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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0247700 |
| Transcript ID | LotjaGi6g1v0247700.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sucrose nonfermenting 4-like protein; TAIR: AT1G09020.1 sucrose nonfermenting-like protein; Swiss-Prot: sp|Q944A6|SNF4_ARATH Sucrose nonfermenting 4-like protein; TrEMBL-Plants: tr|I1L118|I1L118_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0247700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:55980355..55985712) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTCAGTCAGAGCATGGATCCTGCAAGGGGTGCTAGTGGTGTTGGAGGGACTGTGTTAATTCCCATGCGGTTCGTGTG GCCGTACGGTGGAAGGAGTGTATTTCTTACTGGTTCTTTCACAGGGTGTGTATTTTGTTGATTGCTATACATGGATATGT TAATTTTTGTTTGCTAAAATGCTCTAGTTTTAGGCTTGTTTATGTCTGTTTGTTTCCTTTTTTGCTCGTCTATTTGATGT AAAATTTTTCTTTAAGGTGGTCTGAACCTCTACCAATGTCGCCAGTCGAAGGTTGCCCAACTGTGTTTCAAGTTATTTAT AGCTTGCCTCCTGGTTACCATCAGGTCAGTTTATGATTGTGTTATACTGTGTTTTATTGTTGGATGGTGATTGAGTAGAC CTGTAGAAGTTTCATTGTGTTTCTACGTTTATATCTATGTTTGTTGGTTTGGGATAAGATAATTTCCATTGACAATTTTT GAGAGAGATATTTGAGTAGAAAGGCATTCATTAATTGTTTGGCTTCTGAGGGTAGTAGCCGACTAGCTCTATATTTCTGG TAAATAGTAACAAATATGGAATTCATGGTTTAATAGGAAAGTGTAATGGTTTGAGGTTATTTAATAGGTTTTAGCATTTT CTTAATTTTGAAGTGTTATTTTGTTTTCTCAATGGTGATTGTTATCTGAGCTTGAGCAGTAGTATACTGCGTATGTTTGA GGTTGCAAGTATCTGATTATGATGTGCTAAGGTGGAATCTAAAAAAATATGCTTTTGAGAAAATTTGGCCTTTATTCTTG TTGTCTGGGTACATAATTACTTACTTTGAAGTTGCTTGAATGCAGTACAAGTTTTTTGTTGATGGAGAGTGGCGGCATGA TGAGCATCAACCTTGTGTACCTGGAGATTATGGGATAGTCAACACTGTCTTATTGGCTACTGATCCTAACTACATACCTG TTATAACTACAGATGCAGCGTCTGAAAATAACATGGATGTGGATAATGAGGCTTTTCGCCGTATGGTAAGATATGGCTGC TCTATGTGTGCTGCTCTTGCCTAGGTTGTACTTTTGAATGATATTTTCAATGAAAATGTTGATACAGGGATCTTCTCGAG TCTGGAGAATTTTTCTAGCTCATCTTAGAACTCCTAAACCCATCTATTTATTATGGCCTCTGAATCCTGCAATATTTATC CCAGTGTTATCAAATAGTTTGGCTAATCGCGATGCCGCTATTGCCCGCTATTCGCCGCTAAATAGCTGCCGAAATAGCGG ATTTTTGGCTCACCGCGATCGCGATTTGACAACACTGATTTATCCATGTAGGTTTGTTGAGTCTTATATTTGGAATCAAA ATAAATATAACCTTCCTGATTGTCTTATTTGTCATAAGTGATACCCTGGTGGCTTACAATGTCTTGTTTCACATGCTTGT TCTGTTGCACTTTTTAATATGATGTCTGCTCATGTATAAAATGGCATCTTGTATATTTGATCCTTAAATTTAATTGTTCC