Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0247400 |
| Transcript ID | LotjaGi6g1v0247400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transcription factor GTE1; TAIR: AT2G34900.1 Transcription factor GTE6; Swiss-Prot: sp|Q84XV2|GTE1_ARATH Transcription factor GTE1; TrEMBL-Plants: tr|A0A0S3RIF5|A0A0S3RIF5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0247400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:55951460..55959530) extracted from Lotus japonicus Gifu genome v1.2.
AATAATCTCGACTTATTATTATAAACGCTAAGTAAGGTTATTACATAGGCACACCCAAAAACAAAAACAACTTAGGATAT AATTGGGTATGCACGTAATTTGGTTGGAATATGAAGGTTTGATTGGTTGGAGCCTTGGAATTATGCATGGTGTGTGTGCT GGAATGGTGCCTGCAGAGTAATAAAAACTTTATTTATATGTGTGGAGCTTAATTTGGAGAGACAAGTGGCTGGGTCAGTT GCATTGAGTTCGACTTTGATAGTTTGATTAGTTAAGGTTAAGGAGCATACCAGAGAGACAGAGAGCACTGATACTTGCAT AACACAAGAGACATGGGGTACTGGAAATCTAAGGTTCTTCCCAAAATCAAGAAGGTTTTTGAGAAAAACGGTGCAAAGAA AACTGCTGCTGCTGAGGCCACCAAGTCCTTTGATGAGTCAAAGGTATGTTGTGTACATATTCAGTGTTTGTTTTATGTTT AAACTTCTTTATATCTGTTGAAAACAAACAGCATCTCATGATGTGTTCTTGTATGGTGTTTGGTTTAGGAGGAGTACAAT AAAGTGTTTGAAGAGAAGAAGGTTGAACTTCAAACAAAAGTAATTGAAATATATGAGGCTTCACCAGCTGAAATCAAGGT GAGAATACATATATTATCTACTAGAATTGCTAGAAAAAGAATCACAATTATTGATTTACAAGGCTCCTGTTTAAAATTTT CAGAGTTTGGTTAAGGAACAAAAGGAAGCAGGGCTAAAGAAGAACCCCACAGAAGTTCACAAGTTCCTAGAAGAGCTTGC TAAAATTGGTAACAATTTTTGTAGCCTTTTTTTCCTTCCTCTTGTTGATATTTGTACTATACTTTTTATTTACATGATGT TTCAACTTGGATCTCTAGTATTGATTAAGTGCGTGTTTGTAAATCATTCTATAACTGATTTTAATTAAAGTCAAAATTAA TTCTCGAGAACAGCTTCTTTAAGTAGCTTCTCGGTGTTAGAATTGAATCTGAGGAAAAATAAACTTATACATCTTATTGG CTTCAAATATATTTCAGAATTCCCTGGATCAAAGGTAGTATCTGAAGCATCATCCAAGTTTGGACCAGCCTTGGTTCCAG GTCCAGTTCTCTTTGTTTTTGAGAAGGTGTCCACTTTCATAGTTACAGAAGAGAAAGTTGAGGCCCCTCCTGCAGAAACT AAAACAGAAGAAGAAGCAAGCACTACCAAAGACAGAGAGATAGTGGTTGAAGAGGAGAAAAAGGAAGAGGAGAAACCACA AGTAGCAGAAGAGACAACTGAGAAAGTTGAATCAGAGCCACCTAAAGAGGAAGAGAAACCTGCTGAACCAGTTGTAGCTG AGGCTCCTCCAGCTGCTAAAGAGGAAGAGAAACCTGTTGAACCAGTTGCTGAAGTTGAGAAAACAGAACCACCAAAGCCT TGAAAATCTCCTTCATAAGTTTGATGCAGATACATATATATGTGTATTAGTTTGCATATACTCATAAATTGTTACATACC AATCTCTCATTCTTTTATAATTTATTTGAGTTGCTTAGTTTGATGTTGGAATTAATGTGCATGTGAATGTGAATGTTTAC CTTAAAGACATGAATCATATTGTAATTTTCATATTCTTTTTTATGTCAAGGAAGTGACTTGGATTGGATCATTTGGTTCA TCCAATCTTTCCTCTTGTTGTTTCAATTAAAAGTGATCAATTTCATATCCTGTTTGGCTGGATTTTATTCCTTTTGCTAA