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LotjaGi6g1v0259600.1

Overview

Field Value
Gene ID LotjaGi6g1v0259600
Transcript ID LotjaGi6g1v0259600.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Protein phosphatase 2c, putative; TAIR: AT3G17090.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q0V7V2|P2C42_ARATH Probable protein phosphatase 2C 42; TrEMBL-Plants: tr|G7IMT1|G7IMT1_MEDTR Serine/threonine phosphatase family, 2C domain protein; Found in the gene: LotjaGi6g1v0259600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:57239353..57244656) extracted from Lotus japonicus Gifu genome v1.2.

ACTCAATAGTGAAGTGAAATATAAAAAGAAAATTGTTAAATTAAAAAGAATTGATTGAAAATAAGAGCACGCAACAAGGG CTTCCCCACAACACCATCCTCTCTCAACAAGAGAAACGAGCCCATCCCTGTTCCTCTACCACCGAACACGCACCTTCGCT AACTTGCGCCTTCTGCTTATCCTACGCACCCACCCCTTCTCCTCCTCGATAACCGTTCTGCCACCGCAATCTGCAAGATT CAGAGCGCACTGCCCCCCATTGGAAGAGGTTCTGGTGTCGGGGGCGCACAGGGTTAGGGTTTCTGAGAGATGTGGTATGC TTCAGGCGTTGATGAATCTCTTCTCTCCGTGTTGGAAGCCGTTCAAGAACGGTGATGACTCTTCTGCCGGAGCCGGAGGA GGAGGAGGAGGAGGAGGCATTGTCGGAGGAGGAGGAGGAAAAGGTGAAGGCAAGGACGGCTTGCTCTGGTTCCGTGACAT CGGAAAGTACGGCTCCGGTGAATTCTCCATGGCCGTTGTTCAGGCCAACCAGGTTCTTGAAGACCAGAGCCAGATCGAGT CTGGTCCCCTCGGCACCTTCGTCGGGGTTTACGACGGCCACGGCGGCCCCCTCGCCGCCCGATTCGTCTGCGATCACTTG TTCCGCGATTTCCAAGGTTCGCTCAATTCTCTCCCTCTCTCTCTCTCTTATGTAGGGTTTAGTGTTCATTTCTTGATCGT GAGTTTATTGGAAGTTTCGAACTGTTAAAGTTAGCAACCCGTGATTTTCATTGATTCGCTTTTTCGTGAACATGTAAAGA GTTGAATAAATGCGCGCCATAAATACTGTTGTTTGATGAGCTTGCTATTTAGGAACTCTGTCTCTTTCGAAATCTTCTTG AGTTTTTCTTGTTAGAAATTGAATGTGTGGTTTGTGTTGTGTGTGATAAAGTGTTGCTTTCTGTGTTTGAAGAGTCAACT ATTTGATTGAGATGTCTTGGACTTGGTGTTTGTGCAGCAATATCGGGTGAGTCACAGGGTGTTGTGACGGCTGAGACCAT TCGAGCAGCGTTCCTTCGAACAGAAGAGGGGTTCACGGCACATGTAACGGAATTATGGAATACTCAACCTCAAATTGCGA CTAATGGGACGTGTTGTCTGGTTGGAGTGATTTTTCAGCAGACCCTCTTCGTGGCAAATCTTGGAGATTCTCGTTGTGTG CTGGGAAAGAAAGTTGGTAACACTGGTGGGGTTGCTGCAATTCAGCTGTCTACGGAGCACAACGCGAATCTTGAGGATAT TAGACAGGAGCTTAAAGAATTGCACCCTGACGATCCCCAAATTGTCGTCCTCAAACATGGAGTGTGGAGAGTGAAAGGCA TTATTCAGGTAATTTTATAGGCTTTTGCCTCTAAAGGACTATCCTAACATGGCAACCTGTGTTTTACTTAAATGGGATGA TCGCTGATCAAATATTCATTAATTGCTTGGATTCTCTGTTATGTTTTCTTATTGAAGTGCTGTGCTGAAGAAACTTGTAT