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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0271900 |
| Transcript ID | LotjaGi6g1v0271900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-glucosidase; TAIR: AT5G04885.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A0S3S4G2|A0A0S3S4G2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0271900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:58661016..58667175) extracted from Lotus japonicus Gifu genome v1.2.
CGTTACCAAAATAAAATAACTTTCCTATAATTACTCTACACGAGAAAAATATCGCCCACTTCAAACGCAAACGGTGGTAA GTGTCTCCCACTACTCTCCATTGCCAACGCCACTTTCTGCTTCTTCTGCTTCCTCCCATCTCTGCACGATTTCCACCACC CCATCTTCCAAAGTTCACTTTTTTCAAATCAGCATCTCATAAAGTCACCATTTTTGCTTTCTTCATAAGCCCCCTTTTTT CTCTCTCTTTCTCAACACACACATCTTCTGCTACACCTACTTCACTTGAAAACTCTACCATTATTGCTTGTTTTGATTGG TTCACTGTAAAAATATTGTGCTTGATCTTTGCTGGTAATAGTAGTAATACTTATATACTTTTATACCCCTTTTCACATTT TCAATTTTTTAAGCTGCTGATGATGATTCAAGTAATGGGGTTTGGGTTTTCTTCAACCCCTTTTCATTGGATATGCTTTT CTTTTGCCTGCTTTTTAGTTTACCTTATAGGCCAAGTGGGGTATAAATATGAATCCAAAAACTGAAACTTTATTGGGTAT GTTATCTATTCTGCAGGTGAAAATAGAGCTGGGGAATTCATGATGTCTAGGGCATTGGTTCATTTTTGGGGTGTTTTATG GCTATGTTGGTGGTTGGCATCAACTGGAGAAGCTCAAGTGGAGTACTTGAAATACAAAGATCCTAAGCAGCCGGTCGCGA CTCGGGTTAAGGACTTGCTGGCTCGAATGACTCTGGAGGAGAAGATTGGTCAAATGGTTCAGATTGATAGGAGTGTTGCT AGTGAGGCTGTTATGAAAAACAATTTCATTGGTATGAACTGGAGACCTCATGTATAAGCCTCTTTTTTGGTTTTATACAA TTTAGGAAAATCTTTGTAGGCTAATTATATGTTTGGATTGATTGTGTTACGCAATTTTAAGCACGGCACACTTTTACGGG GCTTTGCTATCATAGGAACCGAACACGCTATAAATAAGAATGTGGCATGAATTAGTAAGGAAATGATGGCATTGTTAGGA TACACTATCAAATATTAATTAGCTGGTTCTTTTATTTGTTTGCAGGGAGTGTATTGAGTGGTGGTGGTAGTGAACCTCTT CCAAAGGCTACTGCTGAAGACTGGGTTAATATGATCAATGGATTCCAGAAAGGGTCTCTGGAAAGTAGGCTGGGCATCCC AATGATGTATGGTATCGATGCTGTTCATGGACACAATAATGTCTATAATGCTACCATATTTCCCCATAATGTTGGGCTTG GATGCACCAGGCAAGATTTTATTTATTTTTCCATCTGTTTGCTAGAATTTCAGCATTTAGTACGATGATTTTCATCTGCA GTTTGATCTTAACAATTTATCTAGCTCAAGGGTCTTGTCTCCTGGACCATTTAAAAAATCTTGCTTTATTGAACAAAACT TCACCATGGGTTGTGCAGCTGTTGCTAGCTATGAAGTATGAGTGAATGATATTATTAAAGCAATTTCTCATGATCTTAAT GTTGATGACTTGATGATGTTGTATTGTTACTTAGGTTGCATGTATGTTGGATGCATCCACCATTTATTCTGTTCTAACGA