TTTGCTGCAATGCAAGGTTTCATTTCACAATACATTCATGTACACTGGACATACAGAACACAGTAATATGTGCATAAATG GATGGAAAGCTCAACAAATTTGCAAAAGGTGAGTAGCAGATTTTTTTTTTTAATTCATAGGAACAGCAAGCATTAATTTT GAAAAGTTGATGGTCAAATCTGTTGCGTCAGTGACTCAGTTTTGGAGACGTGTTAATTGAGCTAACAGAATAAATAAGTG GATAATATCAAAATCAATATCAATCCAAAGGAGTCTTAGAACAAAACTCTTTTGACATAACATTTTAATTAGAAAAACAA CCCTTTCATTTTACTAAAATAGAATCCTAAATTTCTAAGACAGTGCAAATGTGCAATGTTGGATTTCCAAAGAGATAGTT TTTTTTCAAGTTTCAATCAAATCATTAACAATAAAGTTTGGTTCATTAAACGTCTGGGAATTTAGAAATCATGATATTGT TGGATATTTTATGGATTAGCATTAATCATTTAATTAGAATGTGTAATTATTAAATTATTAATATATCAATTATTAGAAAT TAATATTAATTATAACGCTTAACCACCTGATGAATATTATTATTGAGCTTTTCTGATGAGTAACCCGTAATGGGTTGGGT TATTTATTTAAGCCTTGTGAGAAGCCCCTGCTCTCATCTGATAGGTTATAAACTTGTCTCCCTATTAGACAGTTAACCTA ATCAGACTTATAAGAATAGAGAGCAGTTTTTCTCACCTAGGCTCAAAACACAAAAGGACTGATTCTTCGCTCATATCAGG TACGCAAATTATATATGTATAAATTATTGAACATGCTATAATTTTGTATCTACCTCCTATCTAGGCTACCCTTATAAATT TCCTGCAATGGGTATCAGAGCCTAGTAGATACAGATTATGGCTGTTTTTCTCATCAAACATCGTACACGTTCAATTTCGA TCTAGAAAATCATGTGTGCGTCTTTTTTGAAATTGTTTGAGGGGTTTTGTTCCTCTATGGTGTGCAAATAGTATACTGAA AATTCATGAGATTTTGTTATATGATTTGCGAGAATTTAGAATTTTTTGTTCTGGGTTTCAAAAGTCCTAGAATTTTGATC TGCTAATGCTCTCTGTAGTACATGATCCCGAGAATTTCTTGAGGGATTTTACTCCTTATACCCTTGTGCCCAATATGCCT TAAAAACTCTCCCTGCCATAATCTATATAGAGAGATCGAATTGAGCACTCTTTCTGGGTTAATTGCAATCCGGTTGCATA CTGATATTATCATTACTGTATCCATTGACTTGGACAAGTTCAGATCTTCAATTACAATAATAAGGGCTATAAGGTGCCTT CAAATCTTTAATCCATACGTCCCTGTGCGAGTACCTGACTTGTATTCCATGTGTGGCTATATGATGTATGCTAGATGGGA TGTGACATGTATATGGTAATGTCATTTATGTATGATAATTTGAAATTGTAATTTATTATAATTATAAATTATTTTTAATA TGAATTTATTAAGTTTCAATATACATTCTCACAAAATTGTCGAATTTCATTGGGTTTAGTCAGAAGGATAATGTCAGATT CTTTACAATAAGTTATTAAATCTTTTCTATTTATTTATTATATAATTGCATATATGGGGATTTTTTTTTAATTAGATATA TTCTCCTATTATGTTTATATTATTTAGCTGTGCAATTATGTATGAATGTGATATTCTCCCAAAATACTTTGGAACTCTAT AATTAACTCATTATTATTTAAGCATTGTAATACTTTGTTATTACTTTTTTTTTATATTAAAGTGGTAGTTAAATTTGAAT ATATGATATGACTACCACATTCTTATAAATCTTACTATGTGAGTTTCATGTTGGGAATTAAAATTTCCTCATATGCATTT AAATAAATAAAAAAATAAAATAAACAATGAGCTTAGTTACAGGCTTATAAACCTAAAATTTTAGACAATGAAGTTCCTTT GCTAGCAATACTTTTTACTATATATAATTTTTTTTTGCTAGTATACTCTATTTGAGTTTCCTCCTTTCGCAGAACAATAC ACTACTAGTACTCTTTGTACCCTAATTTTTTCTTTAACAAATGTATTTTCACAGTCGATAATTGTGAAATTAAATTCTCA TTTTACCGTTAATGTATTAAGCAGTAGAAAACTAACCAATGAGTTTTTTTCATTTATATATGTTTCACCCCAAATTAATT