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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0303900 |
| Transcript ID | LotjaGi6g1v0303900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histidine phosphotransfer protein; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|I3SSQ4|I3SSQ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0303900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:62134029..62136202) extracted from Lotus japonicus Gifu genome v1.2.
AACTCTATTGCTTAAAATGTGCGCTAACGTGGGTTGAAAATGTACCTAAACACGTGTAGTTAGAAATCCTGGTTGAATAA AATTAAGAGATGTTGCTTGCACAAGCAGGCAAGCAGCCATTTCATAGGATGATCATATGATTAAAAACTTGCATGAATTG TCAAATTTACATGAATTGCTTATGATTGTCAATGCTCTTAAAACTTGTATATTTATGTTAAAATTGTGTTTTAACTCATG TGAATTGCAAACTAGACACATGCAAAGCAAGTGGGAATAATGGTGGGGTCCTGAGTTTGCAGAGGAGAGGAGGAATAAAA ACGGTGTCACTCATTCACACACTCTCTTCCGGGGCCAGACCAAACAAACGAATACACAAACACCAACACCAACACCAACA TTGATCTTTGTTCCACTGCCCTCTAATCAAAGGTACTTCCTTCATCTCTTTCACTCTTTCATTCAGCTATAATTTCCTTA AAGATCTAAACTTGTAGCACAAAAATCAACTGGGTCACACTGTTTCTGTAACATAACAAGAAACAGCTTGTGCTGTCTGT GTGTGAAAACAGGGAAACATAGGCAAAAACAACATGGACGCGGGTCAGATGAAGAGACAGTGGGTGGACTACATCAAATC CCTGTTTGTGGAGGTAAGGCAAATAAGACAGTGTGACAAAATATATTGTTTTTTCTTTTATGGGATTGTGATTGTTAGAT GTTGGGGGTGTGTTGTTTTCCATTGTTTGATTTGGTGGGTGTTCTTCTTTGTTGTCTTCTTAAGGGCTTCCTGGATGGTC AGTTTCTGCAACTTCAGCAGCTCCAAGATGAGAACAACCCTGAGTTTGTGGTTGAAGTGGTGTCTCTCTTTTTTGAAGAT TCTGAGAGGCTTCTCAAAGATCTCTCTTTTGCTCTGTGAGTATTATCCTTGTTTAAATGTTTCCCTTGATCTTTACTAGT TAGTCCATGTTTGGAAATTATTGTACAATTGATTTTAGAGTGAAAATCAATTATGGGAGAAGCTTATGTTAGTGCCATAA TTGATTTAGAAAAAAATAAGTCCATGATACAATCATGCTTATAGAATGCTGGTTATTAGACATTTGCTCTTAATTGATGG CTGGAACATTTGCATGATTTTTTTTCCATGTTCTTGGGATTTTTCCTGTGCAGAGAGCAGAAAGGTGTTGACTTCAAAAA AGTTGATGCTCACGTTCATCAGTTAAAGGGTAGCAGCTCAAGGTATACAATTTTATTAAAGCAAGCAAATAATGTAAAAA ACCTACAGAATCTGAATGAATAGGACTTTTTGTGCCATACCAGCTATGCTTGTGTAGCTGTAGATTCTTAAACGAGTAGT GTTTTTTCTCTGAAAATCACAGTAGACTAATCAAGCTTTACAGCTGAACCTTAATTAAGAAAAATTAAAAAGTAATACAA CTTTGTTTAATGTTAAACTTTGTTAGTCTGTTGCATTGTCTTGGTACTGAATCAAATTTGTTTGTCTTATGCACAGCATT GGGGCACAAAGGGTAAAAAATGCCTGCATTGCTTTTCGCAACTTCTGTGAGGAACAGAACACAGACGCGTGAGTATTTAA TCTTCAATTTTCAGATAACTTGTTTGATAATTTTGGTCTCCTGAAGAATTAAAAATGAGTGCAGAAGTTTGAATGACAAA GCTAGTTCATGGTCTGATCATGGAAAATTCTAATTGGTGCAGGTGCCTCAGGTGTCTGCAACAAGTGAAGCAAGAGTACT GCCTTGTCAAGAATAAGCTTGAAACACTTATCAGGGTAACTAGATAAAAAAACTTTTAGCTTAAGCACATTCCAATATTC TGGATTTGTTACTTATATTTGTTTCGTGGACAATTATTGCAGCTTGAGCAACAGATTGTGGCAGCTGGTGGATCAATCCC CATGATGGAACTGAGTTTCTAAGCAGATGGATTTGTAGAGAGGCTTCTATTGTGATCCTCTTCTCTGTTTTATCCTTTTT TATCTTATGTCCCTAGTACATGTATGGATTTTTATGAGAAGAGAAGTTTTCATCCAATGTACCTTTTTCTTCACTAGAAA GCACTTCATAATTTGTAATCTCTTGCATACTTATGAAGGTTGATAGCACCTCTAATGAAGTTGCTTCTTTTTCTCTAACT CGAAAACTAAGAAA
CDS sequence (LotjaGi6g1v0303900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGCGGGTCAGATGAAGAGACAGTGGGTGGACTACATCAAATCCCTGTTTGTGGAGGGCTTCCTGGATGGTCAGTT TCTGCAACTTCAGCAGCTCCAAGATGAGAACAACCCTGAGTTTGTGGTTGAAGTGGTGTCTCTCTTTTTTGAAGATTCTG AGAGGCTTCTCAAAGATCTCTCTTTTGCTCTAGAGCAGAAAGGTGTTGACTTCAAAAAAGTTGATGCTCACGTTCATCAG TTAAAGGGTAGCAGCTCAAGCATTGGGGCACAAAGGGTAAAAAATGCCTGCATTGCTTTTCGCAACTTCTGTGAGGAACA GAACACAGACGCGTGCCTCAGGTGTCTGCAACAAGTGAAGCAAGAGTACTGCCTTGTCAAGAATAAGCTTGAAACACTTA TCAGGCTTGAGCAACAGATTGTGGCAGCTGGTGGATCAATCCCCATGATGGAACTGAGTTTCTAA
Protein sequence (LotjaGi6g1v0303900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDAGQMKRQWVDYIKSLFVEGFLDGQFLQLQQLQDENNPEFVVEVVSLFFEDSERLLKDLSFALEQKGVDFKKVDAHVHQ LKGSSSSIGAQRVKNACIAFRNFCEEQNTDACLRCLQQVKQEYCLVKNKLETLIRLEQQIVAAGGSIPMMELSF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 152 | 152 | 4.1E-88 | – | |
| PANTHER | 1 | 152 | 152 | 4.1E-88 | – | |
| Gene3D | 1 | 154 | 154 | 2.4E-61 | ||
| SUPERFAMILY | 5 | 140 | 136 | 4.19E-39 | ||
| ProSiteProfiles | 38 | 143 | 106 | 14.622 | ||
| CDD | 44 | 123 | 80 | 3.07194E-14 | ||
| Pfam | 44 | 122 | 79 | 4.5E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. |
Expression pattern of LotjaGi6g1v0303900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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