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LotjaGi6g1v0300700.1

Overview

Field Value
Gene ID LotjaGi6g1v0300700
Transcript ID LotjaGi6g1v0300700.1
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Glutamine synthetase; TAIR: AT5G35630.1 glutamine synthetase 2; Swiss-Prot: sp|Q9XQ94|GLNA2_MEDSA Glutamine synthetase leaf isozyme, chloroplastic; TrEMBL-Plants: tr|Q8GT61|Q8GT61_LOTJA Glutamine synthetase; Found in the gene: LotjaGi6g1v0300700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:61825877..61831138) extracted from Lotus japonicus Gifu genome v1.2.

ATCTAAACAACCTATAAACAATACCATGTTCAACAAGTTTTAACCTGATCATTATGATTATTATAAGAATCTTTACCATT GGCAATATCTTTGTGATTAAAAAAAAGGTAGCTGCCAATGCCACCATACCTTATCTAAATTGTTGTGAGTCCAAGCTTCT CTTGGTGGTCTTTAAGGGACCAAAAAGCATCTTCAACCACACATCACACACCCCTATCGATATTACAAAAGCCAATAGAT TTCTTTCAGTCTTTGCCCATCAACCCATATCTATCTCACACGAGTCTCTCCTACTACTATTCTTCACACTCTGCCTCAGG GTCTCTGACTCATACACGGGGCGCATTTTCACTTGAACTTAGTTCAAGTTTGCATCTTTAGCCATTTTTCCACTCTCTAC TGGTGAGTTTCGTAACCCCATTTCATTCAAACTTCCTGAGTTGGGATTGGTGCCATCAAGTTCTCTTTTTTATTTTTCTA CTGTCACTGTTAATTCTCTGCTCATTTTTCATTCATACTATGTTCTGAGTATGGATTGTTTTGTTTTTTTTTCTTGTTCT TTTCCATCTAATCTGATGTTATGCAATGTGCATCTTATAGAGTATAGTAATGACTCTGGCTGAAATGTTATGTAAGGTTT AAACAGGAAATTAAATTTTCAGTGCTTTGATCTGAAGTAGTCATTAATTTGAGTATAGTTGATATGATACTAATGTTCTT TTGTGCTTTATCTTAATGATGATATATAGGTGATGTTTTCATGTGTATATTTTGTTGAGAAATGACACAGATTTTAGTAC TTTTCAAGCACTGACTGAAATTGGTTTAACAAGGATTTGACAAGTGCTCTAGAATGATATTGTGTGTAGCTTCATTAGTC ATCATTTGAGAGTGGTTGCAAGATAGCTGATAGGCATTAAGAATTAAATCATCATCCTATTTAATTATTTTTGCTTAATT TGTTTAAATTTGAAATTTGAATCCTTTATTTGGTGGGGGTTCTCATGACTACTTTGTTTTGTAAGGAGCAGAACATGGCA CAGATTTTGGCACCCTCGACGCAATGGCAGACGAGAATCACCAAAACCTCTCCCAATGCAAGTCCCATTACATCAAACAT GTGGAGTTCTTTATTGTGGAAACAAAACAAGAAAGTTGCACGTGCTTCTAAGTTTAGAGTACTGGCAATCAAGTCTGATG GTAGCACCATCAACAGGCTAGAGGGTCTGCTTAATTTGGATGTCACTCCATACACTGATAAGTTCATTGCTGAGTACATC TGGTATTTCATTATATTCTTCTTTTTCTGTCTTTATCTCATAGTTTGCAAGATCAATTTTTCAATAACTATATCATTTTT TATCCTTCTATATGAGGATACTAGGTATTTAAAGCTGTGATACTTTTTTTGAAACAGGATTGGGGGGACTGGTGTCGATG TTCGCAGTAAATCAAGAGTATGTTATTTATAATGTGCAAAACTTACTATGAAAAAAACATTCCTACCATTGTTGTCATTT GATTTATCTCATGCTACTCATGACAATTCTATATATATATTTTTCAATTCTCAGACTATATCGAAGCCTGTTTCACATCC CTCTGAGCTCCCTAAATGGAACTATGATGGATCTAGCACTGGGCAGGCACCGGGCGATGATAGTGAAGTAATTCTATAGT