCAAGGATAGTGAAAACTTTTTG AATACATCCAACCAATTGTTGTGTCCAACATTAATTGAAGAAGTACCTTGAATTAATTTATCTTTTAATTCAAATTAAAA CAAACTTGAAACTTGGACTTCTTCCATGACCT
CDS sequence (LotjaGi6g1v0243800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTTTGACATGGAGAAGAGTATATACACATTTCTCACTGTACACCGTTGGGAATCTCTGAATTGCATGAACTATAG ACTAGGTTCCCTCAGGCCTGTCCATGGAAGGTTAGCTCTGAACTTTCTCAAATGGTTCATGAAGCAACCCAATTTGGAGC TCAATCATGTGACTCATATAATTTCCACTACCACTCATGTACTTGTTAGAGCTAGAATGTACAACTTTGCCAAAACAACA TTGGCACATTTGTTACATATGCCAATTGGTTTGAACTCTGTTTTTGGTGCTTTGATGGAGACATACCCCATTTGCAACTC CAACCCTGCTGTTTTTGATCTCCTGATTAGAGTTTGTTTGAGGGAAAAGATGGTTGGCGATGCTGTGCAGGTTTTTTACT TGATGGGTTTTCGAGGGTTTAAGCCGTCTGTGTATACTTGTAACATGGTGTTGGATTCCTTGGTGAAGGATCGGAAGAGT GAGTTGTTTTGGTCGTTTTTCAAAGGAATGCTTGCGAATAGAGTTAGTCCGAATGTTGCTACGTTCAACATATTGTTGAA TGCTTTATGCGAACGTGGGCGGTTTAAGAGTGCTGGCTTTCTTCTGAGGAAAATGGAAGAAAGTGGTCATTTTCCGACTG CAGTTACTTATAATACTTTGCTTAATTGGTATTGCAAGAAAGGAAGGTATAAGGCTGCATCTGAGCTGATTGATTGTATG GCTTCGAAGGGTATTGCGGCAGATGTTTGTACATATAATGTGTTGATAGATAATTTGTGCAGGGAAAGTAGGAGTGCAAA GGCTTATTTAATATTGAGAAGGATGAGAAAGAATATGGTGTATCCTAATGAGATAACTTATAATACTCTTATCAATGGAT TTGTTAAGGAGGGGAAGATTGGAGTTGCTGCTAAAGTTTTTGATGAGATGTTATCCTTTAATTTGTTACCGAACTGTATC ACTTACAATACTTTGATTGATGGGCACTGTAGTAAGGGAAACATAGAGGAAGCTTTCAGACTTTTGGATGAAATGGTATC TCATGGTTTGAGACCCAATGAAGTAACATATGGGGCTCTTTTAAATGGGTTGTCCAAGCATTCTGAATTTGGATTGGTTT CCAGTATTCTTGAGAGAATGAGGATGAATGGGGTGAGAGTCGGTCATATTAGTTATACAGCAATGATTGATGGGTTGTGT AAGAATGGCTTGCTTGAAGAAGCTGTGCACTTTCTGGATGATATGTTAAAAGCTTCTATCAATCCTGATGTTGTTACGTT TTCTGTGCTCATAAATGGTTTTCTCAGGGCTGGGAAGATAAATAATGCAAAGGAGATAATGTGTAAAATGTATAAGAATG CAGTTGTACCAAACAGCATTTTGTACTCAACATTAATCTACAACTACTGCAAGATGCGAAACCTAAAAGAGGCGTTGAAT ACTTACGCAGTTATGAACCACAGTGGTCATGTTTCAGATCACTTTACTTGTAATGTCTTGGTTGCCACTTTCTGTAGAAG TGGGAGACTTAAAGAGGCTGAGTATTTTATGGATCACATGAGCAGGATGGGTCTTGATCCTAGTACTTCTGCATTTGATT GCATTATAAATAGTTATGGAAATTCTGGTGATGCATCAAAAGCATTTTCTATGTTTGATCAAATGAAAAGTGTCGGTCAT TTCCCAAGTCAGTTCACATATGGGGGTCTATTGAAAGGTCTTTTTTCTGGTGGGTATATTAAGGAAGCCAAAGCATTTTT GGATAGACTTAGTTGCATTCCCTATGCCATTGATAGTGTTATCTACAACACAATACTTACTTGGACATGCAGATCAGGAA