AACATTAAATATAATATGTTGCTTGCTTTATAGCAAATCCGGTTGACAGATGGTACATTGAGTGAGGTGCTGCCAAGAAT ATCAGATGCTGATGTACAGATCTCCCGTCAACGTATTTCTGCATTTCTATCGATGCACACAGCTTATGAATTACTTCCTG AGTCAGGCAAGGTACTAATGACCCTGACCCTTTATTTTGTTCTTTGTGAGTTTCTGTCATGAAATCGACAAAACATGAAT TACAAAATTAATTTAGTGACTCCTGGGCACAGGTTGTTGCCTTGGACGTTGATTTGCCAGTGAAACAAGCATTTCATATA CTGCATGAGCAGGTACGGTGTTTTTTTTTCTGGTAGACTAAACTTTGCACAACTTTTTTCTCTCCATATATTGAATAATG TTTCTAAAATATGTATGATTACTGTCACATCTATCGTGTTATAGTTTTAAGACTTTCTCTTCATTTATCGTATTATAGTT TTCTCAGTTTTAGTGTTGTTGCATCTTCATCCACTGCAGATTAAAGGTTTGCATATGCAGTTTTTCTGATCTGGATAATT TACAGGGAATTTACATAGCTCCTCTCTGGGACTTCAGCAAGGGGCAATTTGTTGGTGTTCTTAGTGCTGTGGATTTTGTC TTAATTTTAAGAGAGGTATGTGTCTTATATTAACAGTTTTGCTTCAATCTTATACAGAACTGCCTGTAAAGTTCAAGTGT TCACACACACACACACACACAGATATATATATATATATATATCTGTTATATATATATCTGTATGTATGTATTTATATATA TATTACTTTGCCGTGCTTGTTGAAACTTATTATCGCCCTATTCTCAGCTGGGGAATCATGGATCCAATCTGACAGAAGAG GAACTTGAAACACATACCATATCAGCTTGGAAAGAAGGAAAGTCATATCTAAACAGACAGAACAACAGACATGGAATTGC ATTATCAAGACTTTTTATCCATGTAAGTGTTTTGTATGTGACATACTAACAATGTTTATCCATTCATGTGGTTCTGTATG TCTTTAGAATGCGATAAGGCTTGTATTTTTCACTACTTGCAGATTACGGTGTGTAATATATGTGTGCATGCGCGAGAGTG TGTGTGCGTGTGTGTTTATAAAGATGCTTAATGAGCATGTTTAGTTAATTATAGATCCACAATTTTGTAAAATTCTCCCT CTCCCTGGGTACGTGTAGAATGGTGTTTGCAACAAGCGTAAATTCACTAAGCTGTTAGGGTGACTTAGGGAACACATGGC TTATGCAAAGGGGAGGAAATTTTGTTCTCTATAATTGTGATGATACCATGATCCTAACTGAGTATATATTAGCAACATAT CAAGCATTGGCTTGTATAAATGTTTTATCAATCATTTTCAAGTATTACTATTATTATTTAATACCCATCCCATTTACCAT GCTCTCATTTCAGGCCGAGAAGAAATTGTGATGTGTCCGAGTAATCTTCCTTAAAATCTATCTTGGTCTTGGCTTGTATA AATGTTTTATCAATCATTTCATGATTGAATGAGTTTAACCTAAGAATGCTTAAGTGAAACAATTTTGGGTCCTGCTTCTT TGTTTATGCCATAGTTATCGATAGTGCGCAACAGCGGCACTTTAGCGCTGTCTCGTAGTGTAGCTGACCCCTGCCGCGAC GGGATTGCGGCTGTGAAATCCTGCTATTCGCAGTCAATAGCGGCCTTCCCTTTATGGGATTTCATTTTTGGGGGTCATCC GCGACAGGCTGCGATCCGCGATTGACTACTATTAATGCTTTAATATAAATGTGTCTCTCTATTGCACTAACTGCACTATT AGTTCACTTGCTATGTTTGACTTTTTGGATATTTGTTTATGATGCAGGCAGGGCCATATGATAACCTGAAAGATATTGCC ATGAAGATCTTGCAAAAGGAGGTTTCAACAGTTCCTATTATGCATTCGTCTTCTGAAGATGGTTCATACCCACAGTTACT GCATCTTGCTTCACTTTCAGGAATACTTAAATGTAAGATTTTATGATATTTTCTTTATATTGTTATTAAATGTTCTTTAA TCTTACCAAATTGATTTTTCAGGCATTTGTAGGTATTTTAGGCACTGCTCTAGTTCATTGCCTATACTTCAATTTCCAAT