TTTTTTATAAGAGTTGATTTAAACTCCAACCAATACCCCTTATATACCTTATGATTGAATTTTTTTGCTGACAAGAAAAA GTACCATATTTTTTCTTAATTGATTATTAATTAATGGAGATTTACATTTTACTTAATTTCTGTAGTCAATATTACAAAAT GTATTTAATCAAAGTGGGATACTTTAAAACAATTAACTCAGTGGTAAGAGCATATGACATATGAATTGTGGGAGGTCCAA GGTTCAAACTTTGGAGAATGGAGGGTGTCATTCATCTTTCAATGTAAAAAAAAAACAATTTGTTATTAGCAATATAATTT TTTGTGAAGATATTCCCAAACAAAAAATTATAAAAATCTGGATGGTAATCTAGAAATATCATAATAAAATATTATAGATC TATATTTGATATTGATTGCTTTAATAAAACACCAAATATTAAAAACCAAAAGAACAGGTTAATTTTATAATCCTGATTGA CCCAAGCCCACTATCACTTTTTTGTTTCATTAGAAATTGTCGAAGTCCTTCCATCGTCCACGGGATTTTATTTTGCTTCT TCAAGAAACCGTTACTACAAAGTCGCATACATTGGAAAGCGACATCACTAGAAGAGAACAAAAATTCACTTCAACAATTA TTATCAATGGATCCAAATTTTGGTGCATCTTGTTCCAATGTCACGGAGGAAAATTTGAACCGTTACAGGCATTTTGTCAA TGAAATTCTCACCAAAGTTCAAAGGGTGAGTTCTTGTTCTTGTTACATAATTCAAAACTCTATATTCTTGAGATTATATT GTGTTCATAATGTCCAATTTGATAGTTTTATTATCTTTTGTCAATTTGTCATTAACCTTTTCTGATTGTAATTAATTGTG CTGTCAAAATTCAATTGGGGGACTAAGGAAATATTTGAATTGAATGAAGACAAAAAAATAATGGATTGTTGGAAAGTTTA ATTTTTTTGTTTTCTTTAAAACAAGATACAGATTAATCAAGTATGGCACTTTCTCTTCCTCTCCAATTTGAGTGGAATGA GACTTGTTTCTTGATTCTAGTAATTAAATTTTTGAATAGTAGAATGATAAGTTTATTTGTGTTTGGTGTTGAATGCAGCT TGAGAAGCAAGTTAATGAGGTTGAACAGTTCTACAATCCCACTGATGGTGTTCAAGTTAATCATTACAAAGGGAGGGGGA TGCATCTTTCTGGCACCAAGAAGTCAATTTTACAAGGTGGATCAAGTAGGGAAGTTCTGGGAATGCAAGAGCTCATGCAC CGGTTTGAAACAATATTGGATGAGGTACATGCAAGTACCTTGCAGCTATTTTTAGTATTTAAGATGCACTTGCGGCTGCG TTGCGTAATTGCGGGTTGATGCAGTCCCAATTGCGGTTACAATACCGTTGCGGGGACTCCAAAAGCATTTACGTTGCATT CGCAGTTGCGCTTGCAGACCGCAATTTAAAATCTTAATGGCTTCCCTTTTGCGTCGAGTCTTGTGGATTGAATCATGTCT TTCTTCTCAGATAACTCAGGATAGATGGGCTGAACCCTTCTTGGAACCTGTAGATGTTAAGGGTCTTGACTTGTATGACT ATTATGAGGTACTCTCTTTTTTTCTTTTTTCATTCTAAAGATTTTTACAGTCTTTATTTTATCTTAATTACTCAAGTGAC ATTTGAAATCAATCTGCTATACTTCAGGAAAATAAAAATGGTCTACATATTTGTTTTGTCAGTATTTCTGCTCAGCCTTT TTTGGCTTGCTAACCATCTATCTTATATATCAGAGTTCTTTTTGCTGTTTTCTTCTAAAAATAATGTCTTTTTAACTTCC CCTAGATTATTGAGAAGCCTATGGATTTCAGCACAATAAGAAGAAAAATGGATGCCAAGGATGGCTCTGGTTATAAGAAC GTGCGGGAGATATATTCTGATGTCCGGTTGATTTTTAAGAATGCAATGAAATATAATGACAGAAAACATGATATCCATGT TATGGCGAAGAACTTGCTGGAGAAATTTGAGAAGAAATGGCTGCAACTTTTGCCTAAAGTTGTTGAGGCGGTAATTTTTT TTCCCTCTCAAAATATTTTTCATTTAGGATAAATGAAACTTTCTGATATATGATTTCTGTTGCTGCATTAATAGAAATAT GTGTAGTTTCAGTCACCTTATGTAATATTTTACCATATATCCTTGGTCTTTCTGTATTTGGTTACACTCAGGAGAGTGAA