AAGAATCTTTGTTCTGATACTTATATTAATGTTACTAATTACTGCATGCGGGCGCAGTTTTAATTTTAGTCTTTTTTTCC CGCAGTCCTCAAGCAATTTTCAGAGATCCTTTCCGTGGTGGTAACAATATTTTGGTAAGAGCTGTTATACTTGATATGGG TCTCATGGCATGTTGATTGAAATGGAAATACAGATATTATGAAGTTAATTTGAATTATTTTGTTTTGCAAAGGTTATTTG CGATGCTTACACACCACAAGGTGAGCCTATCCCTACAAACAAGCGGCACAGAGCTGCTGAAATCTTCAGTAACCCAAAGG TTCAAGCTGAAATTCCATGGTATATTATTTTACTCACTGTCTTTACAAAGATAACCACAATTTTGGGATGATAAATTGCA TGATCGAAGAATTAATTCATTTATTTAGGCTTAATATTACTAACTATTATCAGAAGCTAGAAAAATGTAACTTAGTATCT AACTGTTATGATAAACAAGCCTCTTCAATATATGGTGATTTATAGCGAACAAGAAAGATATATGATGACTAGTGATGCCA TGTAATATGCTGACATATATAGTACTTTTTGTCTAGTCTATGATACCTAACAAAATTAGATATTATATTCTTTTTTCCTT CTTCATATGATCACTCACTCAAATAGAAGATACTGAACTTTTGGTGTGGAATTATAATCTTAACAGAAGACATGCTGATG TTGTCTATTGATTGTTCAAAGGTATGGAATAGAACAAGAGTACACCCTACTTCAAACGGATGTGAAGTGGCCTTTGGGAT GGCCTGTTGGCGGCTATCCTGGTCCTCAGGTAATGTCACTTCTTGTGTTTTCTTTTCAGTTTTGTTCACATTGCAGGAAT TTGTGAATTTCATAAAGTGGATTTAATCAGGTGTTTCTTTATATATCAGGGTCCCTATTACTGTGCTGCCGGGGCTGATA AGTCATTCGGACGTGATATATCTGATGCTCATTACAAGGCTTGCTTGTATGCTGGAATCAACATCAGTGGCACCAATGGG GAGGTTATGCCTGGGCAGGTATATCTCTTGACAGCCAACTTCTTAAGGCTTATGAATGTATATGAAGTTTGAACTCAGTT TTTGTAACTATTTTTCTGTGAATATTGCAGTGGGAGTATCAAGTTGGTCCTAGTGTAGGTATTGAAGCTGGTGATCATAT CTGGGCTTCAAGGTACCTCCTTGAGGTAATTCATTTAACCTACTTTTGGTTTGTATATATGAAAAATTAACATGTTGAAA TAATCAGTGATGAAAACATGTCACTTTTTTTATTGCTGAATGAGTTTTTGGCACAATAATAATATCTTACTTTTGCTTGT ATGGTTCTTATTCATGTGCAGGTGCATTTTAAAAAGTGACTGTTTGCACTAAGCTTGATTTGATGATTTTATATTGTGTG TTTACATGAGAATTACAACATTTGCTTGTAGTTATGCAGAAGTATCAACATATAATTATTGTCATGTATCTATATTCTTT TCCTCTTTAGTTCTATCCTCTTCTTTCACAGTCGAAGAAATCAAAGATTGAATAGAATACACTACAAATTAGATATTTTT CCCTTTCAATCTATTTCTATACTATTCCTAAGTATCTGTTAAGTGTTAAGAATCTTAAGATCATGAAAGAAATTTTTGCA TTCTTAAGCTTATGGCATTTTGCTTGTTACTGAAAATTGTTGACTGTGTTTTGTGTAAAAACAATCTTGTGCATGTTCTC TTGCCCCTAATCCAATTTTGTATATTTAAATTCTAATTGAATATATTGCGTTTGTCTGTTCTGACAGAGAATCACTGAAC AAGCTGGTGTTGTCCTCACTCTTGATCCAAAACCAATTGAGGTACTATAATGCTTTAGGTTACATTGTTTCTTATACAGT GCTAATTATACTAATTGTTTTCGTTTTGAACTTGCTAGGGTGACTGGAACGGTGCCGGAGCCCACACCAATTACAGGTTT CTGTCCATGCCTTTGTCATGAATCATGATTGTATGTGTTTATCTTATTGACATGATAAATCACTAAGCTGATAAATATCA TTTGCTTTTAGCACAAAGAGCATGAGGGAAGAGGGAGGCTTTGAGGTAATCAAGAAGGCAATTTTGAATCTATCCCTTCG CCACCAGGACCATATTCGTGCTTATGGAGAAGGAAATGAGAGACGATTGACGGGAAAGCATGAAACAGCCGACATTAACA