CTGTGCAATACCTGTGGGAACGTGGGTACCTAAAATCGGGGAATCAAGTCGGCGGCCCTTAGCAATGTTGAGACCAAGCT CTTCTCTTGCTGCAGCCCTAAATTTATTAGTTCAAGGTGTGAACTTTTTGTCTGACCTTGAACATAGTGTATCAAAAAGA AAAGCAACAGAGAGAAAGAATGCAGAAATTGGTATCCTATTTTACTTCTGAGGTATTAGGCTGATGATAGAGGGCTCTGT CTCCGACTTTGAGAAGAATGTTGCTTTGTGATTAATTATTGAAAGAGAGCTTAAATTTATGGGGTGATTCGTTTTGTTTG TTTCAAGCATCAAAATATAAAATATGTTTTTGCTTTTAATATGACTATAATTATACTTAAATTAGTTCTTGCCCTTTGTT TTGCAGCCGAAGTTAGTTCAATACCAATAGTTGATGATAATGACTCATTACTGGATATATATTGTCGGAGGTATGTTATT TCCTACTATATCCTCAGTATTAGACTTCATAGTGCCTTGTTTGAAGTACTATAAAGCCAATCTATGGTTCAAGTATTTCA TTCTTTGCAGTGGCTTCTAAAAGCTTCTAATTTTCCCTCCCCGCCCTTCTTTATTTGTAGTGACATAACGGCTTTGGCAA AGGACAGAGCATATTCTCACATCAATCTTGATGAGATGACTGTTCATGAGGTAAGTTTGTTTTTCATTTTTGCATACCAA TTAACTTATGAAGAATTATATTTTGAAAATTAAAATACATGTGTTCTGATTTCATCTTTTGCTTATTAATCCAGATAAGC AATTTCCTTTGTTGTTGAAGTACCTCAGTCTTGTATGGCAAATGATATTTGCACAGCTGCACATAGCTTTTGTTGTTGTT GTTGTAGCATAGCTGCACAAGGGGTCAATATGTTTGTGTTTTGTGAACTTTTTGCATTTTTGTTGTCTTGATTGATCTTT ATTATTATTATTTTTTTGGGGGGGGGGGGGTGAGGAAGGAAGATTTCAATTTAAATTGCAATGTTACTGTTAGTGCCATT TTCAGTCTGTAGTCTAAGGCAAGGTTACAGAAATATTCATGAGGTCCATTTTTTATTTGGTGATTTTCTTCTTGGGATCT CAGTATCTCCTTGCATGCTTTATTGTCCAGGCTTTGCAGTTGGGCCAGGACGCATATAGTCCGTATGAACTCAGAAGTCA AAGATGTCAGATGTGCTTACGCTCTGATTCGCTGCAAAAAGTCATGGAACGGTTGGCAAATCCAGGTGAGCTTGTTTTGT CCCCCTCCCTCCTCTTTTTCAGACGACGCATGCCATGCGGTTTCATAATTGTTTTAACTGTCTGATGGGGTGACATTCAA GGTTGCTTAATGTTAGTTTTCGTTCCGTGGGGTTGTCTTCCTGAGTTAGCCTTCAGTTCTTGTCAACATTCATTTGGATC TTTCTGTATTTTGTAGTTTGTACCCACAAGTTTTAATTGAATAGGGAGGGTGTATAATTATTTTCAGATATCCATTGACT TCATTTTGAAGATTGTGATGCTGGAATTTTTGTGATCTCTAATACAGTAATACTTGATTGACTCAGGTGTGAGGCGGCTT GTTATTGTGGAAGCTGGCAGCAAGCGTGTAGAAGGCATTGTTTCATTGAGTGACATATTCAAGTTCTTTCTTGGTTAG
CDS sequence (LotjaGi6g1v0247700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGTGGATAATGAGGCTTTTCGCCGTATGCAAATCCGGTTGACAGATGGTACATTGAGTGAGGTGCTGCCAAGAAT ATCAGATGCTGATGTACAGATCTCCCGTCAACGTATTTCTGCATTTCTATCGATGCACACAGCTTATGAATTACTTCCTG AGTCAGGCAAGGTTGTTGCCTTGGACGTTGATTTGCCAGTGAAACAAGCATTTCATATACTGCATGAGCAGGGAATTTAC ATAGCTCCTCTCTGGGACTTCAGCAAGGGGCAATTTGTTGGTGTTCTTAGTGCTGTGGATTTTGTCTTAATTTTAAGAGA