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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0289300 |
| Transcript ID | LotjaGi6g1v0289300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein family; TAIR: AT3G18670.2 Ankyrin repeat family protein; Swiss-Prot: sp|A2CIR5|NPR4_ORYSJ Ankyrin repeat-containing protein NPR4; TrEMBL-Plants: tr|A0A151T6S0|A0A151T6S0_CAJCA Ankyrin repeat-containing protein family; Found in the gene: LotjaGi6g1v0289300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:60650647..60657080) extracted from Lotus japonicus Gifu genome v1.2.
GAAAGAATGAAGAATCCATGTATATATATGTACTAGCTAGGTCTCACTAAAATTCATCAAAATCCACACATAGCATTAAC CTGAGTGTTGGATCCAACTTATCACATCACAATATCACATCATATATTTACAAATATGAAGGCTGAGATAGAGACATCAT CAGATAGTAGGTTCTACACATTTGATAGAAAAATGGAAATTCCTCAATGGGCTGCTATGAACGAAGATTGGAAAGCCTTC AAGGAATTCTTCCAGCAAGACAAGAAAGCTTTGCTTGAGCCCATGGACCTGAACCAAAGCACTGCCCTTCATGTTGCTAC CCGCTCCAACAAACCGCAACAACTACTGGCAGAGTTGCTAGACATGCTGCCTGTCACTGACCGGCGGCTCGCGCTGAGGC AGGGGACTGCTTACAAAAGCACTATTCTCCATGAAGCCGTCTCTTACTGCAGGAAGAATGTTGAAATTGTGGACATGTTG CTCAGGTACGATGTGGTGGTGCCGGCTGCAGATGGAGAAACTGGTGAACAAGAAGAAGAAAAGCAGGTTCCCCTGCTGGA GATGAAAAACTACTTAGGTGAGACTCCAGTTTACAGAGCAGCTAAGGTGGGGAACCTGAGGATGCTCCAGCACTTGGCCA AACTTGTGCCGGACTTGCAATTGCATTTCATCAGAGATTCAGACAAGGCTCCAATTCTTCACATTGCTATAATCACCCAA CACTTAGGTAACTCTCTTCTCTGTCACGCCCCTGTTCCATTTTTTGATAACTAAATCAAACTACTTATAATTTGCAATGG TATAGAGTCCAAAAGATACACAAATGGTTTTGGCGCCACATTTATCTAACATACTACTTAAATGATGGTTTTTAATCGTC GCTAATGTTGGTCAGGGACGGAGGGAGTGGGGTGACTGGCTCATGCTCCAGTCACCCCCAAGTTGGAAATTTTTCTAACC AATACTTAGTGAAAAAATATTTTTTTGCACCCCTCACTTTTAATTTATCCAATAGGTGAAGTAGAGAATACATTTCCATG GCATAAATTCCTGATGGCTGATGCATGATTGATAAGTTCTAAATTTATAGTCCAATCACTTTTGCTAGTCACACTTATAA ATTGCAGTTAATGTGGTGATCGATTAATTGATGTGTTTCAGTGTTAAGGTATTGCTTGTGCCTTCTCCACTCTGATGTAC TCAAAAGAAATTGAAGTAATGTGGTGCTAAATATACTAAAACTGAACTATGATTTTCTACATGATAATGAGAAAAAAATA TTCTTTGAAATAGCTTATTTCTCTGCGATTTTATGTTATGAACTTACTGTGGGCTACTTTTTCTACTACCTTTTGAGAGG GTATACCCAACTAAAGACCATATACAATGGTTAAACAAAAAATGTTTTGTTTAACCATTTTCTACCCCACTTTTTCTCTT CCTAACACTCCACATCATCTTCTCTCTCTAATTCAACAAACTCTCAACAATTACTCACTCCAATGGTTTTACTTAACTCT CAACACCCTACCCCACCACTCACCCTACCCCACCACTTTTTTATTTCACATTTTTATTTAATTTTATATTTTTGTTTTTA TAATTACATAAAATTACAATTATCGATTTAAATTAAATTAAAACAATAAACACTTAACAATTTTTTTTTTAAATATAGAC