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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002933
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We have found 39 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.730s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0037669.1
n.a. PREDICTED: aminoacylase-1-like [Cucumis sativus] gi|449444431|ref|XP_004139978.1| chr0 12117555 12119058 -
2 domain predictions
1 GO term
Lj0g3v0313609.1
n.a. PREDICTED: aminoacylase-1-like [Glycine max] gi|356550846|ref|XP_003543794.1| chr0 163737638 163739017 +
2 domain predictions
1 GO term
Lj1g3v0841430.1
n.a. PREDICTED: IAA-amino acid hydrolase ILR1-like 6-like [Glycine max] gi|356515913|ref|XP_003526641.1| chr1 10908241 10915834 -
2 domain predictions
1 GO term
Lj1g3v1091080.1
n.a. PREDICTED: IAA-amino acid hydrolase ILR1-like 5-like [Glycine max] gi|356509130|ref|XP_003523305.1| chr1 13635672 13642733 -
2 domain predictions
1 GO term
Lj2g3v1495110.1
n.a. PREDICTED: aminoacylase-1-like [Glycine max] gi|356550846|ref|XP_003543794.1| chr2 23679975 23682303 +
2 domain predictions
1 GO term
Lj2g3v1984730.1
n.a. PREDICTED: acetylornithine deacetylase-like [Cicer arietinum] gi|502160563|ref|XP_004511787.1| chr2 29180295 29184344 -
2 domain predictions
1 GO term
Lj2g3v1984730.2
n.a. PREDICTED: acetylornithine deacetylase-like [Cicer arietinum] gi|502160563|ref|XP_004511787.1| chr2 29180295 29184472 -
2 domain predictions
1 GO term
Lj3g3v0290470.1
n.a. PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Glycine max] gi|356550474|ref|XP_003543612.1| chr3 2026931 2029084 -
2 domain predictions
1 GO term
Lj3g3v2718800.1
n.a. PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Glycine max] gi|356550474|ref|XP_003543612.1| chr3 33188060 33192402 +
2 domain predictions
1 GO term
Lj3g3v2719850.1
n.a. PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Glycine max] gi|356522765|ref|XP_003530016.1| chr3 33222183 33224523 +
2 domain predictions
1 GO term
Lj3g3v2719860.1
n.a. PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Glycine max] gi|356522765|ref|XP_003530016.1| chr3 33227686 33231365 +
2 domain predictions
1 GO term
Lj3g3v2719870.1
n.a. PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Glycine max] gi|356522765|ref|XP_003530016.1| chr3 33232654 33236328 +
2 domain predictions
1 GO term
Lj3g3v2719870.2
n.a. PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Glycine max] gi|356522765|ref|XP_003530016.1| chr3 33232654 33261721 +
2 domain predictions
1 GO term
Lj5g3v1174280.1
n.a. PREDICTED: N-carbamoyl-L-amino acid hydrolase-like [Cicer arietinum] gi|502116230|ref|XP_004495345.1| chr5 18788255 18792899 -
2 domain predictions
1 GO term
Lj5g3v1174280.2
n.a. PREDICTED: N-carbamoyl-L-amino acid hydrolase-like [Cicer arietinum] gi|502116230|ref|XP_004495345.1| chr5 18790284 18792899 -
2 domain predictions
1 GO term
Lj6g3v1392530.1
n.a. PREDICTED: allantoate deiminase, chloroplastic-like [Glycine max] gi|356530191|ref|XP_003533667.1| chr6 16620545 16625643 -
2 domain predictions
1 GO term
Lj6g3v1392530.2