AGATTAGCGGAAGAACGGTTGAATGCACACATTGCCCAAGAAGCCAATTGTGCCAATATGGCTAGGGAAATAAGCTTTGA GGTTGGTTGATTATTTTATTGCTAGAATTGTTTTTAAAAATCACTTGCATTACATTACTTGGAAAGTATATTAATGCTTT TATGGTAACCTGATGTTTCAGCTAGGTGAGGTTGACACAGATTTAAAGAATCTCAAAGCAATGGTGATTGAAAATTGCAG GTTTGAAAGAACCATCCTATATTATTTAGTGATCAAGTCAAATTGCAATAAGCAAATGTTACATGCCATCTATTTGCTTG CTATCCTGTCTTTAACACTGAAGTTTAAATCTTATTAGAATCTTGAGACTTTGTGATTGAGATTGAACTCAAAAGATGTT CAATCTAATTAACATTTCACAGCGATGAAGCAAACAAATTTTGTCTTCTAGACAGTATTTTTAGGAACTTTAATTTCTCA TGGAGTTTATTGAATTTTTAAGTGCATTAATTAGCTTGGTGTGCAAACTAATGGGGGTGTAATAGAAAAAAATTCATGTA ACTAGATTTGGACAACAGGTCAACAAGTTTTGGATGTAAGTATTGACAAGTTTTCCTATTGTGGCATGTATTAACAATCC ATTCGACGCTAAAAAGGTAAAAGTCGAAGCTACAGTTGATTTAGTTATGGCTTAGCGCTGGCGTCATGACTCACATTAAA TTGCTTGAAGGTAGTATTTCAGCTTCGGTCCAATAGACCGACGCTCTCGCTCTTCACTTGTGCGAACGGCCGACGGTAAT GATTTAAAGTTATAGCTAATCGGCTAATGAGGTAAAAGCCGACGGCCATAGCTGATTTAGTTAGGGCTTAGCGTCGGCGT CATGGAATTTTAGGGAGAGTGTTGGTTCTCTTGATTAACCAGTAATTGTGGTTCATAATTGTGGTTCATTGCTTATTCTT GAATAACAAAACATTTTTCTTCTCATTCACCGCTGTCCCTATCAGTTTTGGTGACTCATTTTTCTTCTGTTGTTGACAAT ATCATAGGAAACTGTCAGCTCAAGAGAAAGTAACGCTTGGGACAGCTCTCACCAAATTGTCTCATGAAAACCTCATGAGG GCAATGCAGATAATTTCTGAGAACAACCCAAACTTCCAGCCAGATGTTGAAGAGGTGAACCTTGACATTGATGCTCAGGT TTGTGATCTAATTGTTACCTATAGCTACTAATGCAGATAGTTTCTGTTGTTGAATTTTTTTGTTTTGTTTTGCAAGTATC TTCTAGCTACTCACCAATTTTACTACTACTATATACAGAGTGATTACACACTGTGGAGATTAAATATTTTTGCTAAAAGT GCACTAGAGGTTCAAGGAAGAACACATGCAGACACAGTTGCTAACCATAACAGTAATGTTGAGGAGGAGGAGAGAAGCAA CAAAAGGAGGAGAGTTTAATGGTTCCTGTGTCAAAGACACAATTTTGATCTGGAGCATTCTGATATACTTTTATGTGTTT TTACTTGGTGGTGATTGTTGGTGGTGATATGATTTTTGTTCTTCAGTTTTTTGTGATATAGAGTATGCAAGTCTGGATTT TTTTTTGCACAGGTGGTGCTTTGTTATATTGTTCTGATTAGGATTTGATTATACTTGGTTTATAGATGTCATTTGGCTTG GTTTCAGCCATTAGTTTAATCTCTTTTAGTGGTAATAAAAAACCATCTTCTGCAAATTATCCCTTCTTTTGTACAGCCAT AAAAATGATCAACCATATATCTTAGTTGCTCAATTCATGACCAATTTTGTCCAACTTGACTTAGCATATCT
CDS sequence (LotjaGi6g1v0247400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACACTGGACATACAGAACACAGTAATATGTGCATAAATGGATGGAAAGCTCAACAAATTTGCAAAAGAAATTGTCG AAGTCCTTCCATCGTCCACGGGATTTTATTTTGCTTCTTCAAGAAACCGTTACTACAAAGTCGCATACATTGGAAAGCGA CATCACTAGAAGAGAACAAAAATTCACTTCAACAATTATTATCAATGGATCCAAATTTTGGTGCATCTTGTTCCAATGTC ACGGAGGAAAATTTGAACCGTTACAGGCATTTTGTCAATGAAATTCTCACCAAAGTTCAAAGGCTTGAGAAGCAAGTTAA