TCTTTGATGAACAGGGATCCTGACCTGTTACAACGGATCGGTGCCGCAACTGCTCTTGAAGCCAGAGCGACAGGGATTCC ATATGTTTTTGCTCCATGCATTGCGGTAAATAATATGAGATTCTAATGATAAACTTGTAAAAAACTTCTTGTTTGTGGTT TGAAGTTGTCAAATGTGCAGTTTTTTCTTTCTTCTTTGGAATTTTACTGATTACTCCTGAACATAATTATAGGTTTGCAG AGATCCAAGATGGGGTCGCTGTTATGAAAGCTACAGCGAGGATCCAAAAATTGTGGAAGAAATGACAGCGATCATACCTG GTCTACAAGGAGATATCCCTGCCAATTCCAGGAGGGGATTTCCATATGTTGGTGGCAAGTATGAAATTTGTGATAGTAAA GTCTTTTTATATAGAAGAGTCGGTTTCATTTGGTGTTTTACGTCCACATTTTATAAAATTTACTTCAGGGGCCATGATGT CTGGGTTTTGATACCTAATAGTCTGGTTTTCCTCCTATGGAAATATTATGTAGTCGAGCACATATAGTTCACGGATCTTT AGTATTTTACATCACTAATGTTAATCAAGGAAATAATAAACTTAAACTTTAAAGCAGTGTTGTCAAACATCCTCCATGGT GCCGCATGGCCAAATCTTATGGCGGAATTCTAGCTAGCCGCCATGGCCGATATTCCGCCATAATCCATCAAAATTTGTCA AATATGGCCTGTTTTTGGCTTTCCGCCATCAACCATTAACAACATTGCTTTTAAGTAGTATATTTCGGAAAGATTATTAT ACATTTTAAAGGAAGTGTTGCTAATGGTAACTCTATTACAGTATCACTCTGTATCTGCAAGTTGTTGATATGATTGATTT ACACTTTGTTCTGCCTTCCTGGCAACGACATGATGTGTAATCTGGATTTAATGGATACTGATTTATGGTATAAATCTTAT TTCTGCAAATAAGGTCCTTTTAAGATGTTTCTCTGAATCTTAAGTTGACTGACTTAGGGGAATACACTTCACATTAACAG CAATCATCAAGTTATCCTAGTTTATTAAGTTGTGAAAAAAAATGAATTTTAAAAAATCACAATTATATGATTGACTTGTA TTATGTAGCTACTTATATGTTAGAGGTTCGTTTTGTCCCTCTATCCTTCATTAATCTTAAAAAAAAATTGTGTAGGACGA AGGTAGCAGCTTGTGCTAAGCACTTTGTTGGAGATGGTGGTACAACCAAGGGAACAAATGAGAACAACACAGTGATTGAC TGGCATGGATTGCTGAGCATTCACATGCCTGCCTATTCTGATTCGATCATTAAGGGGGTCTCTACAGTCATGGTTTCATA CTCCAGTTGGAATGGTGTAAAGATGCATGCAAATCATGATCTAGTCACCGGCTTCCTCAAGAACACCCTTAAGTTTAAGG TGATTGGCCATGTTGGCAAATCGTGATCTCTACACTGGCTTCCTCAAGAACACCCTTAATTAATCTTTATTGTTCTTCTT TTCTCTTACAGAGCTAGTTCTATGCACACTTGCCATCTTTCTAATTGAAAGTTTATCCTATTTATTTTCATAACTCCTCA CTTTATTTTTTTTTTATATTTCTCATAGCTAGATATTTTCTACTTAATTATCTTTAAGCCATTACCAGCTCCCAATTTTA AGCAGCATGATTTTGTATTGATGGAAAGAACGATTTTTGTTCGCTCATGTGTCAGGGATTTGTCATCTCAGATTGGCAGG GTATTGACAGACTCACAACACCACTTGGTTCAAACTACACATACTCTGTCCAGGCTTCCATTGAAGCTGGTATCGATATG GTTAGTATCATGCTGAAATTGCTGCAGCGATGGAATGAATGTAATGCTTACTGAAGTATAGGATTATAGAACTCAGTCGT TCTTTTTGTTGACAAATTATTACAGGTGATGGTCCCCTACAAATATGATGACTTCATTCAGGACCTTAACCTCTTGGTCA AGAACAACATAATTCCAATGGAGCGTATTGATGATGCTGTGGAGAGAATTTTGCTTGTAAAGTTCACCATGGGCCTTTTC