TATAATTCTGGGTGTTGAAATGGTGATTGTTGGGATCCATTTCAATACAAATACTAATATATATAGATAAATAAGATGGT GAGAGAGATAAAGAGAGTGAAAAAACTTGGTTTTTTTTCTGTGTCCAAATCAAACGAACCAAGTCTCTATTTATAGAGAA AAAAAATCATGAATTTTGGTATAATTTTTTTTTTCAGAAAATATTTTTTTTGATGAAATAATCGAGTTTAAAAGATAAGG AAAAACGAAATCTGGAGCAACCAATCAGAACGAGCCACGTGTTAGGAGCCAAAAAAAATAATTTCTCTTTCCTGGTCTGC GCGTGTGGCACACGCGCCTGCGGTGGCCACTGACCTCGCGCCACGTGGCACACCGCAGGCTCTTTAAAGTTGTTGAAAAT CTTCAACAAATTTTTTCTCTCTCCCCCCTTTCAACAAACTTCAACAACCATTAAACCATTTCAACAAAATTCAACAAACT TAAACAATGGTTTCAACCATCCATTGTATATGGTCTAATGTCTTTTTGTCAAGTCTCATTTTTTGTTCTTGTTAAAATCC TTATGAGCTGGTTAGTATGTATTGTACTCAAACTAATTATATATTTCTCATGCTTATAAAAAATTGCTAGTTATATATGA TTTTTTGCACATGCTTTGTGAGAAAAATTAAAATTTTCTCATAAATTACATTCCTTCCTGAGTTTAATTTTGATGCACCG ACGGTGTAAAGTTTTTTTACACATTCAACCAATCAAATTTCAAGGATGTGAGAAAATCTCTCTTTTTATTTAATTTCATT AATTGATGTGGCATATCCTTGAAATCTGATTGGTTGACGGTGTAAAAAAACTTTACACCGTCGGTGCATCAAACTTTTTC TCTTCCTTTAAATCTTCGTCACCCCCTTATAAAATTCATGCCTCCGCCCCTGGTTGGTAACTGTTAAAATAGCCGCTAAA TCGTATGTCGGATTTACGTCATGTTAGAATTGAGTATCTACCTATCGAGACTCGAGACTCAGTTGTATATATGCCTCTTT TTTGGGTATATATGCCTCTAATATGCCAATTTGATTTTTTTAAAATTAATAAATAAGAGGAAAATCATGTTTTCCTACCT TTGTATTATACACTAATCCCACAGGAAGATTCCATTCACACATTCAAGCATTTTTAGTGTTGTTACACTAAAATTGGATG ACTCAATTCTGAGTTACTGTTTCAAATTTCTTATTACAACTTAATATATGTGAATCGTTCGATATATTTCACTATGGAAT TTCTCTAAATGCGGGAAATGCAAATGATTTGCAATACTTGTGTTATGCACTTTCAAATTGATAATTATTGAACAAAACTG TATACTTTAAAACTGGGTATGTTTTCATGTTTGGAAAAAAAAAGTGATTCTAAGAAGAAACTTCTTTTGTGGATGAAGAA GTGATTCTGATACGGATTAAAGTGAATTAAAAAATGTTATAATTAATTTTTACTTTGTGGAGCAGATGTAGCTGTTTGGT TAATGAAAGTGCATGGGAAACTAGCTTATGAAAAGGACTCAAATGGATTAACTGGTCTTCAACTGCTATCCAATATGCCC TCTGTTTTCCTGAGCCATGCCAAGCTTGGAATCGCAAAGACTCTCATATACTCTAGTATTTTTCTTCCTCCACATATATA CAATTCATATTAATTTTGATTAATTATAATTGATTGTCATTATATTTATACTTACAGCTCTAAACTATCCTCCTCTAAAT TTCTTATGATCAAGTGAGATTTCATATTATAAGCTTATAATATCCAATCATATGCATGGTCAAAATTTGTTTAGTCCATT GATTCTAATGTAATCATTCACAGTGCTTCCCGAACGCGATTATGAGTATGAAAATTATGATGAAAGCATTAAGGTCATCA GAGGAGGGATAGATTTAGAACATGGGAAAGAACATGCAAAGCAGCCACCAATCTCAGGTACTGTAGGACAAACTACAACA CAGTTTTTCACTTTTTTGTTTATGCTATACCACATATTTAAACACTACTAAGTACTAACACTGAATACAAATATCACAAA ATTGCAGTGATTTCAAGGACCAACTACGCATTTTGGAAATTTCTCTCACAAGGTACAACCTATTACTATTTGTTTTATTA