TGAGGTTGAACAGTTCTACAATCCCACTGATGGTGTTCAAGTTAATCATTACAAAGGGAGGGGGATGCATCTTTCTGGCA CCAAGAAGTCAATTTTACAAGGTGGATCAAGTAGGGAAGTTCTGGGAATGCAAGAGCTCATGCACCGGTTTGAAACAATA TTGGATGAGATAACTCAGGATAGATGGGCTGAACCCTTCTTGGAACCTGTAGATGTTAAGGGTCTTGACTTGTATGACTA TTATGAGATTATTGAGAAGCCTATGGATTTCAGCACAATAAGAAGAAAAATGGATGCCAAGGATGGCTCTGGTTATAAGA ACGTGCGGGAGATATATTCTGATGTCCGGTTGATTTTTAAGAATGCAATGAAATATAATGACAGAAAACATGATATCCAT GTTATGGCGAAGAACTTGCTGGAGAAATTTGAGAAGAAATGGCTGCAACTTTTGCCTAAAGTTGTTGAGGCGGAGAGTGA AAGATTAGCGGAAGAACGGTTGAATGCACACATTGCCCAAGAAGCCAATTGTGCCAATATGGCTAGGGAAATAAGCTTTG AGCTAGGTGAGGTTGACACAGATTTAAAGAATCTCAAAGCAATGGTGATTGAAAATTGCAGGAAACTGTCAGCTCAAGAG AAAGTAACGCTTGGGACAGCTCTCACCAAATTGTCTCATGAAAACCTCATGAGGGCAATGCAGATAATTTCTGAGAACAA CCCAAACTTCCAGCCAGATGTTGAAGAGGTGAACCTTGACATTGATGCTCAGAGTGATTACACACTGTGGAGATTAAATA TTTTTGCTAAAAGTGCACTAGAGGTTCAAGGAAGAACACATGCAGACACAGTTGCTAACCATAACAGTAATGTTGAGGAG GAGGAGAGAAGCAACAAAAGGAGGAGAGTTTAA
Protein sequence (LotjaGi6g1v0247400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYTGHTEHSNMCINGWKAQQICKRNCRSPSIVHGILFCFFKKPLLQSRIHWKATSLEENKNSLQQLLSMDPNFGASCSNV TEENLNRYRHFVNEILTKVQRLEKQVNEVEQFYNPTDGVQVNHYKGRGMHLSGTKKSILQGGSSREVLGMQELMHRFETI LDEITQDRWAEPFLEPVDVKGLDLYDYYEIIEKPMDFSTIRRKMDAKDGSGYKNVREIYSDVRLIFKNAMKYNDRKHDIH VMAKNLLEKFEKKWLQLLPKVVEAESERLAEERLNAHIAQEANCANMAREISFELGEVDTDLKNLKAMVIENCRKLSAQE KVTLGTALTKLSHENLMRAMQIISENNPNFQPDVEEVNLDIDAQSDYTLWRLNIFAKSALEVQGRTHADTVANHNSNVEE EERSNKRRRV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 78 | 407 | 330 | 6.1E-130 | – | |
| PANTHER | 78 | 407 | 330 | 6.1E-130 | ||
| Coils | 92 | 112 | 21 | - | – | |
| Gene3D | 132 | 273 | 142 | 2.5E-36 | ||
| SUPERFAMILY | 133 | 263 | 131 | 1.31E-33 | ||
| SMART | 146 | 259 | 114 | 4.5E-33 | ||
| Pfam | 158 | 244 | 87 | 1.6E-18 | ||
| ProSiteProfiles | 165 | 240 | 76 | 18.888 | ||
| PRINTS | 168 | 181 | 14 | 5.9E-14 | ||
| PRINTS | 184 | 200 | 17 | 5.9E-14 | ||
| PRINTS | 221 | 240 | 20 | 5.9E-14 | ||
| ProSiteProfiles | 306 | 387 | 82 | 16.163 | ||
| Gene3D | 310 | 386 | 77 | 1.0E-12 | ||
| Pfam | 315 | 377 | 63 | 1.3E-15 | ||
| MobiDBLite | 387 | 410 | 24 | - | – | |
| MobiDBLite | 394 | 410 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi6g1v0247400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…