ATTGAGTTTTGATGATAAGATAGTGTTGGAAGCAACATTGTATTTTGTAAAGTCTGATACATGTGATCAACTTCACCAAC CCCTGTCTTCAAGTGTTTGTGGTTTATATGCTTAGTCTTGATTTGAATGGCAATGCAAAATGCTAAAATAAAGGAAAACT TATTGTGTGCCTAATATGCATGACGAAAAGAACTAAATCTGATAAGAATTGTAGTTTATATGAAGCACTCCATGAAGAAA ATTCCCTTTTGTTTCTAGTCCTACTCTGTTGACATTGAGGATGTGTGTTAGCAAATTAATCAGTGCTTAAAATTTATATG ATCACGTTGCTACGCAAAATTTTGATTAGCGCTTGTCAACTATGAGACATTTCAAGCAAGTTGCTTTAACTTGAAAGTGG GGGGCTTAACTTATCTGAATTGTCACCTTGCTTTAAAACAATACATTGCCTAACTCAACCTTTGCTTACATACATTCTAG TGAGACTCTATATGCCACTATGGTTTGTCAAGTTCATATGACTAGGCTTGTTTACAATGATATTTCTGCACACATGCAAG GTATAGCCTTATAGCCATAGGTCTCGTTTATTTTCATAGGATTTCTTAATGGTATTTTTGGATATGTAGAGAAAATGGAT AGATAGAAATGAAGAGTTAATGGGATGATGGATTAAGAGAAAAATAAAAGAAAGAAGGGTCAAAACTCTTCTTTTGTTTG GCTGGATGGAAAATGGAGAAGAAAGAAAATGTAGTTGTGTTAAAATAATTTTTGCAACCTTTTACATAATGATGGGTAGG TAAGATGGGTAAATTTGTCATTTCATGCATAAAATTCTCCCTCCCATTTTCTTCTTATGAGGGAGTAGACAATTTTTTCG TAAGCTCTACCATGGTTTTTTAAGTAATTCTAGGTAAGAGACATAAATTATTGCAAGAGAAGCAGCACGAGAGTAAGAAA AAGTTGTATGAGATTGAGGAATTAGAGTGGGTGCGGTTTAGAGAGATCGAAAGGAAGTTTAGGTAATAGTTCAGTTTGGG CACACATCAAAATTAGCATGGGAAAGAAATTTTTATCATACATCAAAAAATATTATATCATGAGACTGCTTGTAGCAATA GGTGTTTCATAGCAGCACACTACAAGAGAATGTGTTTTTCATTTGTTTGATTGAAACAAATATTACTTTGTGTCCTCAAA CTATATGAGGCCGTTAGTTATCAGTAGCAGTCATTTATTTAAAGTTTCAAAAGATTTAAACGATGTAAAAGAAAAATATT TTTATCAGAACAATTTGAACTTTTTATGGTGGATGTGATCAGGAAAAGAAACATGTGATGGTTGCTGAGATTAGAAATCA GCATTTTAAGTTAGTTGTCTACTAATGTATAATAGCCGGTTTTTATGTTTTTTAACTTTTTTTATAACTCCTTTTACTTA GCTGGCTGTTGTTTTGTTTAATTACTACAAAGTTTGTAGGTTAACTTAGTTCAATTAGTGCATCTGTGAAATGACACCAT TTGCATTATAGTCATGGTTATGCATGAAGAAAATTGGATATCAGCTTTTCCAGTTTGATCCTCAGCTGCCTTTTCAATTT GATTTATGATGTTAAATGTTTCAACTTTTCGATCTCCTGCAACCATTATCTTATTTGTCAGAATTGCTTTTCACACTGTA ATTATAACATCATCTCACCACTTCCATGATATTTGATGCAGGTTTCTAGATCTATAGGTGACTCGTATATGAAACATGCG CAGTTTAATCGGGAACCTATTAATCCAAAATTCAGACTTCCTGAACCAATGAACATGCCTATCATGTCTGCTAATCCAAC TATTCTTTCTCATCCTCTCCAACCAAGTGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAGTAATG AGCAAGCAGTTGATATTGTTCACAGCAATCCACGTGCGGTAAAATTCTTTTCTACTTTGTTTTTTTTTGTTTTCTCATAA GATTTACTTGTGTATTGGATTGGTTCATGGTTTATTCGTGTTCATTTTATATAACCAGAAAATGTTTTGGTTTATTTGTT