TATTTGGATTGTGTGTTTGGTTAAGAGTTCTTATACAATTCAACGTACTGCACAACATTGTGAGAAACCCAAAAACACCC ATTTTGTGGCGCTTTAAAACACCTGCAAAGAAGACAATTTAACAAAAAAACATTTTTCCACTTTTGTGGCATTTGGACAA AGTTGCAGTCTACCAATCCTTTCCCAGATACAACTATAACATGAATAACTTAATTTTGTCAATTCACCAACAGTGCATAC ACCAAAAAGTACCTATTTTGTCGAAGTTGACAACAGCCATAAAGGTGGTTAATTTAAAAATAAAATAAAAAAACATATTT CCACCTTTGCGGCATTTAGAAACGTCAACAAAAGTGGGCGTTTTTTTTTTTGTGTCAGCACTTTGTGCGAGCATTCAAAG GCCACAATCTTATAAGTTTCTCTTTGAAATTGATTTTAACTTTCAAATAAATGGTAAGTGAATATTCAAACATGCTATTA CTAATAAGTTTCATTCATCACGTACATAGCAGAATGGGATGTGGTTGATCAATTTTGGAAGAAAAAGAAGCAGAACATGT TAGCAGAGCGTCTAACAGACTTGTTAGTACAGAAAGATGAATCATGGCACAGCACCTATATTGACAGTGGGAAAACAGTG GTGGTATTGCCAGTTATTAATCCGTCAAACGTGGCTGCAAGTAAACTAACTTACCAAGGGAAGGAACAACCTGGACAACA AAGCCAGAAAACTTACAGTGCGTACACTCCATTGCTCTTGGCGGCGCGCAAGGGGATTGTGGAAATTGTGGATAAAATAA TTGAGATGTATCCAGAAGCTGTACATCATGTGAGCGAGGACGAGCTGAACGTGCTTCATGTGGTTGTGGCAAACCGTCAG ATGAATGTTTACCAGATATTTAAGAGGCAAGGTTTGTTGAGGTCGTTGGGTCAACTGATAAGCAAGAAAGGTCGCACTTT GTTGCACCAGGTGGGAAGGATAGAGTATTACAGAGGAGGTCAACAAGCTGGCATTGCTTATGAATTGCAAGATGAGTTGC GTTGGTTCGAAGTAAGCACTCACCTTTTTAACTATCAACATATCATTGTAGGGTTAATTTCTCAAACTGGCCTTGATCAT CCACACATCAACATAGTATCACTCATTTATCTTTGAGTGTTGATGTCAAGACATTCAATTTTGGGTATCATTTAGTATAC ATACATATTAGTGGCAGTAATGTCTAATGTATATGTATATTCAATGTCATCCAAATTCAAATGTCAATCGAACATTTTTC GTTTATTTCTATTATACTCATATCTCTCTAGGACATGATTAAGATCTTATCTTAGTAAAGAATGACTTATTTCTCAATCC ATCAATAAATATGTTGGTAGAAAAGAAAATGAGTTATTTGGAGACATAATATCTTTTTTCACTCTCGATAGGAGTAGATA TGGGTTCCAACATAAATTTTTCCTTATACCCTTGCGAATTTATGGAATTTGGATTCTCACACTACAGTCTTTACATTTGT CAAATTCAAAATTTTGGCCAATTCAACTTTTTACAAATCAATCTGAATCATTTATCAGTCGCGAGTCTTGAACATGCTGA TGACCAACATTTAAGTGACACCTGCAAGTACTGGATGTTCATGGACGCCACAATTTACAACATGAAAAAATATATATAAA CATGTTTGTGGCGGTTTGAAGTGTTATGAATTGTATTTAACATTCTCCTGTAATTTATATGTAGCGAGTAAAGAAGATAA TTCCTCCTCACTTTGTGATGCATTGCGGGGAGGATAACCTGACAGCCAAGGAGCTATTCGAGATAGAGCATGCACAAATG CATGAAGAAGCACAAAATTGGATAAAAGAAACAGCCCAATCATGCTCCGCCGTTGCGGTTTTGGTGGCCACCGTAGTCTT CGCGGCGGCCTACACTATCCCAGGAGGAACTGACGCAAGAGGCTTCCCTTTATTCCTCCATTCACCGATGTTCCTCTTCT TCACCATCATGGATGTCGTGGCCCTCGCGAGCTCGCTTGCTTCTGTGGTGATGTTTCTCTCGATCCTGACTTCTCCGTTT GAAATGTGGGAGTTCTATAAGTCACTACCACGAAAACTCACGTTGGGTTTCTTTTTGTTGTTCTTCTCCTTGACCACCAC GATGTTGTCGTTTAGTGCCACAATTTTGCTCACAATTCGGTTGGAGTCGGACAAATGGAGTTCTAGTTTGATTTACAGTG CGGCATTTTTTCCCGTCTCTGTATTTGGATTGTTGCAGTTCCCGTTTTATATGGCAATCAAAGACAGACTGGTGCATTTT TTGAAGAGACTTAAGAAGTTAGTTCCACGCCGCTTGCTCAAGCTGATCGTGAAGTCTAAGAAAAGAAAATATCATTGATG TTGAGCGAAAAAAGGGTTGTCACATAACTTTTTTCTCTTCCATCTTATTTTCATTCATTTTATCTATTTATCTCTCTCTT CATTCTATGTTGCATTCCTATCATATCTCTTATTTTTCTCTATCTTGGTCTAAGTGTGGATGAAGTTAAACAAATACTCA TTATTTATTAATTAGTTAGTGCATGTTTAGATTT