ACATATCGGCTGCGGTTGCCCTTATTAATGAAATGGTCATGAAGAATTTTGTGCCTGACAGTTATACGTACACCAATCTT ATTGGAATGCTATGCAAGAAGGGTAGAGTGGTTGCTGCACTCCTTTTGTCAGGAAAGGCAATGGAGAAAGGATTATTATC TCCAAATCCTGCCATGTACACTAGTTTAGTTGATGCTCTTCTTAAGGAAGGACATTCAAAAGCCGCTTTGTATATTTTTG AAGATATGCTGAACAAAGATGTTGGCCCTGATACTATAGCATTTAATGTGCTTATGGATCAATACTCAAGGAAAGGGAAA ATGTCGAAGGTAAACGATATCCTATTAGCAATGAGGAGTCGAAGTCTGTGCTTCAACTTGGCTACTTACAACATTCTCCT GCATGGATATTCAAAGAGGCTGAATGTGGAAAGATGTTCTATGCTGTACAAGGACATGATCAGACATGGTTTTGCACCAG ATAGGTTAACATGGCATGCTCTTATTCTTGGATTTTGTAAGTCGGGATCATTTGATGTTGCTGTCAAAATTTTAAGATGG ATAACACTTGAAGGTTCTGTAGCTGATTGTTCTACATTTAACATGCTGATTACCGAGTTATGTGAAAGGAATGAGATAAA AATGGCCATTGATCTGGTAAAACAAATGAATCTGTTAGGAGTTATTCCTAATGTAGATACATACAACGCCCTTTTTAATG GACGCATTAGAACTTGTGCTTTTGAGGAAGCCCATTGTGTTTTGCAAGCCTTGGTGGAAAGGGGTTATGTTCCTACATGT AAACAATATATTACTTTAATTAATGGCATGTGTAGGGTGGGAAACGTAAAAGGAGCCATGGAGGTACAAGATGAGATGAA AACACTTGGTGTCAGCTCCCAAGAGGTTTCTATGAGTGCTATTATAAGAGGGCTTGCACGTTCAAAGAAGAGTGAAAATG CTATTTGGGTTCTTGATTTCATGCTTGAGAAGCAAATCATTCCAACTGTAGCTACTTTCACTACTTTAATGCACATCTAT TGCCATGAAGCTAATGTTGCAAAGGCTTTAGAATTGAGGACTGTTATGGAAAAATGCCATGTGAAGCTTGATGTTGCTGC ATACAATGTTCTTATATCTGGCCTTTGTGCTGATGGTGATATTCCAGCTGCCTTTAAACTTTATGAAGAGATGAAGCAAA GAGATCTTTGGCCTAATACCTCCATATACATAGTTCTTATTGATTCTTTATGTACTGGAAACTACCATATTCAAAGTGAA AAGCTTTTGATGGATTTACAGGCCAGGGAATTGGTTTCTTTAGATTTGACTGAAGGCACCGAAAGATTGCATGAATTATT GATGATTGCCAGGAAAGAATTAATTCACTTGAGGTCCAAAAGAAGAAGAAAATTTGGTTGA
Protein sequence (LotjaGi6g1v0243800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVFDMEKSIYTFLTVHRWESLNCMNYRLGSLRPVHGRLALNFLKWFMKQPNLELNHVTHIISTTTHVLVRARMYNFAKTT LAHLLHMPIGLNSVFGALMETYPICNSNPAVFDLLIRVCLREKMVGDAVQVFYLMGFRGFKPSVYTCNMVLDSLVKDRKS ELFWSFFKGMLANRVSPNVATFNILLNALCERGRFKSAGFLLRKMEESGHFPTAVTYNTLLNWYCKKGRYKAASELIDCM ASKGIAADVCTYNVLIDNLCRESRSAKAYLILRRMRKNMVYPNEITYNTLINGFVKEGKIGVAAKVFDEMLSFNLLPNCI TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLRPNEVTYGALLNGLSKHSEFGLVSSILERMRMNGVRVGHISYTAMIDGLC KNGLLEEAVHFLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKNAVVPNSILYSTLIYNYCKMRNLKEALN TYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDASKAFSMFDQMKSVGH FPSQFTYGGLLKGLFSGGYIKEAKAFLDRLSCIPYAIDSVIYNTILTWTCRSGNISAAVALINEMVMKNFVPDSYTYTNL IGMLCKKGRVVAALLLSGKAMEKGLLSPNPAMYTSLVDALLKEGHSKAALYIFEDMLNKDVGPDTIAFNVLMDQYSRKGK MSKVNDILLAMRSRSLCFNLATYNILLHGYSKRLNVERCSMLYKDMIRHGFAPDRLTWHALILGFCKSGSFDVAVKILRW ITLEGSVADCSTFNMLITELCERNEIKMAIDLVKQMNLLGVIPNVDTYNALFNGRIRTCAFEEAHCVLQALVERGYVPTC KQYITLINGMCRVGNVKGAMEVQDEMKTLGVSSQEVSMSAIIRGLARSKKSENAIWVLDFMLEKQIIPTVATFTTLMHIY CHEANVAKALELRTVMEKCHVKLDVAAYNVLISGLCADGDIPAAFKLYEEMKQRDLWPNTSIYIVLIDSLCTGNYHIQSE KLLMDLQARELVSLDLTEGTERLHELLMIARKELIHLRSKRRRKFG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 93 | 245 | 153 | 2.1E-32 | ||
ProSiteProfiles | 108 | 142 | 35 | 9.482 | ||
TIGRFAM | 112 | 144 | 33 | 2.5E-4 | ||
PANTHER | 113 | 368 | 256 | 2.3E-208 | – | |
PANTHER | 113 | 368 | 256 | 2.3E-208 | – | |
ProSiteProfiles | 143 | 177 | 35 | 8.55 | ||
Pfam | 144 | 190 | 47 | 9.4E-11 | ||
TIGRFAM | 145 | 179 | 35 | 3.4E-5 | ||
ProSiteProfiles | 178 | 212 | 35 | 11.805 | ||
TIGRFAM | 181 | 213 | 33 | 5.8E-6 | ||
Pfam | 212 | 261 | 50 | 3.1E-15 | ||
ProSiteProfiles | 213 | 247 | 35 | 11.466 | ||
TIGRFAM | 215 | 248 | 34 | 4.6E-6 | ||
ProSiteProfiles | 248 | 282 | 35 | 10.578 | ||
TIGRFAM | 250 | 283 | 34 | 2.3E-5 | ||
Gene3D | 255 | 371 | 117 | 2.3E-35 | ||
Pfam | 279 | 310 | 32 | 6.9E-10 | ||
ProSiteProfiles | 283 | 317 | 35 | 12.397 | ||
TIGRFAM | 285 | 319 | 35 | 2.7E-9 | ||
Pfam | 317 | 366 | 50 | 7.5E-18 | ||
ProSiteProfiles | 318 | 352 | 35 | 14.206 | ||
TIGRFAM | 320 | 354 | 35 | 1.8E-11 | ||
PANTHER | 328 | 505 | 178 | 2.3E-208 | – | |
PANTHER | 328 | 505 | 178 | 2.3E-208 | – | |
ProSiteProfiles | 353 | 387 | 35 | 9.558 | ||
TIGRFAM | 355 | 386 | 32 | 0.0023 | ||
Gene3D | 372 | 453 | 82 | 1.9E-20 | ||
ProSiteProfiles | 388 | 422 | 35 | 11.849 | ||
TIGRFAM | 390 | 424 | 35 | 2.5E-9 | ||
Pfam | 390 | 435 | 46 | 3.3E-15 | ||
ProSiteProfiles | 423 | 457 | 35 | 11.082 | ||
TIGRFAM | 425 | 458 | 34 | 7.2E-5 | ||
Gene3D | 454 | 593 | 140 | 4.8E-30 | ||