TTGCACTGGATTAATTAATCCATTGATTGAATACAGCATAGTACTGTCCTCTTTTTTTGTATCATTTCAGTTAACGGAAT AGTGGCCGTAGTTACCAGTGTCTTAGGCTGACAGGTCATCCATGATAGCTCCCCATAGATTTGTGTTGCAAGACTCAAAT CACTTGAATCTTATTTGTACTTTCTTGATGAGATTCAGATTTTACTCAGTCACCATTGTGGGACTCAGATCACTTGAATC TTAGTTGTACTTTCTTGATGAGATTCAGATTTTACTCAGTCACCATTGTAGCCTCCTATATAATAATTTATTTGTCTAGG CAATTTCATCTTTGTTTCCACCTATGCATTTCTTTTTGAGACACTTAATGATGAGGGAAACTTGTTATTCCCAATTTATG CATTGCTAGTTCTTGAAGGGTGCAATGCAGAGTAATTGAGCAGCATTTATAGGTTAAAGTTGTAATACAATTTTATGATA TGGCTGTGCATTGTTGGTTTTCCAGAAAAACAGAGAAAATTGAAGCGGTGATATTGATTCAGCTGGTTATTGTTTTTGTC AATGCCTTGCCTTTTGCTTGTTGATTCCAAAATTCCAGTGGTGCTCATGAACTGTGTTGGTTGATGCAGGGTAGTGCAAA GAGACTTGTGAAGGCTGCGCTGCAGGAAGCAGCAAGGAAACGTGAAATGAGATATTCGGACCTTCGAAAGATAGACAAGA AGGTCCGGCGGCATTTTCATGACGATATAACTGTTATTGTTTTATTCTTAAATCACGACCTTATATCTAGAGGTTCAGTT CTAAACCCGCCACTCTCACTTCGAAGTGCTCTTGATCACTGACTTCTTGTATCATTGTTGCAAACTTATACGGGTGGGTG TTCTGGGCAACAACTGTGTGCGTACCAATACCAGAAGAGATAACCACTGGCATGTTGCGAGAATATACCATGTTCATAGT GCTGATAGTGGCACTGAGACAACTTATTGTTGACGCTTGGACTTATAACACGTTAGAAATTTATCCATGGAAATGACAAG AAAAAAGGAATCGGAAATAACTTTTGATTTTGCAACTCCCTTATCTTCATTGTACATTATGTTAGTCGTTCGAAATGCTT GACCTGATCTTTGCCTTCAAACTCCATGGACGAGCAAAGTTGTGAGTTTGATTGGATGAGTTCAAGTTGATCACAAGTTG TTGGAGAGTTTTCATACATAGTAATGGAGGAATTGAAAAAATTGATGATTAAAGGTTATGACTAATTAATATGTGTACTA AATTATAAGATTATTTACATGTTAACCATAAGATTATTTGTATAGAGTCAATTTTTCATATTAGAAGGGCTAAATGATGA AGCATCATATATGTATGAGATATATGGTTAAATTGTCTTCTCTTTCTACTGAGATAAAATTCATTGACTATTATTGTATT GTAGCGGTCGATTGAGTGTGTTTAGATTGTGAAGTAGACTCATTTTCCCTTCTAAAGTGTTCGAATGAATGCTTTGAAAA TTATTTTAAACAAATAATTATACCTTCTCCATCACTAATACATGAGAGTATGAGACTATCTTGTCTATATATAGGATAGG AAATGATATGTCATTGTTTTGCATGTGAAACATTAATGAAATTCATGTGGATTGTTTAGGCTTTATCCCTCTTCCAGCAA CATGCATCGCTTGGTTTGTCCTTT
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0259600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTTCAGGCGTTGATGAATCTCTTCTCTCCGTGTTGGAAGCCGTTCAAGAACGGTGATGACTCTTCTGCCGGAGCCGG AGGAGGAGGAGGAGGAGGAGGCATTGTCGGAGGAGGAGGAGGAAAAGGTGAAGGCAAGGACGGCTTGCTCTGGTTCCGTG ACATCGGAAAGTACGGCTCCGGTGAATTCTCCATGGCCGTTGTTCAGGCCAACCAGGTTCTTGAAGACCAGAGCCAGATC