CATTTTCTTGGGTACTGTTTCATATTTTCCAATACCTATTCTTGTAAAAGACAGAGTATTCAAGCATAAAGTTTTTCTTC TTGTGTGAAACATCCTAATGAAGTTGATTGCAGGGAGTGGCTAACCGGGGTTGCTCAATCCGTGTGGGAAGAGACACAGA GAAGGAAGGAAAAGGTTAGTCACCACCAATAGTTCTACGGTTTGTTTAGAGGGTCTAGTTCAATGAACAGTACAAAATTA TAGAATTGACATGTTTGGATTAGCTTCTTTTATCTCATAATCAATTATGTAGCATTTTGTGCTTAACTGAATTAACTAGC TAAAAAAAATTGAGTAGCTTAAACATTTTGAATAATTGCAAATTTGCCAATGCAACACCTTGGCTTACCATCAGGCTTAT GGATTGGCATTGTGTTGCAAAATCACTTGCCTTTGTTTCCTAATAACTTTGTTTTTGCATCATGTTTATATTAGCTTTTG CTTCAATGGAATCAATTCTGAAATGCAGTAGCTACTCTTCTCTCCAGAATTGATTCTGACTTCAGAATCAATTGTAGAAG AATTTCCAAACATGCACTTAGGAAATTGCAATTACCATGTATTTGATTGTTTACCTTGCATATCCTCTTGATTGTAGGTT ACTTGGAAGACAGGCGCCCTGCTTCAAACATGGATCCATATGTTGTGACAGCATTGCTGGCAGAGACTACCTTGTTGTGG GAACCAACTCTAGAGGCTGAAGCTCTTGCAGCTCAGAAGATACAATTGAAGGTCTAAATCTATTGATTGATGGCATTCTT GATGGAGAGCACGTACACTTTCCTTTTAGATTATCTACATTCTGAAGATCTTGTTTGGACAAAAGAGGCTCCTATGCCCA GTTATTGATTGTCAAATGAAATGTGCACTGTATATCATAAATTCTGTTGGTTATGTTTGCATCTGGACAAACATTGATGC TTGGTTATATTTCAGTGTTCCTTCGGATTTGATTTTGTTCTTTTCCTAGAAGTAACTGAGGCTAAACCAAAAGAAATATA GCAAGCATTCCAATTTCACAATTTTTTTGGGAACCGGGACTACAACAATTAAAACTGAATATTCAAACCATATAAAGAAC ATGGGATATTCGACCCAAAAAGATAAAGTATGCATAGAAAAACTCCTGGTCCCCTTCATGAGTAGATATGAAAATGGTAT TTTCACACCTTTTTTTTTATCACTCGTACGTTTTTTTTCTTCTTCATATTTTATCACATCATGTCACATTATTCTCTCCA CACTTTCTCCTTTTATTTAAAGACTTATTCCGTGATAAAAATGGGTTTATTCTATAATAAAT
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0300700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCACAGATTTTGGCACCCTCGACGCAATGGCAGACGAGAATCACCAAAACCTCTCCCAATGCAAGTCCCATTACATC AAACATGTGGAGTTCTTTATTGTGGAAACAAAACAAGAAAGTTGCACGTGCTTCTAAGTTTAGAGTACTGGCAATCAAGT CTGATGGTAGCACCATCAACAGGCTAGAGGGTCTGCTTAATTTGGATGTCACTCCATACACTGATAAGTTCATTGCTGAG TACATCTGGATTGGGGGGACTGGTGTCGATGTTCGCAGTAAATCAAGAACTATATCGAAGCCTGTTTCACATCCCTCTGA GCTCCCTAAATGGAACTATGATGGATCTAGCACTGGGCAGGCACCGGGCGATGATAGTGAAGTAATTCTATATCCTCAAG CAATTTTCAGAGATCCTTTCCGTGGTGGTAACAATATTTTGGTTATTTGCGATGCTTACACACCACAAGGTGAGCCTATC CCTACAAACAAGCGGCACAGAGCTGCTGAAATCTTCAGTAACCCAAAGGTTCAAGCTGAAATTCCATGGTATGGAATAGA ACAAGAGTACACCCTACTTCAAACGGATGTGAAGTGGCCTTTGGGATGGCCTGTTGGCGGCTATCCTGGTCCTCAGGGTC CCTATTACTGTGCTGCCGGGGCTGATAAGTCATTCGGACGTGATATATCTGATGCTCATTACAAGGCTTGCTTGTATGCT GGAATCAACATCAGTGGCACCAATGGGGAGGTTATGCCTGGGCAGTGGGAGTATCAAGTTGGTCCTAGTGTAGGTATTGA