CDS sequence (LotjaGi6g1v0289300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGCTGAGATAGAGACATCATCAGATAGTAGGTTCTACACATTTGATAGAAAAATGGAAATTCCTCAATGGGCTGC TATGAACGAAGATTGGAAAGCCTTCAAGGAATTCTTCCAGCAAGACAAGAAAGCTTTGCTTGAGCCCATGGACCTGAACC AAAGCACTGCCCTTCATGTTGCTACCCGCTCCAACAAACCGCAACAACTACTGGCAGAGTTGCTAGACATGCTGCCTGTC ACTGACCGGCGGCTCGCGCTGAGGCAGGGGACTGCTTACAAAAGCACTATTCTCCATGAAGCCGTCTCTTACTGCAGGAA GAATGTTGAAATTGTGGACATGTTGCTCAGGTACGATGTGGTGGTGCCGGCTGCAGATGGAGAAACTGGTGAACAAGAAG AAGAAAAGCAGGTTCCCCTGCTGGAGATGAAAAACTACTTAGGTGAGACTCCAGTTTACAGAGCAGCTAAGGTGGGGAAC CTGAGGATGCTCCAGCACTTGGCCAAACTTGTGCCGGACTTGCAATTGCATTTCATCAGAGATTCAGACAAGGCTCCAAT TCTTCACATTGCTATAATCACCCAACACTTAGATGTAGCTGTTTGGTTAATGAAAGTGCATGGGAAACTAGCTTATGAAA AGGACTCAAATGGATTAACTGGTCTTCAACTGCTATCCAATATGCCCTCTGTTTTCCTGAGCCATGCCAAGCTTGGAATC GCAAAGACTCTCATATACTCTATGCTTCCCGAACGCGATTATGAGTATGAAAATTATGATGAAAGCATTAAGGTCATCAG AGGAGGGATAGATTTAGAACATGGGAAAGAACATGCAAAGCAGCCACCAATCTCAGTGATTTCAAGGACCAACTACGCAT TTTGGAAATTTCTCTCACAAGAATGGGATGTGGTTGATCAATTTTGGAAGAAAAAGAAGCAGAACATGTTAGCAGAGCGT CTAACAGACTTGTTAGTACAGAAAGATGAATCATGGCACAGCACCTATATTGACAGTGGGAAAACAGTGGTGGTATTGCC AGTTATTAATCCGTCAAACGTGGCTGCAAGTAAACTAACTTACCAAGGGAAGGAACAACCTGGACAACAAAGCCAGAAAA CTTACAGTGCGTACACTCCATTGCTCTTGGCGGCGCGCAAGGGGATTGTGGAAATTGTGGATAAAATAATTGAGATGTAT CCAGAAGCTGTACATCATGTGAGCGAGGACGAGCTGAACGTGCTTCATGTGGTTGTGGCAAACCGTCAGATGAATGTTTA CCAGATATTTAAGAGGCAAGGTTTGTTGAGGTCGTTGGGTCAACTGATAAGCAAGAAAGGTCGCACTTTGTTGCACCAGG TGGGAAGGATAGAGTATTACAGAGGAGGTCAACAAGCTGGCATTGCTTATGAATTGCAAGATGAGTTGCGTTGGTTCGAA CGAGTAAAGAAGATAATTCCTCCTCACTTTGTGATGCATTGCGGGGAGGATAACCTGACAGCCAAGGAGCTATTCGAGAT AGAGCATGCACAAATGCATGAAGAAGCACAAAATTGGATAAAAGAAACAGCCCAATCATGCTCCGCCGTTGCGGTTTTGG TGGCCACCGTAGTCTTCGCGGCGGCCTACACTATCCCAGGAGGAACTGACGCAAGAGGCTTCCCTTTATTCCTCCATTCA CCGATGTTCCTCTTCTTCACCATCATGGATGTCGTGGCCCTCGCGAGCTCGCTTGCTTCTGTGGTGATGTTTCTCTCGAT CCTGACTTCTCCGTTTGAAATGTGGGAGTTCTATAAGTCACTACCACGAAAACTCACGTTGGGTTTCTTTTTGTTGTTCT TCTCCTTGACCACCACGATGTTGTCGTTTAGTGCCACAATTTTGCTCACAATTCGGTTGGAGTCGGACAAATGGAGTTCT AGTTTGATTTACAGTGCGGCATTTTTTCCCGTCTCTGTATTTGGATTGTTGCAGTTCCCGTTTTATATGGCAATCAAAGA CAGACTGGTGCATTTTTTGAAGAGACTTAAGAAGTTAGTTCCACGCCGCTTGCTCAAGCTGATCGTGAAGTCTAAGAAAA GAAAATATCATTGA