GAGAATCCTCTAGCCGATCTCAGTTTAGTCAATGAGCTTGGAAGCCAGGTGTTTCAATCAAACCATCCCAATCATAAAAT GGATATTTCCCATAATGAAATTGATGGGCTATTTATTTCAACCAGAATAATGAAAAATAATGTTCTCTTTTATTTGATGG GAAACAGTATATTTGATGAAAAATTCTTTATGACTTCTTTGAACATAATACTCTTGTAAATTTTGGTCGATATGCATGGG CTGTATCAATATTGTGCAATTGCATTGCATGGAACTAAACAGAATATATTGGCATTCTTTGTTGATATAACTTTTTGCGT TGATCTTTTCTGATGCATGCAAGTGGGTTAAGGGAGAAAACAGTATGCAACTTTGAGGATTTTCTTGTTGCTTGTAATTT AGAGTTTATCCTAGCATAATTGAAACATTGAGATATAAGATTATGTTTTTAACTAGGAACACAGGGACCTAGCTAGAGAA GCTGTGAGAAAAACCCTCGTGCTGCTAAAGAATGGGAAAAATGAAAGTTCTTCTCCACTTCTTCCTCTTCCTAAGAAGAC CCCAAAAATCTTAGTTGCCGGTACTCATGCTGATAATTTGGGTTACCAATGTGGTGGCTGGACAATCAAATGGCAAGGGT TCACTGGCAACAGTGACACAAGTGGTAAGTGACTCTCAAAAGTCAAAAGGGGAAATTAGTAAAGTTATTATAGAAATGAA TTGACAGACTTTCTTTTCCATGTTCAGGAACAACTATTCTCAGTGCCATAAAAACCGCAGTAGATCCAAGCACAGAAGTT ATCTTTCGCGAGAACCCTGATAGTGAATTTGTTAAGTCCAACAATTTTGAATATGCCATTGTAGTAGTTGGTGAGCCACC TTATGCCGAGACTGCCGGAGACAGCACGACTCTTACAATGTTGGATTCTGGCCCGAATACCATCAACAATGTCTGCGGGG CTGTTAAGTGTGTGGTTGTCGTCATTTCTGGCAGACCTATTGTGATTGAACCATATGTTTCAACTATAGATGCATTGGTG GCAGCATGGTTACCAGGCACCGAGGGACAAGGCGTGACTGATGTCCTTTTCGGTGACTATGGTTTCACTGGAAAGCTTGC AAGGACATGGTTCAAATCTGTAGATCAACTCCCAATGCATGTTGGTGATCCTCACTATGATCCACTTTTTCCTTTTGATT TTGGGCTGACAACTTTATCTGTCAAAGACCTAGTTGCAAGGTAATATTTATTTCAAGTTTGAAAGCTTTTATTTAATTGA TCTAATACCCCATGTCTATTGTGCTTTGCTTCAGCGCTTCAAACTTCAACTTTTTTAGAGCATTGTGTACATGTCCTATG TTGTTAATGAGTACACACTGCACTTTTTTGTGTGTTTGGATACTAGCCGAGTACAACGTGAACAGACTTTCATCTCAATT ATACGAAAAGTCATGTTCACTTTTGTCTTGAAGTGCTTGTTAATGTATGTTTGCACTTGTCTAAACAGGTAATCTTAGTC ATTGGCTGATGCCTGTAACTTCATTCTAGCCTTCCACTTGTTTTATTACCATAACCTTTAGTATAGATTTACCTGCCCTT TTTTTGTTATCGTTCACTGCAATCATTTCATTGAAGGGTTGTTTTGTCACTTTGGTGCATGAAGAATGTTGTTGCCAATG GTCAATGACACTAGTAATAAAACATTTCCCAAACAAAAAGCAATTAAACTCAATGAAACATGACAATGGAATTTATTCCA TGAAGAGCATTATTTTACCACCTTCATTTGCTATATAACTTTGTTGTTCAATGCCATTGGTCAGTAACATCTTTTATATC TGACAAGAGTTGCTTCTGATATACTGATGGAGCCATTGATTGTGCAGGTCAACCTCAGCTGCTGACAGTGTAAGGGCTTG TATAATTACCATTATGGCTACACTACTCATCTGCTTATATTCAACTGGTATGTTTTGTGATTATTTTTTCTAGTGACAGA AACTGAATACTCTTATGTTCAATACGATTTGTAATTTGATTGTTTGTTCATTTCGATAGGTTAAGCACAATTTATGGGAG