GAGTCTGGTCCCCTCGGCACCTTCGTCGGGGTTTACGACGGCCACGGCGGCCCCCTCGCCGCCCGATTCGTCTGCGATCA CTTGTTCCGCGATTTCCAAGCAATATCGGGTGAGTCACAGGGTGTTGTGACGGCTGAGACCATTCGAGCAGCGTTCCTTC GAACAGAAGAGGGGTTCACGGCACATGTAACGGAATTATGGAATACTCAACCTCAAATTGCGACTAATGGGACGTGTTGT CTGGTTGGAGTGATTTTTCAGCAGACCCTCTTCGTGGCAAATCTTGGAGATTCTCGTTGTGTGCTGGGAAAGAAAGTTGG TAACACTGGTGGGGTTGCTGCAATTCAGCTGTCTACGGAGCACAACGCGAATCTTGAGGATATTAGACAGGAGCTTAAAG AATTGCACCCTGACGATCCCCAAATTGTCGTCCTCAAACATGGAGTGTGGAGAGTGAAAGGCATTATTCAGGTTTCTAGA TCTATAGGTGACTCGTATATGAAACATGCGCAGTTTAATCGGGAACCTATTAATCCAAAATTCAGACTTCCTGAACCAAT GAACATGCCTATCATGTCTGCTAATCCAACTATTCTTTCTCATCCTCTCCAACCAAGTGATTCCTTCCTTATATTTGCAT CAGATGGTTTATGGGAGCACCTGAGTAATGAGCAAGCAGTTGATATTGTTCACAGCAATCCACGTGCGGGTAGTGCAAAG AGACTTGTGAAGGCTGCGCTGCAGGAAGCAGCAAGGAAACGTGAAATGAGATATTCGGACCTTCGAAAGATAGACAAGAA GGTCCGGCGGCATTTTCATGACGATATAACTGTTATTGTTTTATTCTTAAATCACGACCTTATATCTAGAGGTTCAGTTC TAAACCCGCCACTCTCACTTCGAAGTGCTCTTGATCACTGA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0259600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLQALMNLFSPCWKPFKNGDDSSAGAGGGGGGGGIVGGGGGKGEGKDGLLWFRDIGKYGSGEFSMAVVQANQVLEDQSQI ESGPLGTFVGVYDGHGGPLAARFVCDHLFRDFQAISGESQGVVTAETIRAAFLRTEEGFTAHVTELWNTQPQIATNGTCC LVGVIFQQTLFVANLGDSRCVLGKKVGNTGGVAAIQLSTEHNANLEDIRQELKELHPDDPQIVVLKHGVWRVKGIIQVSR SIGDSYMKHAQFNREPINPKFRLPEPMNMPIMSANPTILSHPLQPSDSFLIFASDGLWEHLSNEQAVDIVHSNPRAGSAK RLVKAALQEAARKREMRYSDLRKIDKKVRRHFHDDITVIVLFLNHDLISRGSVLNPPLSLRSALDH
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13832:SF325
42 381 340 2.2E-154 –
PANTHER
PTHR13832
42 381 340 2.2E-154
IPR015655
SMART
SM00332
49 361 313 3.7E-69
IPR001932
Gene3D
G3DSA:3.60.40.10
56 370 315 2.6E-80
IPR036457
ProSiteProfiles
PS51746
59 363 305 42.716
IPR001932
CDD
cd00143
63 363 301 3.28112E-61
IPR001932
SUPERFAMILY
SSF81606
71 364 294 8.37E-53
IPR036457
Pfam
PF00481
86 333 248 2.3E-37
IPR001932
ProSitePatterns
PS01032
88 96 9 -
IPR000222

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of
GO:0043169
Molecular function Cation binding Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0259600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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