Protein sequence (LotjaGi6g1v0289300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKAEIETSSDSRFYTFDRKMEIPQWAAMNEDWKAFKEFFQQDKKALLEPMDLNQSTALHVATRSNKPQQLLAELLDMLPV TDRRLALRQGTAYKSTILHEAVSYCRKNVEIVDMLLRYDVVVPAADGETGEQEEEKQVPLLEMKNYLGETPVYRAAKVGN LRMLQHLAKLVPDLQLHFIRDSDKAPILHIAIITQHLDVAVWLMKVHGKLAYEKDSNGLTGLQLLSNMPSVFLSHAKLGI AKTLIYSMLPERDYEYENYDESIKVIRGGIDLEHGKEHAKQPPISVISRTNYAFWKFLSQEWDVVDQFWKKKKQNMLAER LTDLLVQKDESWHSTYIDSGKTVVVLPVINPSNVAASKLTYQGKEQPGQQSQKTYSAYTPLLLAARKGIVEIVDKIIEMY PEAVHHVSEDELNVLHVVVANRQMNVYQIFKRQGLLRSLGQLISKKGRTLLHQVGRIEYYRGGQQAGIAYELQDELRWFE RVKKIIPPHFVMHCGEDNLTAKELFEIEHAQMHEEAQNWIKETAQSCSAVAVLVATVVFAAAYTIPGGTDARGFPLFLHS PMFLFFTIMDVVALASSLASVVMFLSILTSPFEMWEFYKSLPRKLTLGFFLLFFSLTTTMLSFSATILLTIRLESDKWSS SLIYSAAFFPVSVFGLLQFPFYMAIKDRLVHFLKRLKKLVPRRLLKLIVKSKKRKYH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 526 | 526 | - | – | |
| PANTHER | 20 | 679 | 660 | 4.9E-132 | – | |
| PANTHER | 20 | 679 | 660 | 4.9E-132 | – | |
| Gene3D | 23 | 230 | 208 | 9.4E-17 | ||
| SUPERFAMILY | 25 | 436 | 412 | 3.59E-22 | ||
| SMART | 53 | 83 | 31 | 940.0 | ||
| ProSiteProfiles | 53 | 224 | 172 | 9.834 | ||
| SMART | 93 | 124 | 32 | 0.39 | ||
| SMART | 147 | 176 | 30 | 17.0 | ||
| SMART | 183 | 212 | 30 | 150.0 | ||
| Gene3D | 311 | 456 | 146 | 7.9E-6 | ||
| SMART | 376 | 406 | 31 | 1100.0 | ||
| Pfam | 518 | 628 | 111 | 6.1E-24 | ||
| TMHMM | 526 | 548 | 23 | - | – | |
| Phobius | 527 | 545 | 19 | - | – | |
| Phobius | 546 | 564 | 19 | - | – | |
| TMHMM | 563 | 585 | 23 | - | – | |
| Phobius | 565 | 588 | 24 | - | – | |
| Phobius | 589 | 608 | 20 | - | – | |
| TMHMM | 606 | 628 | 23 | - | – | |
| Phobius | 609 | 631 | 23 | - | – | |
| Phobius | 632 | 642 | 11 | - | – | |
| TMHMM | 643 | 665 | 23 | - | – | |
| Phobius | 643 | 665 | 23 | - | – | |
| Phobius | 666 | 697 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0289300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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