n.a. allantoate amidohydrolase precursor [Glycine max] gi|351724933|ref|NP_001236563.1| chr6 16620545 16622253 -
2 domain predictions
1 GO term
Lj6g3v1392530.3
n.a. PREDICTED: allantoate deiminase, chloroplastic-like isoform X2 [Cicer arietinum] gi|502085401|ref|XP_004487908.1| chr6 16622172 16623747 -
2 domain predictions
1 GO term
Lj6g3v1413760.1
n.a. allantoate amidohydrolase [Glycine max] gi|218158555|gb|ACK75561.1| chr6 16754023 16758714 +
2 domain predictions
1 GO term
LotjaGi1g1v0155900.1
n.a. Aminoacylase; TAIR: AT1G44820.1 Peptidase M20/M25/M40 family protein; Swiss-Prot: sp|Q99JW2|ACY1_MOUSE Aminoacylase-1; TrEMBL-Plants: tr|I1LW56|I1LW56_SOYBN Aminoacylase; Found in the gene: LotjaGi1g1v0155900 LjG1.1_chr1 28053601 28070254 +
2 domain predictions
1 GO term
LotjaGi1g1v0262400.1
n.a. IAA-amino acid hydrolase ILR1, putative; TAIR: AT1G44350.1 IAA-amino acid hydrolase ILR1-like 6; Swiss-Prot: sp|Q8VYX0|ILL6_ARATH IAA-amino acid hydrolase ILR1-like 6; TrEMBL-Plants: tr|I1KAC2|I1KAC2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0262400 LjG1.1_chr1 64235958 64243818 -
2 domain predictions
1 GO term
LotjaGi1g1v0300800.1
n.a. IAA-amino acid hydrolase ILR1, putative; TAIR: AT5G54140.1 IAA-leucine-resistant (ILR1)-like 3; Swiss-Prot: sp|Q7XUA8|ILL5_ORYSJ IAA-amino acid hydrolase ILR1-like 5; TrEMBL-Plants: tr|I3STS5|I3STS5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0300800 LjG1.1_chr1 73381233 73388851 -
2 domain predictions
1 GO term
LotjaGi2g1v0024600.1
n.a. Succinyl-diaminopimelate desuccinylase; TAIR: AT4G38220.1 Peptidase M20/M25/M40 family protein; Swiss-Prot: sp|Q99JW2|ACY1_MOUSE Aminoacylase-1; TrEMBL-Plants: tr|A0A0S3T0P1|A0A0S3T0P1_PHAAN Aminoacylase; Found in the gene: LotjaGi2g1v0024600 LjG1.1_chr2 8563716 8574117 +
2 domain predictions
1 GO term
LotjaGi2g1v0414400.1
n.a. Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; TAIR: AT4G17830.1 Peptidase M20/M25/M40 family protein; Swiss-Prot: sp|Q9C5C4|ARGE_ARATH Acetylornithine deacetylase; TrEMBL-Plants: tr|I1LH18|I1LH18_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0414400 LjG1.1_chr2 91216989 91225209 -
2 domain predictions
1 GO term
LotjaGi3g1v0022900.1
n.a. IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr|I1M5E5|I1M5E5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0022900 LjG1.1_chr3 2511695 2516632 -
2 domain predictions
1 GO term
LotjaGi3g1v0316900_LC.1
n.a. Aminoacylase; TAIR: AT4G38220.1 Peptidase M20/M25/M40 family protein; Swiss-Prot: sp|Q55DP8|ACY1_DICDI Aminoacylase-1; TrEMBL-Plants: tr|A0A0S3T0P1|A0A0S3T0P1_PHAAN Aminoacylase; Found in the gene: LotjaGi3g1v0316900_LC LjG1.1_chr3 67120138 67125438 +
2 domain predictions
1 GO term
LotjaGi3g1v0316900_LC.2
n.a. Aminoacylase; TAIR: AT4G38220.1 Peptidase M20/M25/M40 family protein; Swiss-Prot: sp|Q55DP8|ACY1_DICDI Aminoacylase-1; TrEMBL-Plants: tr|A0A1J7GXP0|A0A1J7GXP0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0316900_LC LjG1.1_chr3 67120138 67125438 +
2 domain predictions
1 GO term
LotjaGi3g1v0428600.1
n.a. IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr|I3T1Y7|I3T1Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0428600 LjG1.1_chr3 83989592 83993563 +