CTTATTATTGAAGCTGGCGGCTAGAGAACTAACTTGTGATACTTCCCAGCTTAGTCTTATTCATTGTATTAGCATTAGGA CATTATGATTGTTCATGAACTAGGACATTTTTTTGGTACATACCCTCTATTTATTCCATCGTCTTTTACTTATTTCTTTC GAGTTTTGGGCTTCTTGCATTAGCTGCAACCTGCAAACAAATGCTATGTTTAGATCTTCGTTGGCACTGGTGCAACAAAT GTTACATAGTCCAAGAGAAAAAAAATGAATGGATGGATCGGGTTGAATGTTTTTCATGTTACTTCTAACTGGTTGCCAGT CAAAAAACCGGGCAATTTATGTTACTATCCTCTACTAATGAGCAATATATATATAAAAGTGAATATATATTCTTATGCTC
CDS sequence (LotjaGi6g1v0271900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTCTAGGGCATTGGTTCATTTTTGGGGTGTTTTATGGCTATGTTGGTGGTTGGCATCAACTGGAGAAGCTCAAGT GGAGTACTTGAAATACAAAGATCCTAAGCAGCCGGTCGCGACTCGGGTTAAGGACTTGCTGGCTCGAATGACTCTGGAGG AGAAGATTGGTCAAATGGTTCAGATTGATAGGAGTGTTGCTAGTGAGGCTGTTATGAAAAACAATTTCATTGGGAGTGTA TTGAGTGGTGGTGGTAGTGAACCTCTTCCAAAGGCTACTGCTGAAGACTGGGTTAATATGATCAATGGATTCCAGAAAGG GTCTCTGGAAAGTAGGCTGGGCATCCCAATGATGTATGGTATCGATGCTGTTCATGGACACAATAATGTCTATAATGCTA CCATATTTCCCCATAATGTTGGGCTTGGATGCACCAGGGATCCTGACCTGTTACAACGGATCGGTGCCGCAACTGCTCTT GAAGCCAGAGCGACAGGGATTCCATATGTTTTTGCTCCATGCATTGCGGTTTGCAGAGATCCAAGATGGGGTCGCTGTTA TGAAAGCTACAGCGAGGATCCAAAAATTGTGGAAGAAATGACAGCGATCATACCTGGTCTACAAGGAGATATCCCTGCCA ATTCCAGGAGGGGATTTCCATATGTTGGTGGCAAGACGAAGGTAGCAGCTTGTGCTAAGCACTTTGTTGGAGATGGTGGT ACAACCAAGGGAACAAATGAGAACAACACAGTGATTGACTGGCATGGATTGCTGAGCATTCACATGCCTGCCTATTCTGA TTCGATCATTAAGGGGGTCTCTACAGTCATGGTTTCATACTCCAGTTGGAATGGTGTAAAGATGCATGCAAATCATGATC TAGTCACCGGCTTCCTCAAGAACACCCTTAAGTTTAAGGGATTTGTCATCTCAGATTGGCAGGGTATTGACAGACTCACA ACACCACTTGGTTCAAACTACACATACTCTGTCCAGGCTTCCATTGAAGCTGGTATCGATATGGTGATGGTCCCCTACAA ATATGATGACTTCATTCAGGACCTTAACCTCTTGGTCAAGAACAACATAATTCCAATGGAGCGTATTGATGATGCTGTGG AGAGAATTTTGCTTGTAAAGTTCACCATGGGCCTTTTCGAGAATCCTCTAGCCGATCTCAGTTTAGTCAATGAGCTTGGA AGCCAGGAACACAGGGACCTAGCTAGAGAAGCTGTGAGAAAAACCCTCGTGCTGCTAAAGAATGGGAAAAATGAAAGTTC TTCTCCACTTCTTCCTCTTCCTAAGAAGACCCCAAAAATCTTAGTTGCCGGTACTCATGCTGATAATTTGGGTTACCAAT GTGGTGGCTGGACAATCAAATGGCAAGGGTTCACTGGCAACAGTGACACAAGTGGAACAACTATTCTCAGTGCCATAAAA ACCGCAGTAGATCCAAGCACAGAAGTTATCTTTCGCGAGAACCCTGATAGTGAATTTGTTAAGTCCAACAATTTTGAATA TGCCATTGTAGTAGTTGGTGAGCCACCTTATGCCGAGACTGCCGGAGACAGCACGACTCTTACAATGTTGGATTCTGGCC