GCTGGGGAATCATGGATCCAATCTGACAGAAGAGGAACTTGAAACACATACCATATCAGCTTGGAAAGAAGGAAAGTCAT ATCTAAACAGACAGAACAACAGACATGGAATTGCATTATCAAGACTTTTTATCCATGCAGGGCCATATGATAACCTGAAA GATATTGCCATGAAGATCTTGCAAAAGGAGGTTTCAACAGTTCCTATTATGCATTCGTCTTCTGAAGATGGTTCATACCC ACAGTTACTGCATCTTGCTTCACTTTCAGGAATACTTAAATGCATTTGTAGGTATTTTAGGCACTGCTCTAGTTCATTGC CTATACTTCAATTTCCAATCTGTGCAATACCTGTGGGAACGTGGGTACCTAAAATCGGGGAATCAAGTCGGCGGCCCTTA GCAATGTTGAGACCAAGCTCTTCTCTTGCTGCAGCCCTAAATTTATTAGTTCAAGCCGAAGTTAGTTCAATACCAATAGT TGATGATAATGACTCATTACTGGATATATATTGTCGGAGTGACATAACGGCTTTGGCAAAGGACAGAGCATATTCTCACA TCAATCTTGATGAGATGACTGTTCATGAGGCTTTGCAGTTGGGCCAGGACGCATATAGTCCGTATGAACTCAGAAGTCAA AGATGTCAGATGTGCTTACGCTCTGATTCGCTGCAAAAAGTCATGGAACGGTTGGCAAATCCAGGTGTGAGGCGGCTTGT TATTGTGGAAGCTGGCAGCAAGCGTGTAGAAGGCATTGTTTCATTGAGTGACATATTCAAGTTCTTTCTTGGTTAG
Protein sequence (LotjaGi6g1v0247700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDVDNEAFRRMQIRLTDGTLSEVLPRISDADVQISRQRISAFLSMHTAYELLPESGKVVALDVDLPVKQAFHILHEQGIY IAPLWDFSKGQFVGVLSAVDFVLILRELGNHGSNLTEEELETHTISAWKEGKSYLNRQNNRHGIALSRLFIHAGPYDNLK DIAMKILQKEVSTVPIMHSSSEDGSYPQLLHLASLSGILKCICRYFRHCSSSLPILQFPICAIPVGTWVPKIGESSRRPL AMLRPSSSLAAALNLLVQAEVSSIPIVDDNDSLLDIYCRSDITALAKDRAYSHINLDEMTVHEALQLGQDAYSPYELRSQ RCQMCLRSDSLQKVMERLANPGVRRLVIVEAGSKRVEGIVSLSDIFKFFLG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 17 | 371 | 355 | 1.9E-215 | – | |
| PANTHER | 17 | 371 | 355 | 1.9E-215 | – | |
| Gene3D | 28 | 212 | 185 | 5.0E-47 | – | |
| SUPERFAMILY | 38 | 208 | 171 | 6.76E-26 | – | |
| CDD | 47 | 196 | 150 | 8.88331E-42 | – | |
| ProSiteProfiles | 51 | 113 | 63 | 9.727 | ||
| SMART | 57 | 106 | 50 | 0.08 | ||
| Gene3D | 229 | 371 | 143 | 1.9E-36 | – | |
| ProSiteProfiles | 235 | 298 | 64 | 9.609 | ||
| SUPERFAMILY | 236 | 370 | 135 | 2.07E-21 | – | |
| Pfam | 237 | 283 | 47 | 4.8E-6 | ||
| CDD | 238 | 370 | 133 | 4.63163E-43 | – | |
| SMART | 239 | 287 | 49 | 6.7E-5 | ||
| ProSiteProfiles | 317 | 371 | 55 | 8.816 | ||
| SMART | 321 | 370 | 50 | 0.012 | ||
| Pfam | 324 | 370 | 47 | 6.0E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0247700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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