2 domain predictions
1 GO term
LotjaGi3g1v0428600.2
n.a. IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr|I3T1Y7|I3T1Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0428600 LjG1.1_chr3 83989672 83993482 +
2 domain predictions
1 GO term
LotjaGi3g1v0428600.3
n.a. IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr|I3T1Y7|I3T1Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0428600 LjG1.1_chr3 83989770 83992298 +
2 domain predictions
1 GO term
LotjaGi3g1v0428700.1
n.a. IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr|I3T1Y7|I3T1Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0428700 LjG1.1_chr3 83994732 84004028 +
2 domain predictions
1 GO term
LotjaGi3g1v0428800.1
n.a. IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr|I3T1Y7|I3T1Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0428800 LjG1.1_chr3 84016325 84019534 +
2 domain predictions
1 GO term
LotjaGi3g1v0429000.1
n.a. IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr|I3T1Y7|I3T1Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0429000 LjG1.1_chr3 84027712 84034612 +
2 domain predictions
1 GO term
LotjaGi5g1v0186900.1
n.a. N-carbamyl-L-amino acid amidohydrolase; TAIR: AT5G43600.1 ureidoglycolate amidohydrolase; Swiss-Prot: sp|Q8VXY9|UAH_ARATH Ureidoglycolate hydrolase; TrEMBL-Plants: tr|G7I3Z0|G7I3Z0_MEDTR N-carbamyl-L-amino acid amidohydrolase; Found in the gene: LotjaGi5g1v0186900 LjG1.1_chr5 47437924 47443661 -
2 domain predictions
1 GO term
LotjaGi5g1v0186900.2
n.a. N-carbamyl-L-amino acid amidohydrolase; TAIR: AT5G43600.1 ureidoglycolate amidohydrolase; Swiss-Prot: sp|Q8VXY9|UAH_ARATH Ureidoglycolate hydrolase; TrEMBL-Plants: tr|G7I3Z0|G7I3Z0_MEDTR N-carbamyl-L-amino acid amidohydrolase; Found in the gene: LotjaGi5g1v0186900 LjG1.1_chr5 47439098 47443583 -
2 domain predictions
1 GO term
LotjaGi6g1v0244500.1
n.a. Allantoate amidohydrolase; TAIR: AT4G20070.1 allantoate amidohydrolase; Swiss-Prot: sp|O49434|AAH_ARATH Allantoate deiminase; TrEMBL-Plants: tr|I3SAX9|I3SAX9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0244500 LjG1.1_chr6 55718020 55723471 +
2 domain predictions
1 GO term
LotjaGi6g1v0244500.2
n.a. Allantoate amidohydrolase; TAIR: AT4G20070.1 allantoate amidohydrolase; Swiss-Prot: sp|O49434|AAH_ARATH Allantoate deiminase; TrEMBL-Plants: tr|I1L153|I1L153_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0244500 LjG1.1_chr6 55718026 55723298 +
2 domain predictions
1 GO term
LotjaGi6g1v0244500.3
n.a. Allantoate amidohydrolase; TAIR: AT4G20070.1 allantoate amidohydrolase; Swiss-Prot: sp|O49434|AAH_ARATH Allantoate deiminase; TrEMBL-Plants: tr|I3SAX9|I3SAX9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0244500 LjG1.1_chr6 55719002 55723024 +
2 domain predictions
1 GO term
LotjaGi6g1v0244500.4
n.a. Allantoate amidohydrolase; TAIR: AT4G20070.1 allantoate amidohydrolase; Swiss-Prot: sp|O49434|AAH_ARATH Allantoate deiminase; TrEMBL-Plants: tr|I3SAX9|I3SAX9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0244500 LjG1.1_chr6 55719959 55723024 +
2 domain predictions
1 GO term