ProSiteProfiles | 458 | 492 | 35 | 9.493 | ||
TIGRFAM | 461 | 493 | 33 | 8.8E-4 | ||
Pfam | 489 | 521 | 33 | 4.1E-7 | ||
ProSiteProfiles | 493 | 527 | 35 | 12.101 | ||
PANTHER | 494 | 799 | 306 | 2.3E-208 | – | |
PANTHER | 494 | 799 | 306 | 2.3E-208 | – | |
TIGRFAM | 495 | 528 | 34 | 2.2E-6 | ||
Pfam | 527 | 575 | 49 | 9.8E-10 | ||
ProSiteProfiles | 528 | 562 | 35 | 10.501 | ||
TIGRFAM | 531 | 563 | 33 | 2.1E-6 | ||
ProSiteProfiles | 563 | 597 | 35 | 6.292 | ||
Gene3D | 594 | 657 | 64 | 3.3E-12 | ||
ProSiteProfiles | 598 | 632 | 35 | 10.6 | ||
Pfam | 598 | 646 | 49 | 1.4E-13 | ||
TIGRFAM | 600 | 634 | 35 | 5.1E-6 | ||
ProSiteProfiles | 633 | 667 | 35 | 8.999 | ||
Gene3D | 658 | 731 | 74 | 7.0E-14 | ||
Pfam | 668 | 713 | 46 | 1.5E-7 | ||
ProSiteProfiles | 669 | 703 | 35 | 10.523 | ||
TIGRFAM | 672 | 705 | 34 | 5.6E-6 | ||
ProSiteProfiles | 704 | 738 | 35 | 8.638 | ||
Gene3D | 732 | 798 | 67 | 1.4E-12 | ||
ProSiteProfiles | 739 | 773 | 35 | 11.159 | ||
Pfam | 739 | 787 | 49 | 1.3E-9 | ||
TIGRFAM | 742 | 774 | 33 | 5.8E-7 | ||
ProSiteProfiles | 774 | 808 | 35 | 9.186 | ||
PANTHER | 793 | 948 | 156 | 2.3E-208 | – | |
PANTHER | 793 | 948 | 156 | 2.3E-208 | – | |
Gene3D | 799 | 945 | 147 | 1.4E-27 | ||
ProSiteProfiles | 809 | 843 | 35 | 9.843 | ||
Pfam | 811 | 854 | 44 | 9.7E-9 | ||
TIGRFAM | 812 | 845 | 34 | 0.0014 | ||
ProSiteProfiles | 844 | 878 | 35 | 9.383 | ||
Pfam | 874 | 907 | 34 | 5.7E-7 | ||
ProSiteProfiles | 879 | 913 | 35 | 9.482 | ||
TIGRFAM | 883 | 912 | 30 | 1.1E-4 | ||
ProSiteProfiles | 914 | 948 | 35 | 9.021 | ||
Pfam | 919 | 960 | 42 | 0.0015 | ||
PANTHER | 930 | 1050 | 121 | 2.3E-208 | – | |
PANTHER | 930 | 1050 | 121 | 2.3E-208 | – | |
Gene3D | 946 | 1054 | 109 | 1.5E-19 | ||
ProSiteProfiles | 949 | 983 | 35 | 8.451 | ||
ProSiteProfiles | 984 | 1018 | 35 | 12.288 | ||
Pfam | 984 | 1032 | 49 | 1.8E-13 | ||
TIGRFAM | 987 | 1016 | 30 | 3.1E-6 | ||
ProSiteProfiles | 1019 | 1053 | 35 | 6.303 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0243800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…