AGCTGGTGATCATATCTGGGCTTCAAGGTACCTCCTTGAGAGAATCACTGAACAAGCTGGTGTTGTCCTCACTCTTGATC CAAAACCAATTGAGGGTGACTGGAACGGTGCCGGAGCCCACACCAATTACAGCACAAAGAGCATGAGGGAAGAGGGAGGC TTTGAGGTAATCAAGAAGGCAATTTTGAATCTATCCCTTCGCCACCAGGACCATATTCGTGCTTATGGAGAAGGAAATGA GAGACGATTGACGGGAAAGCATGAAACAGCCGACATTAACACATTTTCTTGGGGAGTGGCTAACCGGGGTTGCTCAATCC GTGTGGGAAGAGACACAGAGAAGGAAGGAAAAGGTTACTTGGAAGACAGGCGCCCTGCTTCAAACATGGATCCATATGTT GTGACAGCATTGCTGGCAGAGACTACCTTGTTGTGGGAACCAACTCTAGAGGCTGAAGCTCTTGCAGCTCAGAAGATACA ATTGAAGGTCTAA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0300700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAQILAPSTQWQTRITKTSPNASPITSNMWSSLLWKQNKKVARASKFRVLAIKSDGSTINRLEGLLNLDVTPYTDKFIAE YIWIGGTGVDVRSKSRTISKPVSHPSELPKWNYDGSSTGQAPGDDSEVILYPQAIFRDPFRGGNNILVICDAYTPQGEPI PTNKRHRAAEIFSNPKVQAEIPWYGIEQEYTLLQTDVKWPLGWPVGGYPGPQGPYYCAAGADKSFGRDISDAHYKACLYA GINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWASRYLLERITEQAGVVLTLDPKPIEGDWNGAGAHTNYSTKSMREEGG FEVIKKAILNLSLRHQDHIRAYGEGNERRLTGKHETADINTFSWGVANRGCSIRVGRDTEKEGKGYLEDRRPASNMDPYV VTALLAETTLLWEPTLEAEALAAQKIQLKV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR20852
26 430 405 1.1E-248 –
PANTHER
PTHR20852:SF84
26 430 405 1.1E-248 –
Gene3D
G3DSA:3.10.20.70
59 161 103 2.9E-43
IPR036651
SUPERFAMILY
SSF54368
78 160 83 1.7E-18
IPR036651
Pfam
PF03951
80 155 76 7.3E-10
IPR008147
ProSitePatterns
PS00180
113 130 18 -
IPR027302
SUPERFAMILY
SSF55931
161 411 251 1.08E-67
IPR014746
SMART
SM01230
161 409 249 5.2E-57
IPR008146
Gene3D
G3DSA:3.30.590.40
162 414 253 2.4E-130 –
Pfam
PF00120
185 313 129 1.8E-10
IPR008146
ProSitePatterns
PS00181
295 311 17 -
IPR027303

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004356
Molecular function Glutamate-ammonia ligase activity Catalysis of the reaction: L-glutamate + ATP + NH(3) = L-glutamine + ADP + 2 H(+) + phosphate.
Subterm of
GO:0006542
Biological process Glutamine biosynthetic process The chemical reactions and pathways resulting in the formation of glutamine, 2-amino-4-carbamoylbutanoic acid.
Subterm of
GO:0006807
Biological process Nitrogen compound metabolic process The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0300700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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