CGAATACCATCAACAATGTCTGCGGGGCTGTTAAGTGTGTGGTTGTCGTCATTTCTGGCAGACCTATTGTGATTGAACCA TATGTTTCAACTATAGATGCATTGGTGGCAGCATGGTTACCAGGCACCGAGGGACAAGGCGTGACTGATGTCCTTTTCGG TGACTATGGTTTCACTGGAAAGCTTGCAAGGACATGGTTCAAATCTGTAGATCAACTCCCAATGCATGTTGGTGATCCTC ACTATGATCCACTTTTTCCTTTTGATTTTGGGCTGACAACTTTATCTGTCAAAGACCTAGTTGCAAGGTCAACCTCAGCT GCTGACAGTGTAAGGGCTTGTATAATTACCATTATGGCTACACTACTCATCTGCTTATATTCAACTGGTTAA
Protein sequence (LotjaGi6g1v0271900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMSRALVHFWGVLWLCWWLASTGEAQVEYLKYKDPKQPVATRVKDLLARMTLEEKIGQMVQIDRSVASEAVMKNNFIGSV LSGGGSEPLPKATAEDWVNMINGFQKGSLESRLGIPMMYGIDAVHGHNNVYNATIFPHNVGLGCTRDPDLLQRIGAATAL EARATGIPYVFAPCIAVCRDPRWGRCYESYSEDPKIVEEMTAIIPGLQGDIPANSRRGFPYVGGKTKVAACAKHFVGDGG TTKGTNENNTVIDWHGLLSIHMPAYSDSIIKGVSTVMVSYSSWNGVKMHANHDLVTGFLKNTLKFKGFVISDWQGIDRLT TPLGSNYTYSVQASIEAGIDMVMVPYKYDDFIQDLNLLVKNNIIPMERIDDAVERILLVKFTMGLFENPLADLSLVNELG SQEHRDLAREAVRKTLVLLKNGKNESSSPLLPLPKKTPKILVAGTHADNLGYQCGGWTIKWQGFTGNSDTSGTTILSAIK TAVDPSTEVIFRENPDSEFVKSNNFEYAIVVVGEPPYAETAGDSTTLTMLDSGPNTINNVCGAVKCVVVVISGRPIVIEP YVSTIDALVAAWLPGTEGQGVTDVLFGDYGFTGKLARTWFKSVDQLPMHVGDPHYDPLFPFDFGLTTLSVKDLVARSTSA ADSVRACIITIMATLLICLYSTG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| PANTHER | 3 | 655 | 653 | 0.0 | – | |
| PANTHER | 3 | 655 | 653 | 0.0 | – | |
| Phobius | 5 | 20 | 16 | - | – | |
| Phobius | 21 | 25 | 5 | - | – | |
| Gene3D | 25 | 400 | 376 | 2.8E-153 | ||
| Phobius | 26 | 642 | 617 | - | – | |
| SUPERFAMILY | 30 | 414 | 385 | 6.21E-122 | ||
| Pfam | 51 | 377 | 327 | 9.2E-70 | ||
| PRINTS | 112 | 128 | 17 | 1.1E-25 | ||
| PRINTS | 136 | 155 | 20 | 1.1E-25 | ||
| PRINTS | 182 | 198 | 17 | 1.1E-25 | ||
| PRINTS | 228 | 244 | 17 | 1.1E-25 | ||
| PRINTS | 298 | 316 | 19 | 1.1E-25 | ||
| Gene3D | 401 | 629 | 229 | 4.4E-86 | ||
| SUPERFAMILY | 416 | 626 | 211 | 5.89E-57 | ||
| Pfam | 416 | 626 | 211 | 2.1E-34 | ||
| Phobius | 643 | 662 | 20 | - | – | |
| Phobius | 663 | 663 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi6g1v0271900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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